RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	RC3H2	Q9HBD1	1191 aa	Known RBP	5.81	□□□□□ -1.48
LRRC28-222	ENST00000561431	SIRPG	Q9P1W8	387 aa		5.81	□□□□□ -1.48
LRRC28-222	ENST00000561431	ADAMTS6	Q9UKP5	1117 aa		5.81	□□□□□ -1.48
LRRC28-222	ENST00000561431	ABCC10	Q5T3U5	1492 aa		5.81	□□□□□ -1.48
LRRC28-222	ENST00000561431	UACA	Q9BZF9	1416 aa		5.81	□□□□□ -1.48
LRRC28-222	ENST00000561431	ABCA8	O94911	1581 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	KDM5B	Q9UGL1	1544 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	GOLGA3	Q08378	1498 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	RGS13	O14921	159 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	KLF4	O43474	513 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	FAM87A	P0C7U9	286 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	CYP7A1	P22680	504 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	CCNF	P41002	786 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	CASP7	P55210	303 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	NFE2L2	Q16236	605 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	BBS9	Q3SYG4	887 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	ZNF746	Q6NUN9	644 aa	Predicted RBP	5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	VHLL	Q6RSH7	139 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	SEZ6L2	Q6UXD5	910 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	CDH24	Q86UP0	819 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	TAB3	Q8N5C8	712 aa	Predicted RBP	5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	SLC6A18	Q96N87	628 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	PHAX	Q9H814	394 aa	Known RBP	5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	C1GALT1	Q9NS00	363 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	MBNL3	Q9NUK0	354 aa	Known RBP	5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	PCDHB10	Q9UN67	800 aa		5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	ZCCHC11	Q5TAX3	1644 aa	Known RBP	5.8	□□□□□ -1.48
LRRC28-222	ENST00000561431	PLB1	Q6P1J6	1458 aa		5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	TNFRSF10C	O14798	259 aa		5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	TP53	P04637	393 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	ACR	P10323	421 aa		5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	CD8B	P10966	210 aa		5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	SLC7A5	Q01650	507 aa		5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	ZYX	Q15942	572 aa	Known RBP	5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	CYP27C1	Q4G0S4	372 aa		5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	CCDC144CP	Q8IYA2	1237 aa		5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	MISP3	Q96FF7	219 aa		5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	MKRN2	Q9H000	416 aa	Known RBP	5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	CEP131	Q9UPN4	1083 aa		5.79	□□□□□ -1.48
LRRC28-222	ENST00000561431	NCAN	O14594	1321 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	PRRG2	O14669	202 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	RNF4	P78317	190 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	IFRD2	Q12894	506 aa	Predicted RBP	5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	NCAPH	Q15003	741 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	DDR2	Q16832	855 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	TDRD10	Q5VZ19	366 aa	Known RBP	5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	KIAA1211L	Q6NV74	962 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	LILRA6	Q6PI73	481 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	OGFOD3	Q6PK18	319 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	FAM178B	Q8IXR5	827 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	LRRN4CL	Q8ND94	238 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	RIN3	Q8TB24	985 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	PPP1R14A	Q96A00	147 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	FAM84A	Q96KN4	292 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	DUSP23	Q9BVJ7	150 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	KRTAP9-3	Q9BYQ3	159 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	CWC22	Q9HCG8	908 aa	Known RBP	5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	PRDM5	Q9NQX1	630 aa	Predicted RBP	5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	MAPK8IP1	Q9UQF2	711 aa		5.78	□□□□□ -1.48
LRRC28-222	ENST00000561431	GLI2	P10070	1586 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	ASXL2	Q76L83	1435 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	LEFTY1	O75610	366 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	UBOX5	O94941	541 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	SLITRK5	O94991	958 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	CBX7	O95931	251 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	ADAT2	Q7Z6V5	191 aa	Known RBP	5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	C1QL4	Q86Z23	238 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	PLD6	Q8N2A8	252 aa	Known RBP	5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	CELF2-AS1	Q8N7Q2	184 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	KREMEN1	Q96MU8	473 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	DEPDC7	Q96QD5	511 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	SUCO	Q9UBS9	1254 aa	Known RBP	5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	GTF2IRD1	Q9UHL9	959 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	FBXL21	Q9UKT6	434 aa		5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	PPRC1	Q5VV67	1664 aa	Known RBP	5.77	□□□□□ -1.49
LRRC28-222	ENST00000561431	LTBP3	Q9NS15	1303 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	EFCAB5	A4FU69	1503 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	GNAT3	A8MTJ3	354 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431		B2RBV5	119 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	GJB6	O95452	261 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	NAT2	P11245	290 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	CFP	P27918	469 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	CD96	P40200	585 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	PMS1	P54277	932 aa	Known RBP	5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	TCEAL1	Q15170	157 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	SFRP5	Q5T4F7	317 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	HEATR6	Q6AI08	1181 aa	Known RBP	5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	LCNL1	Q6ZST4	164 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	EEPD1	Q7L9B9	569 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	TMEM192	Q8IY95	271 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	FAM9A	Q8IZU1	332 aa	Predicted RBP	5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	LRP2BP	Q9P2M1	347 aa		5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	ZNF214	Q9UL59	606 aa	Predicted RBP	5.76	□□□□□ -1.49
LRRC28-222	ENST00000561431	MAP3K4	Q9Y6R4	1608 aa		5.76	□□□□□ -1.49

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