RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	TAF6L	Q9Y6J9	622 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	TESPA1	A2RU30	521 aa	Predicted RBP	11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	FAM155A	B1AL88	458 aa	Predicted RBP	11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	PRSS12	P56730	875 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SEC23A	Q15436	765 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	TMEM67	Q5HYA8	995 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	OTUD7B	Q6GQQ9	843 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CYB5R4	Q7L1T6	521 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SGMS1	Q86VZ5	419 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SIAH1	Q8IUQ4	282 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ENAH	Q8N8S7	591 aa	Predicted RBP	11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	IGDCC4	Q8TDY8	1250 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CAPNS2	Q96L46	248 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	MAP3K14	Q99558	947 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	AGXT2	Q9BYV1	514 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	VCPKMT	Q9H867	229 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	KAT14	Q9H8E8	782 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CLIP2	Q9UDT6	1046 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SLC45A1	Q9Y2W3	748 aa		11.6	□□□□□ -0.55
KNSTRN-215	ENST00000561367	TRIM75P	A6NK02	468 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	WDR46	O15213	610 aa	Known RBP	11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ALDH1A1	P00352	501 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CALM1	P0DP23	149 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CALM2	P0DP24	149 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CALM3	P0DP25	149 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ANTXR2	P58335	489 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	FGD1	P98174	961 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	MTMR2	Q13614	643 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	PPP2R5B	Q15173	497 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	RABEP1	Q15276	862 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SYNE3	Q6ZMZ3	975 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	GMCL1	Q96IK5	515 aa		11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367	WDR33	Q9C0J8	1336 aa	Known RBP	11.59	□□□□□ -0.55
KNSTRN-215	ENST00000561367		A0A1W2PRG0	241 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CCDC69	A6NI79	296 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367		F5H6K3	240 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	SMAP	O00193	183 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	SH2B2	O14492	632 aa	Predicted RBP	11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PLA2G6	O60733	806 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	DDAH1	O94760	285 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	HOXA7	P31268	230 aa	Predicted RBP	11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	GJA5	P36382	358 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	TM4SF4	P48230	202 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ATP2B2	Q01814	1243 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	KLRC3	Q07444	240 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	GPATCH4	Q5T3I0	446 aa	Known RBP	11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CYP4F22	Q6NT55	531 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CATIP	Q7Z7H3	387 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ANKRD23	Q86SG2	305 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PNMA1	Q8ND90	353 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ANKK1	Q8NFD2	765 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ACER1	Q8TDN7	264 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	DCAF4	Q8WV16	495 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CHMP4C	Q96CF2	233 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	TMEM47	Q9BQJ4	181 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ZKSCAN3	Q9BRR0	538 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	LY9	Q9HBG7	655 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PNMA3	Q9UL41	463 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	AGTPBP1	Q9UPW5	1226 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	MYPN	Q86TC9	1320 aa		11.58	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CCL15-CCL14	A0A0B4J2E2	113 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	SOWAHB	A6NEL2	793 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	NMT2	O60551	498 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	SNHG28	P0DPA3	235 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	FDX1	P10109	184 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	MCM2	P49736	904 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	HMGCS2	P54868	508 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	EVC	P57679	992 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CCL15	Q16663	113 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PDRG1	Q9NUG6	133 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	SLC12A7	Q9Y666	1083 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PHIP	Q8WWQ0	1821 aa		11.57	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CCDC196	A0A1B0GTZ2	297 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	USP17L15	C9J2P7	530 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	USP17L13	C9JLJ4	530 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	USP17L11	C9JVI0	530 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	USP17L18	D6R9N7	530 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	USP17L22	D6RA61	530 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	USP17L17	D6RBQ6	530 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	USP17L19	D6RCP7	530 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	USP17L20	D6RJB6	530 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	NDUFB10	O96000	172 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	VCAM1	P19320	739 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	KIF5B	P33176	963 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	VEGFB	P49765	207 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	GNAQ	P50148	359 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	NEK4	P51957	841 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	KIF23	Q02241	960 aa	Predicted RBP	11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	USP17L24	Q0WX57	530 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ASPRV1	Q53RT3	343 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	SLFN13	Q68D06	897 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	NFXL1	Q6ZNB6	911 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367		Q6ZUG5	572 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	KIF2C	Q99661	725 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	THSD7B	Q9C0I4	1608 aa		11.56	□□□□□ -0.56
KNSTRN-215	ENST00000561367	LOC285556	D6RIA3	1793 aa		11.55	□□□□□ -0.56

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