RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 PPFIA3O75145 1194 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 HLA-DOAP06340 250 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 TSPY3P0CV98 308 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 TSPY8P0CW00 308 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 CALM1P0DP23 149 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 CALM2P0DP24 149 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 CALM3P0DP25 149 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 IFNAR1P17181 557 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 GRK4P32298 578 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 GTF2A2P52657 109 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 TROAPQ12815 778 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 NFIAQ12857 509 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 RESTQ13127 1097 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 PPP2R5BQ15173 497 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 RCSD1Q6JBY9 416 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 ZNF444Q8N0Y2 327 aaPredicted RBP8.73□□□□□ -1.01
TPM1-231ENST00000561395 MTMR14Q8NCE2 650 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 ANKS1AQ92625 1134 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 RNF208Q9H0X6 261 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 EHD4Q9H223 541 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 IL17RBQ9NRM6 502 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 LMBRD1Q9NUN5 540 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 MTMR10Q9NXD2 777 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 FAM198AQ9UFP1 575 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 SWAP70Q9UH65 585 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 ATRNL1Q5VV63 1379 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 TRAK2O60296 914 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 FMNL1O95466 1100 aaPredicted RBP8.72□□□□□ -1.01
TPM1-231ENST00000561395 CTGFP29279 349 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 FOSBP53539 338 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 CACNB3P54284 484 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 SKOR2Q2VWA4 1001 aaPredicted RBP8.72□□□□□ -1.01
TPM1-231ENST00000561395 FOXD4L6Q3SYB3 417 aaPredicted RBP8.72□□□□□ -1.01
TPM1-231ENST00000561395 FOXD4L3Q6VB84 417 aaPredicted RBP8.72□□□□□ -1.01
TPM1-231ENST00000561395 FERMT3Q86UX7 667 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 DGKHQ86XP1 1220 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 ZFPM1Q8IX07 1006 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 FANCBQ8NB91 859 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 TMEM87AQ8NBN3 555 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 NEDD1Q8NHV4 660 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 RAET1EQ8TD07 263 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 U2AF1L4Q8WU68 220 aaKnown RBP8.72□□□□□ -1.01
TPM1-231ENST00000561395 NUP133Q8WUM0 1156 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 PHKBQ93100 1093 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 DHX36Q9H2U1 1008 aaKnown RBP8.72□□□□□ -1.01
TPM1-231ENST00000561395 ZSCAN16Q9H4T2 348 aaPredicted RBP8.72□□□□□ -1.01
TPM1-231ENST00000561395 RBM28Q9NW13 759 aaKnown RBP8.72□□□□□ -1.01
TPM1-231ENST00000561395 SRRDQ9UH36 339 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 PRUNE2Q8WUY3 3088 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 LAMA2P24043 3122 aaKnown RBP8.72□□□□□ -1.01
TPM1-231ENST00000561395 FRMPD3Q5JV73 1810 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 MYH4Q9Y623 1939 aa8.72□□□□□ -1.01
TPM1-231ENST00000561395 IGKV6D-41A0A0C4DH26 115 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 PRPF40AO75400 957 aaKnown RBP8.71□□□□□ -1.02
TPM1-231ENST00000561395 OSBPP22059 807 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 BMP8BP34820 402 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 SHMT1P34896 483 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 NOVP48745 357 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 UBXN2AP68543 259 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 SSRP1Q08945 709 aaKnown RBP8.71□□□□□ -1.02
TPM1-231ENST00000561395 FUT2Q10981 343 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 VGLL4Q14135 290 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 RASA3Q14644 834 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.71□□□□□ -1.02
TPM1-231ENST00000561395 TMTC3Q6ZXV5 915 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 SH3BP5LQ7L8J4 393 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 TRIM22Q8IYM9 498 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 FBXO18Q8NFZ0 1043 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 C8orf76Q96K31 380 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 PRMT6Q96LA8 375 aaPredicted RBP8.71□□□□□ -1.02
TPM1-231ENST00000561395 TRIM47Q96LD4 638 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 MAP3K14Q99558 947 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 GDF15Q99988 308 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 ALG1Q9BT22 464 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 SLC26A6Q9BXS9 759 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 TDRD3Q9H7E2 651 aaKnown RBP8.71□□□□□ -1.02
TPM1-231ENST00000561395 KAT14Q9H8E8 782 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 ZCCHC17Q9NP64 241 aaKnown RBP8.71□□□□□ -1.02
TPM1-231ENST00000561395 PRDM6Q9NQX0 595 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 BIN2Q9UBW5 565 aaPredicted RBP8.71□□□□□ -1.02
TPM1-231ENST00000561395 SERPINB13Q9UIV8 391 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 CNPY2Q9Y2B0 182 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 MYPNQ86TC9 1320 aa8.71□□□□□ -1.02
TPM1-231ENST00000561395 DDTLA6NHG4 134 aaPredicted RBP8.7□□□□□ -1.02
TPM1-231ENST00000561395 BTBD19C9JJ37 291 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 ENTPD3O75355 529 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 PLEKHA8P1O95397 391 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 PSMC4P43686 418 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 GUCY1B3Q02153 619 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 DNM1Q05193 864 aaKnown RBP8.7□□□□□ -1.02
TPM1-231ENST00000561395 TCP10Q12799 353 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 KLHL40Q2TBA0 621 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 LRIT3Q3SXY7 679 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 FKBP1CQ5VVH2 108 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 METTL16Q86W50 562 aaKnown RBP8.7□□□□□ -1.02
TPM1-231ENST00000561395 CDAN1Q8IWY9 1227 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 CRACR2BQ8N4Y2 399 aaPredicted RBP8.7□□□□□ -1.02
TPM1-231ENST00000561395 PNMA1Q8ND90 353 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 CTCFLQ8NI51 663 aaPredicted RBP8.7□□□□□ -1.02
TPM1-231ENST00000561395 WASF1Q92558 559 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms