RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 SGPP1Q9BX95 441 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 GPR62Q9BZJ7 368 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 DUSP13Q9UII6 198 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 INPP5FQ9Y2H2 1132 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 ADAMTS20P59510 1910 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 TNFRSF10CO14798 259 aa7.26□□□□□ -1.25
PSMA4-221ENST00000560842 RGS13O14921 159 aa7.26□□□□□ -1.25
PSMA4-221ENST00000560842 SNX17Q15036 470 aa7.26□□□□□ -1.25
PSMA4-221ENST00000560842 INTS3Q68E01 1043 aaKnown RBP7.26□□□□□ -1.25
PSMA4-221ENST00000560842 OVOS1Q6IE37 1185 aa7.26□□□□□ -1.25
PSMA4-221ENST00000560842 GGNQ86UU5 652 aa7.26□□□□□ -1.25
PSMA4-221ENST00000560842 TAB3Q8N5C8 712 aaPredicted RBP7.26□□□□□ -1.25
PSMA4-221ENST00000560842 SLC43A3Q8NBI5 491 aa7.26□□□□□ -1.25
PSMA4-221ENST00000560842 EFR3BQ9Y2G0 817 aa7.26□□□□□ -1.25
PSMA4-221ENST00000560842 ATF4P18848 351 aaPredicted RBP7.25□□□□□ -1.25
PSMA4-221ENST00000560842 PDE6BP35913 854 aa7.25□□□□□ -1.25
PSMA4-221ENST00000560842 CCNFP41002 786 aa7.25□□□□□ -1.25
PSMA4-221ENST00000560842 NFKB2Q00653 900 aa7.25□□□□□ -1.25
PSMA4-221ENST00000560842 SSPNQ14714 243 aa7.25□□□□□ -1.25
PSMA4-221ENST00000560842 PRRT2Q7Z6L0 340 aaPredicted RBP7.25□□□□□ -1.25
PSMA4-221ENST00000560842 TSPYL5Q86VY4 417 aaPredicted RBP7.25□□□□□ -1.25
PSMA4-221ENST00000560842 SPPL2CQ8IUH8 684 aa7.25□□□□□ -1.25
PSMA4-221ENST00000560842 VWCEQ96DN2 955 aa7.25□□□□□ -1.25
PSMA4-221ENST00000560842 CCDC74BQ96LY2 380 aa7.25□□□□□ -1.25
PSMA4-221ENST00000560842 GPATCH2Q9NW75 528 aa7.25□□□□□ -1.25
PSMA4-221ENST00000560842 KLHL3Q9UH77 587 aa7.25□□□□□ -1.25
PSMA4-221ENST00000560842 SASH1O94885 1247 aa7.24□□□□□ -1.25
PSMA4-221ENST00000560842 NME1P15531 152 aaKnown RBP7.24□□□□□ -1.25
PSMA4-221ENST00000560842 ARSHQ5FYA8 562 aa7.24□□□□□ -1.25
PSMA4-221ENST00000560842 NLRC3Q7RTR2 1065 aa7.24□□□□□ -1.25
PSMA4-221ENST00000560842 GMLQ99445 158 aa7.24□□□□□ -1.25
PSMA4-221ENST00000560842 ANTXR1Q9H6X2 564 aa7.24□□□□□ -1.25
PSMA4-221ENST00000560842 PPT2Q9UMR5 302 aa7.24□□□□□ -1.25
PSMA4-221ENST00000560842 OTOL1A6NHN0 477 aaPredicted RBP7.23□□□□□ -1.25
PSMA4-221ENST00000560842 UBOX5O94941 541 aa7.23□□□□□ -1.25
PSMA4-221ENST00000560842 GIPRP48546 466 aa7.23□□□□□ -1.25
PSMA4-221ENST00000560842 SHISA4Q96DD7 197 aa7.23□□□□□ -1.25
PSMA4-221ENST00000560842 TM9SF2Q99805 663 aa7.23□□□□□ -1.25
PSMA4-221ENST00000560842 STRIP2Q9ULQ0 834 aa7.23□□□□□ -1.25
PSMA4-221ENST00000560842 CELA3BP08861 270 aa7.22□□□□□ -1.25
PSMA4-221ENST00000560842 NASPP49321 788 aaPredicted RBP7.22□□□□□ -1.25
PSMA4-221ENST00000560842 CHRNEQ04844 493 aa7.22□□□□□ -1.25
PSMA4-221ENST00000560842 PANK1Q8TE04 598 aa7.22□□□□□ -1.25
PSMA4-221ENST00000560842 SHDQ96IW2 340 aa7.22□□□□□ -1.25
PSMA4-221ENST00000560842 C8orf37Q96NL8 207 aa7.22□□□□□ -1.25
PSMA4-221ENST00000560842 FERD3LQ96RJ6 166 aa7.22□□□□□ -1.25
PSMA4-221ENST00000560842 KIF2CQ99661 725 aa7.22□□□□□ -1.25
PSMA4-221ENST00000560842 PCDHA11Q9Y5I1 949 aa7.22□□□□□ -1.25
PSMA4-221ENST00000560842 ACRP10323 421 aa7.21□□□□□ -1.26
PSMA4-221ENST00000560842 RAG1P15918 1043 aa7.21□□□□□ -1.26
PSMA4-221ENST00000560842 ZC3H6P61129 1189 aaKnown RBP7.21□□□□□ -1.26
PSMA4-221ENST00000560842 GNL2Q13823 731 aaKnown RBP7.21□□□□□ -1.26
PSMA4-221ENST00000560842 LSRQ86X29 649 aaPredicted RBP7.21□□□□□ -1.26
PSMA4-221ENST00000560842 DTWD2Q8NBA8 298 aa7.21□□□□□ -1.26
PSMA4-221ENST00000560842 OR6P1Q8NGX9 317 aa7.21□□□□□ -1.26
PSMA4-221ENST00000560842 RNF141Q8WVD5 230 aa7.21□□□□□ -1.26
PSMA4-221ENST00000560842 DACT3Q96B18 629 aaPredicted RBP7.21□□□□□ -1.26
PSMA4-221ENST00000560842 SYTL4Q96C24 671 aaPredicted RBP7.21□□□□□ -1.26
PSMA4-221ENST00000560842 SIGLEC10Q96LC7 697 aa7.21□□□□□ -1.26
PSMA4-221ENST00000560842 SRRTQ9BXP5 876 aaKnown RBP7.21□□□□□ -1.26
PSMA4-221ENST00000560842 CAPN10Q9HC96 672 aa7.21□□□□□ -1.26
PSMA4-221ENST00000560842 GPR160Q9UJ42 338 aa7.21□□□□□ -1.26
PSMA4-221ENST00000560842 ADRB1P08588 477 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 PI3P19957 117 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 LTKP29376 864 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 VPS37DQ86XT2 251 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 PHACTR4Q8IZ21 702 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 ANKS4BQ8N8V4 417 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 BORCS6Q96GS4 357 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 KREMEN1Q96MU8 473 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 SLC9A7Q96T83 725 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 ASPNQ9BXN1 380 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.2□□□□□ -1.26
PSMA4-221ENST00000560842 EBF1Q9UH73 591 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 KCNH3Q9ULD8 1083 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 IRAK3Q9Y616 596 aa7.2□□□□□ -1.26
PSMA4-221ENST00000560842 PSPNO60542 156 aa7.19□□□□□ -1.26
PSMA4-221ENST00000560842 FGRP09769 529 aa7.19□□□□□ -1.26
PSMA4-221ENST00000560842 EIF6P56537 245 aaKnown RBP7.19□□□□□ -1.26
PSMA4-221ENST00000560842 ERICH6BQ5W0A0 696 aa7.19□□□□□ -1.26
PSMA4-221ENST00000560842 NPM2Q86SE8 214 aaKnown RBP7.19□□□□□ -1.26
PSMA4-221ENST00000560842 C19orf47Q8N9M1 422 aaKnown RBP7.19□□□□□ -1.26
PSMA4-221ENST00000560842 MBD1Q9UIS9 605 aaPredicted RBP7.19□□□□□ -1.26
PSMA4-221ENST00000560842 OR14I1A6ND48 311 aa7.18□□□□□ -1.26
PSMA4-221ENST00000560842 HRKO00198 91 aa7.18□□□□□ -1.26
PSMA4-221ENST00000560842 GUCY2CP25092 1073 aa7.18□□□□□ -1.26
PSMA4-221ENST00000560842 POLR2BP30876 1174 aaKnown RBP7.18□□□□□ -1.26
PSMA4-221ENST00000560842 GBP1P32455 592 aa7.18□□□□□ -1.26
PSMA4-221ENST00000560842 AFF3P51826 1226 aaKnown RBP7.18□□□□□ -1.26
PSMA4-221ENST00000560842 SRSF3P84103 164 aaKnown RBP7.18□□□□□ -1.26
PSMA4-221ENST00000560842 DUSP4Q13115 394 aa7.18□□□□□ -1.26
PSMA4-221ENST00000560842 CCDC81Q6ZN84 652 aa7.18□□□□□ -1.26
PSMA4-221ENST00000560842 CASP7P55210 303 aa7.17□□□□□ -1.26
PSMA4-221ENST00000560842 ARID5AQ03989 594 aa7.17□□□□□ -1.26
PSMA4-221ENST00000560842 NBPF12Q5TAG4 269 aaPredicted RBP7.17□□□□□ -1.26
PSMA4-221ENST00000560842 TMEM192Q8IY95 271 aa7.17□□□□□ -1.26
PSMA4-221ENST00000560842 FEZF2Q8TBJ5 459 aa7.17□□□□□ -1.26
PSMA4-221ENST00000560842 LINC01599Q8WXQ3 324 aa7.17□□□□□ -1.26
PSMA4-221ENST00000560842 ZNF281Q9Y2X9 895 aa7.17□□□□□ -1.26
PSMA4-221ENST00000560842 NOTOA8MTQ0 251 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms