RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 JMJD4Q9H9V9 463 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 PCDHA4Q9UN74 947 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 F5H6K3 240 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 FZD9O00144 591 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 PPP6R2O75170 966 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 ZNF202O95125 648 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 KLRC3Q07444 240 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 INF2Q27J81 1249 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 ISM2Q6H9L7 571 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 TMEM179Q6ZVK1 233 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 PDILTQ8N807 584 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 RGS22Q8NE09 1264 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 SDF4Q9BRK5 362 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 GLIS2Q9BZE0 524 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 RIOX1Q9H6W3 641 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 BIN2Q9UBW5 565 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 PCDHA6Q9UN73 950 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 PCDHA8Q9Y5H6 950 aa12.46□□□□□ -0.41
SNRPA1-211ENST00000560433 A0A1W2PQ27 194 aa12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 A0A1W2PQ64 194 aa12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 A0A1W2PQD8 194 aa12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 TRIM75PA6NK02 468 aa12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 LETM1O95202 739 aaPredicted RBP12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 TYRO3Q06418 890 aa12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 KIAA1755Q5JYT7 1200 aa12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 TTC38Q5R3I4 469 aa12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 METTL16Q86W50 562 aaKnown RBP12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 ZBED3Q96IU2 234 aaPredicted RBP12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 TMEM260Q9NX78 707 aa12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 FBXO2Q9UK22 296 aaPredicted RBP12.46□□□□□ -0.42
SNRPA1-211ENST00000560433 GREB1LQ9C091 1923 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 CMA1P23946 247 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 IKQ13123 557 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 ASPRV1Q53RT3 343 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 JAKMIP3Q5VZ66 844 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 KRI1Q8N9T8 703 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 LZTS2Q9BRK4 669 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 CSRNP2Q9H175 543 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 HACL1Q9UJ83 578 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 PTGDRQ13258 359 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 DGKZQ13574 1117 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 ANO6Q4KMQ2 910 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 DLK2Q6UY11 383 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 JMYQ8N9B5 988 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 MTMR14Q8NCE2 650 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 NYAP2Q9P242 653 aa12.45□□□□□ -0.42
SNRPA1-211ENST00000560433 M0R2N6 131 aa12.44□□□□□ -0.42
SNRPA1-211ENST00000560433 BIN1O00499 593 aa12.44□□□□□ -0.42
SNRPA1-211ENST00000560433 FOXN1O15353 648 aa12.44□□□□□ -0.42
SNRPA1-211ENST00000560433 NDUFB10O96000 172 aa12.44□□□□□ -0.42
SNRPA1-211ENST00000560433 CCDC192P0DO97 292 aa12.44□□□□□ -0.42
SNRPA1-211ENST00000560433 CDC25AP30304 524 aa12.44□□□□□ -0.42
SNRPA1-211ENST00000560433 SYKP43405 635 aa12.44□□□□□ -0.42
SNRPA1-211ENST00000560433 EPSTI1Q96J88 318 aa12.44□□□□□ -0.42
SNRPA1-211ENST00000560433 DNAJC25Q9H1X3 360 aa12.44□□□□□ -0.42
SNRPA1-211ENST00000560433 HERC5Q9UII4 1024 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-211ENST00000560433 CCDC194A0A1B0GVG4 234 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 VWA3AA6NCI4 1184 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 PTPREP23469 700 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 CALML3P27482 149 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 UBE2SQ16763 222 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 KIF4BQ2VIQ3 1234 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 LONRF3Q496Y0 759 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 RESP18Q5W5W9 173 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 SASS6Q6UVJ0 657 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 TRPM4Q8TD43 1214 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 MKL1Q969V6 931 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 SYT17Q9BSW7 474 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 SH3GLB2Q9NR46 395 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 PGAP2Q9UHJ9 254 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 NOL7Q9UMY1 257 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 TMEM232C9JQI7 657 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 CUTAO60888 179 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 EPS15P42566 896 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 ZNF280AP59817 542 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 LUZP1Q86V48 1076 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 CCDC148Q8NFR7 591 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 ZBTB21Q9ULJ3 1066 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 LTBP3Q9NS15 1303 aa12.43□□□□□ -0.42
SNRPA1-211ENST00000560433 POLR2DO15514 142 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 IL17AQ16552 155 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 USH1GQ495M9 461 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 NBPF12Q5TAG4 269 aaPredicted RBP12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 RBM43Q6ZSC3 357 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 GRAMD1CQ8IYS0 662 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 TEPSINQ96N21 525 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 UIMC1Q96RL1 719 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 DEFB129Q9H1M3 183 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 KCNH3Q9ULD8 1083 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 KCNA4P22459 653 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 PNOCQ13519 176 aa12.42□□□□□ -0.42
SNRPA1-211ENST00000560433 QRICH1Q2TAL8 776 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms