RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ECHDC1Q9NTX5 307 aa14.17□□□□□ -0.14
CARMIL3-204ENST00000561354 SYNGAP1Q96PV0 1343 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 TMEM265A0A087WTH1 108 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 MOXD2PA6NHM9 499 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 GSG1L2A8MUP6 293 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 SNAI1O95863 264 aaPredicted RBP14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 RAG1P15918 1043 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 SNRNP48Q6IEG0 339 aaKnown RBP14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 ZNF467Q7Z7K2 595 aaPredicted RBP14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 KLHDC9Q8NEP7 349 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 DDX11Q96FC9 970 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 NUP88Q99567 741 aaPredicted RBP14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 TTYH1Q9H313 450 aaPredicted RBP14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 MKNK2Q9HBH9 465 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 FAM184BQ9ULE4 1060 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 SYNPO2Q9UMS6 1093 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 RIPK3Q9Y572 518 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 DNAH12Q6ZR08 3092 aa14.16□□□□□ -0.14
CARMIL3-204ENST00000561354 PQBP1O60828 265 aaKnown RBP14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 NDUFB10O96000 172 aa14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 ACLYP53396 1101 aa14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 EPHB4P54760 987 aa14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 CCSAPQ6IQ19 270 aaPredicted RBP14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 KBTBD3Q8NAB2 608 aa14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 NUP133Q8WUM0 1156 aa14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 APPBP2Q92624 585 aa14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 MKL1Q969V6 931 aa14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 RNPC3Q96LT9 517 aaKnown RBP14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 STARD7Q9NQZ5 370 aa14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 TMEM39AQ9NV64 488 aa14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 CUL9Q8IWT3 2517 aa14.15□□□□□ -0.14
CARMIL3-204ENST00000561354 SYNRGQ9UMZ2 1314 aa14.15□□□□□ -0.15
CARMIL3-204ENST00000561354 IGKV6D-41A0A0C4DH26 115 aa14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 DCDC2CA8MYV0 355 aa14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 MINDY4BA8MYZ0 360 aa14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 SMARCA5O60264 1052 aaPredicted RBP14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 ZBED4O75132 1171 aa14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 DUSP11O75319 330 aaKnown RBP14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 FPGSQ05932 587 aa14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 FAAP100Q0VG06 881 aa14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 MAFAQ8NHW3 353 aaPredicted RBP14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 OSBP2Q969R2 916 aa14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 LENG1Q96BZ8 264 aaPredicted RBP14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 ZNF287Q9HBT7 754 aa14.14□□□□□ -0.15
CARMIL3-204ENST00000561354 A0A0C4DFX4 3053 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 RNF113AO15541 343 aaKnown RBP14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 ZFYP08048 801 aaPredicted RBP14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 GNAT2P19087 354 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 CST5P28325 142 aaPredicted RBP14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 OAZ1P54368 228 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 KCNA10Q16322 511 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 ZNF444Q8N0Y2 327 aaPredicted RBP14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 CPXCR1Q8N123 301 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 MYLIPQ8WY64 445 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 ABHD16BQ9H3Z7 469 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 SLC38A10Q9HBR0 1119 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 CLIP2Q9UDT6 1046 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 FBXO40Q9UH90 709 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 FEM1BQ9UK73 627 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 RCAN3Q9UKA8 241 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 ZHX1Q9UKY1 873 aaPredicted RBP14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 ELP1O95163 1332 aa14.13□□□□□ -0.15
CARMIL3-204ENST00000561354 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 GPAA1O43292 621 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 TIMP1P01033 207 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 ACVR2BQ13705 512 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 STK11IPQ8N1F8 1099 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 PCSK9Q8NBP7 692 aaKnown RBP14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 GMCL1P1Q8NEA9 526 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 CHST13Q8NET6 341 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 GPATCH3Q96I76 525 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 GLT1D1Q96MS3 346 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 RAVER2Q9HCJ3 691 aaKnown RBP14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 EPB41L4AQ9HCS5 686 aaPredicted RBP14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 MTMR4Q9NYA4 1195 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 TBX21Q9UL17 535 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 CTDP1Q9Y5B0 961 aaPredicted RBP14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 MROH7Q68CQ1 1323 aa14.12□□□□□ -0.15
CARMIL3-204ENST00000561354 MYADML2A6NDP7 307 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 TTLL1O95922 423 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 FDX1P10109 184 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 FOSL2P15408 326 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 TDO2P48775 406 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 CDK7P50613 346 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 ANKRD35Q8N283 1001 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 KIFC2Q96AC6 838 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 CEP95Q96GE4 821 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 FGD4Q96M96 766 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 YTHDC1Q96MU7 727 aaKnown RBP14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 UPF3AQ9H1J1 476 aaKnown RBP14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 DCTPP1Q9H773 170 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 SPC25Q9HBM1 224 aa14.11□□□□□ -0.15
CARMIL3-204ENST00000561354 PATL2C9JE40 543 aaKnown RBP14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 PRDM1O75626 825 aa14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 ASGR1P07306 291 aa14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 C6orf222P0C671 652 aaPredicted RBP14.1□□□□□ -0.15
CARMIL3-204ENST00000561354 SLC4A3P48751 1232 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms