RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 SLC4A3P48751 1232 aa22.02■■□□□ 1.12
COMMD4-204ENST00000561662 SLFNL1Q499Z3 407 aa22.02■■□□□ 1.12
COMMD4-204ENST00000561662 CCSAPQ6IQ19 270 aaPredicted RBP22.02■■□□□ 1.12
COMMD4-204ENST00000561662 ARMT1Q9H993 441 aa22.02■■□□□ 1.12
COMMD4-204ENST00000561662 CXXC1Q9P0U4 656 aaPredicted RBP22.02■■□□□ 1.12
COMMD4-204ENST00000561662 ZNF532Q9HCE3 1301 aa22.02■■□□□ 1.12
COMMD4-204ENST00000561662 CHD7Q9P2D1 2997 aa22.02■■□□□ 1.11
COMMD4-204ENST00000561662 REV3LO60673 3130 aa22.02■■□□□ 1.11
COMMD4-204ENST00000561662 ADCY6O43306 1168 aa22.01■■□□□ 1.11
COMMD4-204ENST00000561662 PRKAB2O43741 272 aa22.01■■□□□ 1.11
COMMD4-204ENST00000561662 C6orf222P0C671 652 aaPredicted RBP22.01■■□□□ 1.11
COMMD4-204ENST00000561662 RASIP1Q5U651 963 aa22.01■■□□□ 1.11
COMMD4-204ENST00000561662 SH2D4AQ9H788 454 aa22.01■■□□□ 1.11
COMMD4-204ENST00000561662 FAM184BQ9ULE4 1060 aa22.01■■□□□ 1.11
COMMD4-204ENST00000561662 ADAMTS5Q9UNA0 930 aa22.01■■□□□ 1.11
COMMD4-204ENST00000561662 DIS3Q9Y2L1 958 aaKnown RBP22.01■■□□□ 1.11
COMMD4-204ENST00000561662 YBX2Q9Y2T7 364 aaKnown RBP22.01■■□□□ 1.11
COMMD4-204ENST00000561662 NOP58Q9Y2X3 529 aaKnown RBP22.01■■□□□ 1.11
COMMD4-204ENST00000561662 NCOR1O75376 2440 aa22.01■■□□□ 1.11
COMMD4-204ENST00000561662 TCF20Q9UGU0 1960 aaKnown RBP22.01■■□□□ 1.11
COMMD4-204ENST00000561662 MOXD2PA6NHM9 499 aa22■■□□□ 1.11
COMMD4-204ENST00000561662 ASGR1P07306 291 aa22■■□□□ 1.11
COMMD4-204ENST00000561662 EEF2P13639 858 aaKnown RBP22■■□□□ 1.11
COMMD4-204ENST00000561662 CYP2C18P33260 490 aa22■■□□□ 1.11
COMMD4-204ENST00000561662 FAM83BQ5T0W9 1011 aa22■■□□□ 1.11
COMMD4-204ENST00000561662 TMEM199Q8N511 208 aa22■■□□□ 1.11
COMMD4-204ENST00000561662 GLT1D1Q96MS3 346 aa22■■□□□ 1.11
COMMD4-204ENST00000561662 MSRAQ9UJ68 235 aa22■■□□□ 1.11
COMMD4-204ENST00000561662 ZNF214Q9UL59 606 aaPredicted RBP22■■□□□ 1.11
COMMD4-204ENST00000561662 CDK7P50613 346 aa21.99■■□□□ 1.11
COMMD4-204ENST00000561662 TFF2Q03403 129 aa21.99■■□□□ 1.11
COMMD4-204ENST00000561662 CCDC174Q6PII3 467 aa21.99■■□□□ 1.11
COMMD4-204ENST00000561662 REPS2Q8NFH8 660 aa21.99■■□□□ 1.11
COMMD4-204ENST00000561662 DNAJC2Q99543 621 aaKnown RBP21.99■■□□□ 1.11
COMMD4-204ENST00000561662 NUP88Q99567 741 aaPredicted RBP21.99■■□□□ 1.11
COMMD4-204ENST00000561662 SWAP70Q9UH65 585 aa21.99■■□□□ 1.11
COMMD4-204ENST00000561662 PPP1R9AQ9ULJ8 1098 aa21.99■■□□□ 1.11
COMMD4-204ENST00000561662 EXOC6BQ9Y2D4 811 aa21.99■■□□□ 1.11
COMMD4-204ENST00000561662 GOLIM4O00461 696 aa21.98■■□□□ 1.11
COMMD4-204ENST00000561662 CDK8P49336 464 aa21.98■■□□□ 1.11
COMMD4-204ENST00000561662 IL1RAPL2Q9NP60 686 aa21.98■■□□□ 1.11
COMMD4-204ENST00000561662 RIPK3Q9Y572 518 aa21.98■■□□□ 1.11
COMMD4-204ENST00000561662 BDP1A6H8Y1 2624 aa21.98■■□□□ 1.11
COMMD4-204ENST00000561662 MYH8P13535 1937 aa21.98■■□□□ 1.11
COMMD4-204ENST00000561662 TCRBV5S4A2TA0A5A2 114 aa21.97■■□□□ 1.11
COMMD4-204ENST00000561662 ARVCFO00192 962 aa21.97■■□□□ 1.11
COMMD4-204ENST00000561662 RABGGTBP53611 331 aa21.97■■□□□ 1.11
COMMD4-204ENST00000561662 SNRNP48Q6IEG0 339 aaKnown RBP21.97■■□□□ 1.11
COMMD4-204ENST00000561662 PSRC1Q6PGN9 363 aaPredicted RBP21.97■■□□□ 1.11
COMMD4-204ENST00000561662 DDX11Q96FC9 970 aa21.97■■□□□ 1.11
COMMD4-204ENST00000561662 SLC28A3Q9HAS3 691 aa21.97■■□□□ 1.11
COMMD4-204ENST00000561662 ELP1O95163 1332 aa21.97■■□□□ 1.11
COMMD4-204ENST00000561662 UMODL1Q5DID0 1318 aa21.97■■□□□ 1.11
COMMD4-204ENST00000561662 MROH7Q68CQ1 1323 aa21.97■■□□□ 1.11
COMMD4-204ENST00000561662 A0A0U1RQG5 324 aaPredicted RBP21.96■■□□□ 1.11
COMMD4-204ENST00000561662 DUSP11O75319 330 aaKnown RBP21.96■■□□□ 1.11
COMMD4-204ENST00000561662 MYOGP15173 224 aa21.96■■□□□ 1.11
COMMD4-204ENST00000561662 RAB30Q15771 203 aa21.96■■□□□ 1.11
COMMD4-204ENST00000561662 OTOP2Q7RTS6 562 aa21.96■■□□□ 1.11
COMMD4-204ENST00000561662 FAM126BQ8IXS8 530 aa21.96■■□□□ 1.11
COMMD4-204ENST00000561662 SYNGAP1Q96PV0 1343 aa21.96■■□□□ 1.11
COMMD4-204ENST00000561662 MBD4O95243 580 aa21.95■■□□□ 1.1
COMMD4-204ENST00000561662 KCNQ1P51787 676 aa21.95■■□□□ 1.1
COMMD4-204ENST00000561662 ACVR2BQ13705 512 aa21.95■■□□□ 1.1
COMMD4-204ENST00000561662 TTF1Q15361 905 aaPredicted RBP21.95■■□□□ 1.1
COMMD4-204ENST00000561662 CCDC144BQ3MJ40 725 aa21.95■■□□□ 1.1
COMMD4-204ENST00000561662 GNASQ5JWF2 1037 aa21.95■■□□□ 1.1
COMMD4-204ENST00000561662 GOPCQ9HD26 462 aa21.95■■□□□ 1.1
COMMD4-204ENST00000561662 IL23AQ9NPF7 189 aa21.95■■□□□ 1.1
COMMD4-204ENST00000561662 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.95■■□□□ 1.1
COMMD4-204ENST00000561662 BAZ2AQ9UIF9 1905 aaKnown RBP21.95■■□□□ 1.1
COMMD4-204ENST00000561662 GBF1Q92538 1859 aa21.94■■□□□ 1.1
COMMD4-204ENST00000561662 CHGBP05060 677 aa21.94■■□□□ 1.1
COMMD4-204ENST00000561662 BEX3Q00994 111 aa21.94■■□□□ 1.1
COMMD4-204ENST00000561662 SKIV2LQ15477 1246 aaKnown RBP21.94■■□□□ 1.1
COMMD4-204ENST00000561662 ITPRIPQ8IWB1 547 aa21.94■■□□□ 1.1
COMMD4-204ENST00000561662 CPXCR1Q8N123 301 aa21.94■■□□□ 1.1
COMMD4-204ENST00000561662 PCSK9Q8NBP7 692 aaKnown RBP21.94■■□□□ 1.1
COMMD4-204ENST00000561662 HERVK_113Q902F9 699 aa21.94■■□□□ 1.1
COMMD4-204ENST00000561662 USP17L12C9JPN9 530 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 USP17L21D6R901 530 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 TLR3O15455 904 aaKnown RBP21.93■■□□□ 1.1
COMMD4-204ENST00000561662 FGBP02675 491 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 PTGS1P23219 599 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 CST5P28325 142 aaPredicted RBP21.93■■□□□ 1.1
COMMD4-204ENST00000561662 CCL23P55773 120 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 C12orf60Q5U649 245 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 ZKSCAN2Q63HK3 967 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 TMED8Q6PL24 325 aaPredicted RBP21.93■■□□□ 1.1
COMMD4-204ENST00000561662 MAMDC4Q6UXC1 1216 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 STK11IPQ8N1F8 1099 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 CCDC17Q96LX7 622 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 SLF1Q9BQI6 1058 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 TEX13BQ9BXU2 312 aa21.93■■□□□ 1.1
COMMD4-204ENST00000561662 SUPT16HQ9Y5B9 1047 aaKnown RBP21.93■■□□□ 1.1
COMMD4-204ENST00000561662 DNAJC25-GNG10A0A024R161 153 aa21.92■■□□□ 1.1
COMMD4-204ENST00000561662 BMP1P13497 986 aa21.92■■□□□ 1.1
COMMD4-204ENST00000561662 COPB2P35606 906 aa21.92■■□□□ 1.1
COMMD4-204ENST00000561662 PPP2R2DQ66LE6 453 aa21.92■■□□□ 1.1
COMMD4-204ENST00000561662 MSL3Q8N5Y2 521 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms