RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 THAP9Q9H5L6 903 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 CD248Q9HCU0 757 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 RMND1Q9NWS8 449 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 RNF14Q9UBS8 474 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 HMGB1P1B2RPK0 211 aaPredicted RBP17.93■□□□□ 0.46
PBX1-219ENST00000560641 GTPBP6O43824 516 aaPredicted RBP17.93■□□□□ 0.46
PBX1-219ENST00000560641 CAGE1Q8TC20 777 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 SLC40A1Q9NP59 571 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 ZMYND10O75800 440 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 ADD2P35612 726 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 KLHL10Q6JEL2 608 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 PDXDC2PQ6P474 469 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 LRRC1Q9BTT6 524 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 SENP2Q9HC62 589 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 DMGDHQ9UI17 866 aaKnown RBP17.93■□□□□ 0.46
PBX1-219ENST00000560641 ODF2LQ9ULJ1 636 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 C5orf60A6NFR6 353 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 CALRP27797 417 aaKnown RBP17.93■□□□□ 0.46
PBX1-219ENST00000560641 MDH1P40925 334 aaKnown RBP17.93■□□□□ 0.46
PBX1-219ENST00000560641 SLC8A3P57103 927 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 CTDSPL2Q05D32 466 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 UBE3CQ15386 1083 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 NLRP14Q86W24 1093 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 MICU3Q86XE3 530 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 FMNL3Q8IVF7 1028 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 TRIM22Q8IYM9 498 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 RUFY1Q96T51 708 aa17.93■□□□□ 0.46
PBX1-219ENST00000560641 SETD1BQ9UPS6 1966 aaKnown RBP17.92■□□□□ 0.46
PBX1-219ENST00000560641 SNRPA1P09661 255 aaKnown RBP17.92■□□□□ 0.46
PBX1-219ENST00000560641 SRGNP10124 158 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 MYL6BP14649 208 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 IDEP14735 1019 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 NOC3LQ8WTT2 800 aaKnown RBP17.92■□□□□ 0.46
PBX1-219ENST00000560641 AIDAQ96BJ3 306 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 CAPZA3Q96KX2 299 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 RNPC3Q96LT9 517 aaKnown RBP17.92■□□□□ 0.46
PBX1-219ENST00000560641 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.92■□□□□ 0.46
PBX1-219ENST00000560641 VPS16Q9H269 839 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 ZNHIT6Q9NWK9 470 aaKnown RBP17.92■□□□□ 0.46
PBX1-219ENST00000560641 TAB2Q9NYJ8 693 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 RCCD1A6NED2 376 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 UBXN1Q04323 297 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 PPP2R5BQ15173 497 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 CEP85LQ5SZL2 805 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 MAB21L3Q8N8X9 362 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 SYMPKQ92797 1274 aaKnown RBP17.92■□□□□ 0.46
PBX1-219ENST00000560641 GDAP1L1Q96MZ0 367 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 CCT8L2Q96SF2 557 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 LACRTQ9GZZ8 138 aa17.92■□□□□ 0.46
PBX1-219ENST00000560641 GOLGA6L7A0A1B0GV03 622 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 TRIM75PA6NK02 468 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 ZNF185O15231 689 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 SNCBQ16143 134 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 ARMC9Q7Z3E5 817 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 CRACR2BQ8N4Y2 399 aaPredicted RBP17.91■□□□□ 0.46
PBX1-219ENST00000560641 PIK3R5Q8WYR1 880 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 N4BP2L2Q92802 583 aaPredicted RBP17.91■□□□□ 0.46
PBX1-219ENST00000560641 GUCY1A2P33402 732 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 DNM2P50570 870 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 IRX1P78414 480 aaPredicted RBP17.91■□□□□ 0.46
PBX1-219ENST00000560641 ZBED6P86452 979 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 XRCC4Q13426 336 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 KIAA1328Q86T90 577 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 SGSM3Q96HU1 749 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 SLC12A7Q9Y666 1083 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 ZNF233A6NK53 670 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 PAEPP09466 180 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 SLC8A1P32418 973 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 ITGB3BPQ13352 177 aaPredicted RBP17.91■□□□□ 0.46
PBX1-219ENST00000560641 TSR1Q2NL82 804 aaKnown RBP17.91■□□□□ 0.46
PBX1-219ENST00000560641 LRRC24Q50LG9 513 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 LRIG3Q6UXM1 1119 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 PARP9Q8IXQ6 854 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 HDAC7Q8WUI4 952 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 NELFBQ8WX92 580 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 LRRC59Q96AG4 307 aaKnown RBP17.91■□□□□ 0.46
PBX1-219ENST00000560641 CNNM2Q9H8M5 875 aa17.91■□□□□ 0.46
PBX1-219ENST00000560641 C1orf167Q5SNV9 1468 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 PAPPAQ13219 1627 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 PARP1P09874 1014 aaKnown RBP17.9■□□□□ 0.46
PBX1-219ENST00000560641 NR1D1P20393 614 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 SH2D4AQ9H788 454 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 NHEJ1Q9H9Q4 299 aaPredicted RBP17.9■□□□□ 0.46
PBX1-219ENST00000560641 GHRP10912 638 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 SCP2P22307 547 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 TMEM67Q5HYA8 995 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 FUKQ8N0W3 1084 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 EPSTI1Q96J88 318 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 ATP6V1G3Q96LB4 118 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 RBM28Q9NW13 759 aaKnown RBP17.9■□□□□ 0.46
PBX1-219ENST00000560641 DENND2AQ9ULE3 1009 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 HYOU1Q9Y4L1 999 aa17.9■□□□□ 0.46
PBX1-219ENST00000560641 TRPM3Q9HCF6 1732 aaPredicted RBP17.9■□□□□ 0.46
PBX1-219ENST00000560641 PLCH1Q4KWH8 1693 aa17.89■□□□□ 0.46
PBX1-219ENST00000560641 CYB5D1Q6P9G0 228 aa17.89■□□□□ 0.46
PBX1-219ENST00000560641 FAM228AQ86W67 206 aa17.89■□□□□ 0.46
PBX1-219ENST00000560641 SMYD4Q8IYR2 804 aaPredicted RBP17.89■□□□□ 0.46
PBX1-219ENST00000560641 DDX20Q9UHI6 824 aaKnown RBP17.89■□□□□ 0.46
PBX1-219ENST00000560641 TSKSQ9UJT2 592 aa17.89■□□□□ 0.46
PBX1-219ENST00000560641 PJA2O43164 708 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms