RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 PAGR1Q9BTK6 254 aa19.1■□□□□ 0.65
USB1-204ENST00000561568 AGXT2Q9BYV1 514 aa19.1■□□□□ 0.65
USB1-204ENST00000561568 PRDM10Q9NQV6 1147 aa19.1■□□□□ 0.65
USB1-204ENST00000561568 FRMPD2Q68DX3 1309 aaPredicted RBP19.09■□□□□ 0.65
USB1-204ENST00000561568 KIF5BP33176 963 aa19.09■□□□□ 0.65
USB1-204ENST00000561568 ERVK-9P63128 1117 aa19.09■□□□□ 0.65
USB1-204ENST00000561568 ERVK-24P63145 666 aa19.09■□□□□ 0.65
USB1-204ENST00000561568 Q3C1V9 767 aa19.09■□□□□ 0.65
USB1-204ENST00000561568 TTBK2Q6IQ55 1244 aa19.09■□□□□ 0.65
USB1-204ENST00000561568 POTEEQ6S8J3 1075 aa19.09■□□□□ 0.65
USB1-204ENST00000561568 CCAR1Q8IX12 1150 aaKnown RBP19.09■□□□□ 0.65
USB1-204ENST00000561568 NUP133Q8WUM0 1156 aa19.09■□□□□ 0.65
USB1-204ENST00000561568 ALDH8A1Q9H2A2 487 aaPredicted RBP19.09■□□□□ 0.65
USB1-204ENST00000561568 TXNRD2Q9NNW7 524 aa19.09■□□□□ 0.65
USB1-204ENST00000561568 PDRG1Q9NUG6 133 aa19.09■□□□□ 0.65
USB1-204ENST00000561568 PALM3A6NDB9 673 aaPredicted RBP19.08■□□□□ 0.64
USB1-204ENST00000561568 KLRF2D3W0D1 207 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 GOLGA8HP0CJ92 632 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 SLC16A2P36021 539 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 GNAQP50148 359 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 LACTBP83111 547 aaPredicted RBP19.08■□□□□ 0.64
USB1-204ENST00000561568 GRM4Q14833 912 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 PPP2R5BQ15173 497 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 IL27Q8NEV9 243 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 CTCFLQ8NI51 663 aaPredicted RBP19.08■□□□□ 0.64
USB1-204ENST00000561568 UPF3BQ9BZI7 483 aaKnown RBP19.08■□□□□ 0.64
USB1-204ENST00000561568 SLC38A10Q9HBR0 1119 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 BTBD7Q9P203 1132 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 MAD2L2Q9UI95 211 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.64
USB1-204ENST00000561568 ATP2A1O14983 1001 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 CNMDO75829 334 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 GNRH1P01148 92 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 SMARCA1P28370 1054 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 OAZ1P54368 228 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 SYDE2Q5VT97 1194 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 FANCBQ8NB91 859 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 BRF1Q92994 677 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 LZTS2Q9BRK4 669 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 UBA5Q9GZZ9 404 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 PNMA2Q9UL42 364 aa19.07■□□□□ 0.64
USB1-204ENST00000561568 ZBTB43O43298 467 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 SLC25A27O95847 323 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 HOXD10P28358 340 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 MAPK4P31152 587 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 STAT3P40763 770 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 PSMC4P43686 418 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 RCAN1P53805 252 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 FCGRTP55899 365 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 EVCP57679 992 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 PLS1Q14651 629 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 TMEM132BQ14DG7 1078 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 ANKRD1Q15327 319 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 APOA5Q6Q788 366 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 RASGRP2Q7LDG7 609 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 SPATC1LQ9H0A9 340 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 BRPF3Q9ULD4 1205 aa19.06■□□□□ 0.64
USB1-204ENST00000561568 KLF18A0A0U1RQI7 1052 aa19.05■□□□□ 0.64
USB1-204ENST00000561568 FMNL1O95466 1100 aaPredicted RBP19.05■□□□□ 0.64
USB1-204ENST00000561568 COPB2P35606 906 aa19.05■□□□□ 0.64
USB1-204ENST00000561568 NEK4P51957 841 aa19.05■□□□□ 0.64
USB1-204ENST00000561568 STAG2Q8N3U4 1231 aa19.05■□□□□ 0.64
USB1-204ENST00000561568 SHCBP1Q8NEM2 672 aa19.05■□□□□ 0.64
USB1-204ENST00000561568 REPS2Q8NFH8 660 aa19.05■□□□□ 0.64
USB1-204ENST00000561568 CD99L2Q8TCZ2 262 aa19.05■□□□□ 0.64
USB1-204ENST00000561568 MROH8Q9H579 483 aa19.05■□□□□ 0.64
USB1-204ENST00000561568 PCNTO95613 3336 aa19.05■□□□□ 0.64
USB1-204ENST00000561568 CCDC196A0A1B0GTZ2 297 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 PEX10O60683 326 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 APOBRQ0VD83 1088 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 TOB2Q14106 344 aaPredicted RBP19.04■□□□□ 0.64
USB1-204ENST00000561568 RIOX2Q8IUF8 465 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 ADGRF4Q8IZF3 695 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 CPXCR1Q8N123 301 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 COA7Q96BR5 231 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 MYL10Q9BUA6 226 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 MOV10L1Q9BXT6 1211 aaKnown RBP19.04■□□□□ 0.64
USB1-204ENST00000561568 TEX13BQ9BXU2 312 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 RANBP17Q9H2T7 1088 aaKnown RBP19.04■□□□□ 0.64
USB1-204ENST00000561568 EFCC1Q9HA90 598 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 VAT1LQ9HCJ6 419 aa19.04■□□□□ 0.64
USB1-204ENST00000561568 RBM28Q9NW13 759 aaKnown RBP19.04■□□□□ 0.64
USB1-204ENST00000561568 ZNF214Q9UL59 606 aaPredicted RBP19.04■□□□□ 0.64
USB1-204ENST00000561568 NAP1L2Q9ULW6 460 aaPredicted RBP19.04■□□□□ 0.64
USB1-204ENST00000561568 STRNO43815 780 aa19.03■□□□□ 0.64
USB1-204ENST00000561568 DHX16O60231 1041 aaKnown RBP19.03■□□□□ 0.64
USB1-204ENST00000561568 ZNF274Q96GC6 653 aaPredicted RBP19.03■□□□□ 0.64
USB1-204ENST00000561568 TBC1D32Q96NH3 1257 aa19.03■□□□□ 0.64
USB1-204ENST00000561568 RIOX1Q9H6W3 641 aa19.03■□□□□ 0.64
USB1-204ENST00000561568 CWC22Q9HCG8 908 aaKnown RBP19.03■□□□□ 0.64
USB1-204ENST00000561568 RAVER2Q9HCJ3 691 aaKnown RBP19.03■□□□□ 0.64
USB1-204ENST00000561568 RLFQ13129 1914 aa19.03■□□□□ 0.64
USB1-204ENST00000561568 TNPO2O14787 897 aaKnown RBP19.02■□□□□ 0.64
USB1-204ENST00000561568 PRMT2P55345 433 aa19.02■□□□□ 0.64
USB1-204ENST00000561568 TRAF1Q13077 416 aa19.02■□□□□ 0.64
USB1-204ENST00000561568 SNRNP48Q6IEG0 339 aaKnown RBP19.02■□□□□ 0.64
USB1-204ENST00000561568 MICU3Q86XE3 530 aa19.02■□□□□ 0.64
USB1-204ENST00000561568 TRIM47Q96LD4 638 aa19.02■□□□□ 0.64
USB1-204ENST00000561568 KIF2CQ99661 725 aa19.02■□□□□ 0.64
USB1-204ENST00000561568 PORCNQ9H237 461 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms