RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TRIM21P19474 475 aaKnown RBP18.44■□□□□ 0.54
TPM1-228ENST00000560975 PHKA1P46020 1223 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 CREG2Q8IUH2 290 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 DCAF5Q96JK2 942 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 LRWD1Q9UFC0 647 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 CAPN11Q9UMQ6 739 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 FNTAP49354 379 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 CCDC96Q2M329 555 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 LDHAL6AQ6ZMR3 332 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 B4GALNT4Q76KP1 1039 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 ANKLE2Q86XL3 938 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 FERMT2Q96AC1 680 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 SUFUQ9UMX1 484 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 CEP83Q9Y592 693 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 TMEM94Q12767 1356 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 LGALS16A8MUM7 142 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 PATL2C9JE40 543 aaKnown RBP18.43■□□□□ 0.54
TPM1-228ENST00000560975 RPN1P04843 607 aaKnown RBP18.43■□□□□ 0.54
TPM1-228ENST00000560975 GUCY1A3Q02108 690 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 APBA1Q02410 837 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 ZNF658Q5TYW1 1059 aaPredicted RBP18.43■□□□□ 0.54
TPM1-228ENST00000560975 KRT23Q9C075 422 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 CENPHQ9H3R5 247 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 MLXIPQ9HAP2 919 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 ZNHIT6Q9NWK9 470 aaKnown RBP18.43■□□□□ 0.54
TPM1-228ENST00000560975 CCDC196A0A1B0GTZ2 297 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 KIF5AQ12840 1032 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 TTC38Q5R3I4 469 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 THEMISQ8N1K5 641 aaPredicted RBP18.43■□□□□ 0.54
TPM1-228ENST00000560975 MAGEB6Q8N7X4 407 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 SPATA4Q8NEY3 305 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 ZIM3Q96PE6 472 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 CNNM1Q9NRU3 951 aa18.43■□□□□ 0.54
TPM1-228ENST00000560975 MEFVO15553 781 aaPredicted RBP18.42■□□□□ 0.54
TPM1-228ENST00000560975 GTPBP6O43824 516 aaPredicted RBP18.42■□□□□ 0.54
TPM1-228ENST00000560975 NNTQ13423 1086 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 NFRKBQ6P4R8 1299 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 CNNM2Q9H8M5 875 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 SNX12Q9UMY4 172 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 CAPN6Q9Y6Q1 641 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 V9GY48 417 aaPredicted RBP18.42■□□□□ 0.54
TPM1-228ENST00000560975 MYH7P12883 1935 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 ARHGAP23Q9P227 1491 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 PDXDC2PQ6P474 469 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 MMGT1Q8N4V1 131 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 BANK1Q8NDB2 785 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 TRIM47Q96LD4 638 aa18.42■□□□□ 0.54
TPM1-228ENST00000560975 ANO9A1A5B4 782 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 PLEKP08567 350 aaPredicted RBP18.41■□□□□ 0.54
TPM1-228ENST00000560975 XBP1P17861 261 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 ATP2B2Q01814 1243 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 FAM212AQ96EL1 285 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 RNPC3Q96LT9 517 aaKnown RBP18.41■□□□□ 0.54
TPM1-228ENST00000560975 SCN11AQ9UI33 1791 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 TCRBV5S4A2TA0A5A2 114 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 H7C1D1 291 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 MOCS3O95396 460 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 MCM7P33993 719 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 SKOR1P84550 965 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 CCDC181Q5TID7 509 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 LAMB4A4D0S4 1761 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 MEGF6O75095 1541 aa18.41■□□□□ 0.54
TPM1-228ENST00000560975 ADAMTS7Q9UKP4 1686 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 MYCNP04198 464 aaPredicted RBP18.4■□□□□ 0.54
TPM1-228ENST00000560975 SEC24CP53992 1094 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 EPHB4P54760 987 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 HELBQ8NG08 1087 aaPredicted RBP18.4■□□□□ 0.54
TPM1-228ENST00000560975 ZNF507Q8TCN5 953 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 UBAC1Q9BSL1 405 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 DONSONQ9NYP3 566 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 MAGEC2Q9UBF1 373 aaPredicted RBP18.4■□□□□ 0.54
TPM1-228ENST00000560975 NCK2O43639 380 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 GPTP24298 496 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 PKN1Q16512 942 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 GIMAP7Q8NHV1 300 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 PLIN2Q99541 437 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 BCL9LQ86UU0 1499 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 GSG1L2A8MUP6 293 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 ZNF263O14978 683 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 LSP1P33241 339 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 NAA35Q5VZE5 725 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 CCDC43Q96MW1 224 aaKnown RBP18.4■□□□□ 0.54
TPM1-228ENST00000560975 PHF20Q9BVI0 1012 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 STIM2Q9P246 746 aa18.4■□□□□ 0.54
TPM1-228ENST00000560975 ESYT3A0FGR9 886 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 SMIM22K7EJ46 135 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 RDXP35241 583 aaKnown RBP18.39■□□□□ 0.53
TPM1-228ENST00000560975 DNA2P51530 1060 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 IL17AQ16552 155 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 HAUS3Q68CZ6 603 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 BAZ2BQ9UIF8 2168 aaKnown RBP18.39■□□□□ 0.53
TPM1-228ENST00000560975 RGPD5Q99666 1765 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 A0A1W2PQC6 194 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 FSBPO95073 299 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 NAP1L1P55209 391 aaKnown RBP18.39■□□□□ 0.53
TPM1-228ENST00000560975 TBC1D8BQ0IIM8 1120 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 SPA17Q15506 151 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 MEA1Q16626 185 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 ALS2CLQ60I27 953 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms