RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PPM1EQ8WY54 764 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 EVI5LQ96CN4 794 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 COG3Q96JB2 828 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 PGBD1Q96JS3 809 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 ZNF396Q96N95 335 aaPredicted RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 TACO1Q9BSH4 297 aaKnown RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 FHDC1Q9C0D6 1143 aaPredicted RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 IL25Q9H293 177 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 ACBD3Q9H3P7 528 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 ARFGAP3Q9NP61 516 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 METTL5Q9NRN9 209 aaKnown RBP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 SPG7Q9UQ90 795 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 HDAC5Q9UQL6 1122 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 NEO1Q92859 1461 aa6.84□□□□□ -1.31
SNRPA1-209ENST00000560307 TECPR2O15040 1411 aa6.84□□□□□ -1.32
SNRPA1-209ENST00000560307 NPHP4O75161 1426 aaPredicted RBP6.84□□□□□ -1.32
SNRPA1-209ENST00000560307 NCAPD2Q15021 1401 aa6.84□□□□□ -1.32
SNRPA1-209ENST00000560307 KDRP35968 1356 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 KDM3BQ7LBC6 1761 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 A0A1W2PQ27 194 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 A0A1W2PQ64 194 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 A0A1W2PQD8 194 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 FAM83GA6ND36 823 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 MAP2K7O14733 419 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 CLGNO14967 610 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 KINO60870 393 aaKnown RBP6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 SMC2O95347 1197 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 UBTFL1P0CB47 393 aaPredicted RBP6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 RPS6KB1P23443 525 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 TXLNAP40222 546 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 EVCP57679 992 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 MTX1Q13505 466 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 GNL2Q13823 731 aaKnown RBP6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 GNASQ5JWF2 1037 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 CREB3L3Q68CJ9 461 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 RSRC2Q7L4I2 434 aaKnown RBP6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 PRICKLE2Q7Z3G6 844 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 TICAM2Q86XR7 235 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 ERC1Q8IUD2 1116 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 REXO1L1PQ8IX06 675 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 KDF1Q8NAX2 398 aaPredicted RBP6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 ENGASEQ8NFI3 743 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 GOLGA1Q92805 767 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 MAP4K1Q92918 833 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 ZNF622Q969S3 477 aaKnown RBP eCLIP6.83□□□□□ -1.328e-8■□□□□ 10.6
SNRPA1-209ENST00000560307 TGIF2Q9GZN2 237 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 GBP3Q9H0R5 595 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 TMX1Q9H3N1 280 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 TPCN1Q9ULQ1 816 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 HRH3Q9Y5N1 445 aa6.83□□□□□ -1.32
SNRPA1-209ENST00000560307 USP31Q70CQ4 1352 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 MED23Q9ULK4 1368 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 SLIT1O75093 1534 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 H7C1W4 665 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 ARHGAP6O43182 974 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 ERLIN1O75477 346 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 EIF4BP23588 611 aaKnown RBP6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 DNAJA1P31689 397 aaKnown RBP6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 GATA4P43694 442 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 MAP2K3P46734 347 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 TNNI2P48788 182 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 CORO7P57737 925 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 ZRSR1Q15695 479 aaKnown RBP6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 TSHZ3Q63HK5 1081 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 TRIM65Q6PJ69 517 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 POTEAQ6S8J7 498 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 EFCAB13Q8IY85 973 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 SMARCC2Q8TAQ2 1214 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 RHBDD1Q8TEB9 315 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 FBF1Q8TES7 1133 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 CEP89Q96ST8 783 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 FUT8Q9BYC5 575 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 DEF6Q9H4E7 631 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 TRMT1Q9NXH9 659 aaKnown RBP6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 PRKAG2Q9UGJ0 569 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 JRKLQ9Y4A0 524 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 RBM8AQ9Y5S9 174 aaKnown RBP6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 USP16Q9Y5T5 823 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 MRFAP1Q9Y605 127 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 AK5Q9Y6K8 562 aa6.82□□□□□ -1.32
SNRPA1-209ENST00000560307 RICTORQ6R327 1708 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 LAMA4Q16363 1823 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 NRXN3Q9Y4C0 1643 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 GNB5O14775 395 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 SLC27A2O14975 620 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 POLR3GO15318 223 aaPredicted RBP6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 SRGAP3O43295 1099 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 KIF1CO43896 1103 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 CPNE3O75131 537 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 MICAL2O94851 1124 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 HOXB7P09629 217 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 ATP2B1P20020 1258 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 USP8P40818 1118 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 NLRP12P59046 1061 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 ST5P78524 1137 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 EIF4A2Q14240 407 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 ADCK5Q3MIX3 580 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 PRPF40BQ6NWY9 871 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms