RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 TNFAIP1Q13829 316 aa8.58□□□□□ -1.04
IDH3A-220ENST00000560667 SF3A1Q15459 793 aaKnown RBP8.58□□□□□ -1.04
IDH3A-220ENST00000560667 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.58□□□□□ -1.04
IDH3A-220ENST00000560667 KRT26Q7Z3Y9 468 aa8.58□□□□□ -1.04
IDH3A-220ENST00000560667 TNFRSF25Q93038 417 aa8.58□□□□□ -1.04
IDH3A-220ENST00000560667 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
IDH3A-220ENST00000560667 ZHX2Q9Y6X8 837 aa8.58□□□□□ -1.04
IDH3A-220ENST00000560667 COL2A1P02458 1487 aaPredicted RBP8.58□□□□□ -1.04
IDH3A-220ENST00000560667 MYH6P13533 1939 aa8.58□□□□□ -1.04
IDH3A-220ENST00000560667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.57□□□□□ -1.04
IDH3A-220ENST00000560667 TRIM75PA6NK02 468 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 KRT85P78386 507 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 TRIM29Q14134 588 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 SPECC1Q5M775 1068 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 CAVIN1Q6NZI2 390 aaKnown RBP8.57□□□□□ -1.04
IDH3A-220ENST00000560667 NOSTRINQ8IVI9 506 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 DCPSQ96C86 337 aaKnown RBP8.57□□□□□ -1.04
IDH3A-220ENST00000560667 WNK4Q96J92 1243 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 L3MBTL3Q96JM7 780 aaPredicted RBP8.57□□□□□ -1.04
IDH3A-220ENST00000560667 CLIC6Q96NY7 704 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 UIMC1Q96RL1 719 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 SPZ1Q9BXG8 430 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 EMILIN3Q9NT22 766 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 BARHL2Q9NY43 387 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 BIN2Q9UBW5 565 aaPredicted RBP8.57□□□□□ -1.04
IDH3A-220ENST00000560667 ZNF112Q9UJU3 913 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 RCOR1Q9UKL0 485 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 SMCO2A6NFE2 343 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 M0R2N6 131 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 CTNND1O60716 968 aaKnown RBP8.57□□□□□ -1.04
IDH3A-220ENST00000560667 BMP3P12645 472 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 PTPRAP18433 802 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 MTMR2Q13614 643 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 PTPAQ15257 358 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 QRICH1Q2TAL8 776 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 PIK3AP1Q6ZUJ8 805 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 GAS2L3Q86XJ1 694 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 APOBEC3FQ8IUX4 373 aaKnown RBP8.57□□□□□ -1.04
IDH3A-220ENST00000560667 LINC00301Q8NCQ3 95 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 PRR12Q9ULL5 1215 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 PCDHA7Q9UN72 937 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 PCDHA6Q9UN73 950 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 CLEC11AQ9Y240 323 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 KIF3AQ9Y496 699 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 PCDHA8Q9Y5H6 950 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 BRCA2P51587 3418 aa8.57□□□□□ -1.04
IDH3A-220ENST00000560667 DDX11L8A8MPP1 907 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP17L15C9J2P7 530 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP17L13C9JLJ4 530 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP17L11C9JVI0 530 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP17L18D6R9N7 530 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP17L22D6RA61 530 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP17L17D6RBQ6 530 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP17L19D6RCP7 530 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP17L20D6RJB6 530 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 ASNSP08243 561 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 GNAQP50148 359 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 MMP14P50281 582 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP17L24Q0WX57 530 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 GNL2Q13823 731 aaKnown RBP8.56□□□□□ -1.04
IDH3A-220ENST00000560667 ZNF174Q15697 407 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 UBE2SQ16763 222 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USH1GQ495M9 461 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 ASPRV1Q53RT3 343 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 JAKMIP3Q5VZ66 844 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP17L6PQ6QN14 398 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 GMCL1P1Q8NEA9 526 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 WASF1Q92558 559 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 KIFC2Q96AC6 838 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 RRP36Q96EU6 259 aaKnown RBP8.56□□□□□ -1.04
IDH3A-220ENST00000560667 GOLPH3LQ9H4A5 285 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 ZC3H4Q9UPT8 1303 aaKnown RBP8.56□□□□□ -1.04
IDH3A-220ENST00000560667 NT5C2P49902 561 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 NAPAP54920 295 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 IKQ13123 557 aaPredicted RBP8.56□□□□□ -1.04
IDH3A-220ENST00000560667 VGLL4Q14135 290 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 ANO1Q5XXA6 986 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 CCDC174Q6PII3 467 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 POTEEQ6S8J3 1075 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 USP49Q70CQ1 688 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 SULF1Q8IWU6 871 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 TMEM87AQ8NBN3 555 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 SMC1BQ8NDV3 1235 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.56□□□□□ -1.04
IDH3A-220ENST00000560667 ERCC4Q92889 916 aaPredicted RBP8.56□□□□□ -1.04
IDH3A-220ENST00000560667 MTMR8Q96EF0 704 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 CDCA5Q96FF9 252 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 GMCL1Q96IK5 515 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 ZFP91Q96JP5 570 aaPredicted RBP8.56□□□□□ -1.04
IDH3A-220ENST00000560667 FOXP1Q9H334 677 aaPredicted RBP8.56□□□□□ -1.04
IDH3A-220ENST00000560667 VCPKMTQ9H867 229 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 RTEL1Q9NZ71 1219 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 ATP6V1DQ9Y5K8 247 aa8.56□□□□□ -1.04
IDH3A-220ENST00000560667 A0A087WWV3 80 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 PNMA6FA0A0J9YX94 578 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 A0A1B0GVL5 298 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 OPLAHO14841 1288 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 ZBTB5O15062 677 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 NR1I2O75469 434 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 KRT2P35908 639 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms