RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 FEM1BQ9UK73 627 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 ABT1Q9ULW3 272 aaKnown RBP14.69□□□□□ -0.06
CMTM4-203ENST00000561680 SMC3Q9UQE7 1217 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 LCTP09848 1927 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 PRPF3O43395 683 aaKnown RBP14.68□□□□□ -0.06
CMTM4-203ENST00000561680 DTNBO60941 627 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 PPFIA3O75145 1194 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 FDPSP14324 419 aaKnown RBP14.68□□□□□ -0.06
CMTM4-203ENST00000561680 GJB2P29033 226 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 SLC16A2P36021 539 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 GTF2A2P52657 109 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 SYDE2Q5VT97 1194 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 GADL1Q6ZQY3 521 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 FASTKD5Q7L8L6 764 aaKnown RBP14.68□□□□□ -0.06
CMTM4-203ENST00000561680 TRIM22Q8IYM9 498 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 CCDC82Q8N4S0 544 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 SPRYD3Q8NCJ5 442 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 CHURC1Q8WUH1 139 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 MTMR8Q96EF0 704 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 TANGO6Q9C0B7 1094 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 CREBZFQ9NS37 354 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 RBM27Q9P2N5 1060 aaKnown RBP14.68□□□□□ -0.06
CMTM4-203ENST00000561680 ORC3Q9UBD5 711 aaPredicted RBP14.68□□□□□ -0.06
CMTM4-203ENST00000561680 AGTPBP1Q9UPW5 1226 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 PLXNB2O15031 1838 aa14.68□□□□□ -0.06
CMTM4-203ENST00000561680 PLXNA1Q9UIW2 1896 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 DOCK3Q8IZD9 2030 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 FAM155AB1AL88 458 aaPredicted RBP14.67□□□□□ -0.06
CMTM4-203ENST00000561680 CETPP11597 493 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 IKQ13123 557 aaPredicted RBP14.67□□□□□ -0.06
CMTM4-203ENST00000561680 TREML2Q5T2D2 321 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 CATSPERGQ6ZRH7 1159 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 ADGRF4Q8IZF3 695 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 DDX11Q96FC9 970 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 SLF1Q9BQI6 1058 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 JMJD4Q9H9V9 463 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 FBXO28Q9NVF7 368 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 PRR12Q9ULL5 1215 aa14.67□□□□□ -0.06
CMTM4-203ENST00000561680 MYPNQ86TC9 1320 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 CCL15-CCL14A0A0B4J2E2 113 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 USP17L15C9J2P7 530 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 USP17L13C9JLJ4 530 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 USP17L11C9JVI0 530 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 USP17L18D6R9N7 530 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 USP17L22D6RA61 530 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 USP17L17D6RBQ6 530 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 USP17L19D6RCP7 530 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 USP17L20D6RJB6 530 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 FLOT1O75955 427 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 DEXIO95424 95 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 HOXA7P31268 230 aaPredicted RBP14.66□□□□□ -0.06
CMTM4-203ENST00000561680 AKAP17AQ02040 695 aaKnown RBP14.66□□□□□ -0.06
CMTM4-203ENST00000561680 USP17L24Q0WX57 530 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 MKRN3Q13064 507 aaKnown RBP14.66□□□□□ -0.06
CMTM4-203ENST00000561680 PKN1Q16512 942 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 CCL15Q16663 113 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 GPAT2Q6NUI2 795 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 CCDC102AQ96A19 550 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 RRP36Q96EU6 259 aaKnown RBP14.66□□□□□ -0.06
CMTM4-203ENST00000561680 CWC22Q9HCG8 908 aaKnown RBP14.66□□□□□ -0.06
CMTM4-203ENST00000561680 PPP1R9AQ9ULJ8 1098 aa14.66□□□□□ -0.06
CMTM4-203ENST00000561680 hCG_1642624A0A1W2PR95 340 aa14.65□□□□□ -0.06
CMTM4-203ENST00000561680 TESPA1A2RU30 521 aaPredicted RBP14.65□□□□□ -0.06
CMTM4-203ENST00000561680 RASSF10A6NK89 507 aa14.65□□□□□ -0.06
CMTM4-203ENST00000561680 DDIT3P35638 169 aa14.65□□□□□ -0.06
CMTM4-203ENST00000561680 CDC37Q16543 378 aaPredicted RBP14.65□□□□□ -0.06
CMTM4-203ENST00000561680 PFKFB3Q16875 520 aaPredicted RBP14.65□□□□□ -0.06
CMTM4-203ENST00000561680 PRPF38AQ8NAV1 312 aaKnown RBP14.65□□□□□ -0.06
CMTM4-203ENST00000561680 BRI3BPQ8WY22 251 aa14.65□□□□□ -0.06
CMTM4-203ENST00000561680 WASF1Q92558 559 aa14.65□□□□□ -0.06
CMTM4-203ENST00000561680 KIFC2Q96AC6 838 aa14.65□□□□□ -0.06
CMTM4-203ENST00000561680 PIGSQ96S52 555 aa14.65□□□□□ -0.06
CMTM4-203ENST00000561680 RANBP17Q9H2T7 1088 aaKnown RBP14.65□□□□□ -0.06
CMTM4-203ENST00000561680 SEC63Q9UGP8 760 aaKnown RBP14.65□□□□□ -0.06
CMTM4-203ENST00000561680 SLC45A1Q9Y2W3 748 aa14.65□□□□□ -0.06
CMTM4-203ENST00000561680 KIF3AQ9Y496 699 aa14.65□□□□□ -0.06
CMTM4-203ENST00000561680 V9GY48 417 aaPredicted RBP14.65□□□□□ -0.06
CMTM4-203ENST00000561680 PNMA6FA0A0J9YX94 578 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 MANSC4A6NHS7 340 aaPredicted RBP14.64□□□□□ -0.07
CMTM4-203ENST00000561680 SPDYE16A6NNV3 312 aaPredicted RBP14.64□□□□□ -0.07
CMTM4-203ENST00000561680 ZBTB5O15062 677 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 SCG2P13521 617 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 DSG3P32926 999 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 PABPC4Q13310 644 aaKnown RBP eCLIP14.64□□□□□ -0.07
CMTM4-203ENST00000561680 QRICH1Q2TAL8 776 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 ANKRD23Q86SG2 305 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 HOMER1Q86YM7 354 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 FAM184AQ8NB25 1140 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 PIBF1Q8WXW3 757 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 AIFM3Q96NN9 605 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 ALG1Q9BT22 464 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 VAT1LQ9HCJ6 419 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 ADAMTS5Q9UNA0 930 aa14.64□□□□□ -0.07
CMTM4-203ENST00000561680 BTBD19C9JJ37 291 aa14.63□□□□□ -0.07
CMTM4-203ENST00000561680 hCG_1984214I3L0E3 225 aa14.63□□□□□ -0.07
CMTM4-203ENST00000561680 FDX1P10109 184 aa14.63□□□□□ -0.07
CMTM4-203ENST00000561680 COG2Q14746 738 aa14.63□□□□□ -0.07
CMTM4-203ENST00000561680 LBX2Q6XYB7 198 aa14.63□□□□□ -0.07
CMTM4-203ENST00000561680 ZNF713Q8N859 430 aaPredicted RBP14.63□□□□□ -0.07
CMTM4-203ENST00000561680 ATG4CQ96DT6 458 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms