RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 IQUBQ8NA54 791 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 SNED1Q8TER0 1413 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 SHISA4Q96DD7 197 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 QTRT2Q9H974 415 aaKnown RBP11.05□□□□□ -0.64
RTF1-206ENST00000560447 MAGEF1Q9HAY2 307 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 IL17RBQ9NRM6 502 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 IFNKQ9P0W0 207 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 SERTAD1Q9UHV2 236 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 NRBP1Q9UHY1 535 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 MAN1B1Q9UKM7 699 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 ATP6V0A2Q9Y487 856 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 ESYT2A0FGR8 921 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 M0R2N6 131 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 BIN1O00499 593 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 PPEF1O14829 653 aaPredicted RBP11.04□□□□□ -0.64
RTF1-206ENST00000560447 TOP1P11387 765 aaKnown RBP11.04□□□□□ -0.64
RTF1-206ENST00000560447 SKILP12757 684 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 NPR1P16066 1061 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 SFPQP23246 707 aaKnown RBP eCLIP11.04□□□□□ -0.64
RTF1-206ENST00000560447 PLCD1P51178 756 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 RHBDL3P58872 404 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 FKBP1AP62942 108 aaKnown RBP11.04□□□□□ -0.64
RTF1-206ENST00000560447 CCZ1BP86790 482 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 CCZ1P86791 482 aaPredicted RBP11.04□□□□□ -0.64
RTF1-206ENST00000560447 FOXP4Q8IVH2 680 aaPredicted RBP11.04□□□□□ -0.64
RTF1-206ENST00000560447 CCDC24Q8N4L8 307 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 TGFBRAP1Q8WUH2 860 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 MRIQ9BWK5 157 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 RMND1Q9NWS8 449 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 BARHL2Q9NY43 387 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 SWAP70Q9UH65 585 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 MAD2L2Q9UI95 211 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 FLT1P17948 1338 aa11.04□□□□□ -0.64
RTF1-206ENST00000560447 SMIM22K7EJ46 135 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 ZNF18P17022 549 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 HSPA1LP34931 641 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 PDE6BP35913 854 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 CDK8P49336 464 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 UBASH3AP57075 661 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 DDR1Q08345 913 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 LRMPQ12912 555 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 PTGDRQ13258 359 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 MFSD14BQ5SR56 506 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 FAM182BQ5T319 152 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 VSTM4Q8IW00 320 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 MPNDQ8N594 471 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 ERCC4Q92889 916 aaPredicted RBP11.03□□□□□ -0.64
RTF1-206ENST00000560447 EYA3Q99504 573 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 TMEM47Q9BQJ4 181 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 HSD3B7Q9H2F3 369 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 CUEDC2Q9H467 287 aa11.03□□□□□ -0.64
RTF1-206ENST00000560447 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
RTF1-206ENST00000560447 COL11A2P13942 1736 aaPredicted RBP11.03□□□□□ -0.64
RTF1-206ENST00000560447 CCDC194A0A1B0GVG4 234 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.65
RTF1-206ENST00000560447 NMT2O60551 498 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 SERPINC1P01008 464 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 GNA11P29992 359 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 DPYDQ12882 1025 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 DIXDC1Q155Q3 683 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 TXNRD1Q16881 649 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 TPD52L1Q16890 204 aaPredicted RBP11.02□□□□□ -0.65
RTF1-206ENST00000560447 PPP1R18Q6NYC8 613 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 HHIPL2Q6UWX4 724 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 KRT25Q7Z3Z0 450 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 TMC6Q7Z403 805 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 FILIP1Q7Z7B0 1213 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 SYMPKQ92797 1274 aaKnown RBP11.02□□□□□ -0.65
RTF1-206ENST00000560447 AK8Q96MA6 479 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 CTAGE1Q96RT6 745 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 ZMYND12Q9H0C1 365 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 TMX4Q9H1E5 349 aaPredicted RBP11.02□□□□□ -0.65
RTF1-206ENST00000560447 POLLQ9UGP5 575 aa11.02□□□□□ -0.65
RTF1-206ENST00000560447 ZNF646O15015 1829 aaPredicted RBP11.01□□□□□ -0.65
RTF1-206ENST00000560447 GOLGA6L9A6NEM1 432 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 STXBP3O00186 592 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 CTIFO43310 598 aaKnown RBP11.01□□□□□ -0.65
RTF1-206ENST00000560447 PARP1P09874 1014 aaKnown RBP11.01□□□□□ -0.65
RTF1-206ENST00000560447 SRGNP10124 158 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 TNNT1P13805 278 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 BMP6P22004 513 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 LMOD1P29536 600 aaPredicted RBP11.01□□□□□ -0.65
RTF1-206ENST00000560447 PPP1R2P41236 205 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 HDLBPQ00341 1268 aaKnown RBP11.01□□□□□ -0.65
RTF1-206ENST00000560447 GRIN1Q05586 938 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 SPAG1Q07617 926 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 E2F4Q16254 413 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 ASPRV1Q53RT3 343 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 EARS2Q5JPH6 523 aaKnown RBP11.01□□□□□ -0.65
RTF1-206ENST00000560447 SPATA1Q5VX52 437 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 PIK3AP1Q6ZUJ8 805 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 NYAP1Q6ZVC0 841 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 MAPKAPK5Q8IW41 473 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 CCAR2Q8N163 923 aaKnown RBP11.01□□□□□ -0.65
RTF1-206ENST00000560447 C4orf32Q8N8J7 132 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 DHX58Q96C10 678 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 DYNLL2Q96FJ2 89 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 PAGE5Q96GU1 130 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 CCSER1Q9C0I3 900 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 PDCL3Q9H2J4 239 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms