RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-208ENST00000561726 NME8Q8N427 588 aa4.54□□□□□ -1.68
TNRC6A-208ENST00000561726 TMEM87AQ8NBN3 555 aa4.54□□□□□ -1.68
TNRC6A-208ENST00000561726 FBXO15Q8NCQ5 510 aaPredicted RBP4.54□□□□□ -1.68
TNRC6A-208ENST00000561726 PPP1R16BQ96T49 567 aa4.54□□□□□ -1.68
TNRC6A-208ENST00000561726 IRF2BPLQ9H1B7 796 aa4.54□□□□□ -1.68
TNRC6A-208ENST00000561726 OSBPL2Q9H1P3 480 aa4.54□□□□□ -1.68
TNRC6A-208ENST00000561726 C19orf44Q9H6X5 657 aa4.54□□□□□ -1.68
TNRC6A-208ENST00000561726 PCDH12Q9NPG4 1184 aa4.54□□□□□ -1.68
TNRC6A-208ENST00000561726 S100BP04271 92 aaPredicted RBP4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 CFPP27918 469 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 GBP1P32455 592 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 RBL2Q08999 1139 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 BMS1Q14692 1282 aaKnown RBP4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 TIGD5Q53EQ6 642 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 LDLRAD1Q5T700 205 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 FILIP1Q7Z7B0 1213 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 RNF34Q969K3 372 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 VWCEQ96DN2 955 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 GMLQ99445 158 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 ASPNQ9BXN1 380 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 RNF32Q9H0A6 362 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 ACBD3Q9H3P7 528 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 BRMS1Q9HCU9 246 aa4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 DCP1AQ9NPI6 582 aaPredicted RBP4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 G3BP2Q9UN86 482 aaKnown RBP4.53□□□□□ -1.68
TNRC6A-208ENST00000561726 SLC22A31A6NKX4 558 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 PAX3P23760 479 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 EIF4A3P38919 411 aaKnown RBP4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 TEKQ02763 1124 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 CWF19L2Q2TBE0 894 aaKnown RBP4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 C4orf46Q504U0 113 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 FBLN7Q53RD9 439 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 ARSHQ5FYA8 562 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 ZFYVE27Q5T4F4 411 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 ANKLE2Q86XL3 938 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 C1QL4Q86Z23 238 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 PDZD8Q8NEN9 1154 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 TOX2Q96NM4 488 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 EPB41L4BQ9H329 900 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 METTL5Q9NRN9 209 aaKnown RBP4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 IFT57Q9NWB7 429 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 EBF1Q9UH73 591 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 PCDHB14Q9Y5E9 798 aa4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 MRPL42Q9Y6G3 142 aaKnown RBP4.52□□□□□ -1.69
TNRC6A-208ENST00000561726 NFIBO00712 420 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 RGS13O14921 159 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 GREM1O60565 184 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 UBOX5O94941 541 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 TMEM253P0C7T8 217 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 POLR2BP30876 1174 aaKnown RBP4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 CRKP46108 304 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 TBX4P57082 545 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 RHBDL3P58872 404 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 FANCCQ00597 558 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 CLEC16AQ2KHT3 1053 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 TSHZ1Q6ZSZ6 1077 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 LRRC56Q8IYG6 542 aaPredicted RBP4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 RPUSD2Q8IZ73 545 aaKnown RBP4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 FAM9BQ8IZU0 186 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 OXR1Q8N573 874 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 KCNQ5Q9NR82 932 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 DDX56Q9NY93 547 aaKnown RBP4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 PNMA2Q9UL42 364 aa4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 SUPT16HQ9Y5B9 1047 aaKnown RBP4.51□□□□□ -1.69
TNRC6A-208ENST00000561726 FITM1A5D6W6 292 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 ETV2O00321 342 aaPredicted RBP4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 DNAJC6O75061 913 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 STK10O94804 968 aaKnown RBP4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 RAG1P15918 1043 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 ZNF76P36508 570 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 ITGAEP38570 1179 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 GALK1P51570 392 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 CHMP4BP1P59074 171 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 ARID5AQ03989 594 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 FOXD4Q12950 439 aaPredicted RBP4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 BIRC2Q13490 618 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 MLECQ14165 292 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 ATG14Q6ZNE5 492 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 LCNL1Q6ZST4 164 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 LILRA2Q8N149 483 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 ZNF296Q8WUU4 475 aaPredicted RBP4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 SYTL4Q96C24 671 aaPredicted RBP4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 MRFAP1L1Q96HT8 127 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 LRRC3Q9BY71 257 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 UBP1Q9NZI7 540 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 GMIPQ9P107 970 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 ADAMTS1Q9UHI8 967 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 GGT7Q9UJ14 662 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 ROBO2Q9HCK4 1378 aa4.5□□□□□ -1.69
TNRC6A-208ENST00000561726 NPIPB6E9PJ23 425 aa4.49□□□□□ -1.69
TNRC6A-208ENST00000561726 PRC1O43663 620 aa4.49□□□□□ -1.69
TNRC6A-208ENST00000561726 ATE1O95260 518 aa4.49□□□□□ -1.69
TNRC6A-208ENST00000561726 CLCQ05315 142 aa4.49□□□□□ -1.69
TNRC6A-208ENST00000561726 NMIQ13287 307 aaPredicted RBP4.49□□□□□ -1.69
TNRC6A-208ENST00000561726 SNW1Q13573 536 aaKnown RBP4.49□□□□□ -1.69
TNRC6A-208ENST00000561726 NFE2L2Q16236 605 aa4.49□□□□□ -1.69
TNRC6A-208ENST00000561726 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
TNRC6A-208ENST00000561726 SEZ6Q53EL9 994 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms