RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 NR0B2Q15466 257 aa7.78□□□□□ -1.16
CRNDE-208ENST00000560029 REXO1Q8N1G1 1221 aaKnown RBP7.78□□□□□ -1.16
CRNDE-208ENST00000560029 SEC16BQ96JE7 1060 aa7.78□□□□□ -1.16
CRNDE-208ENST00000560029 REV1Q9UBZ9 1251 aa7.78□□□□□ -1.16
CRNDE-208ENST00000560029 KCNH3Q9ULD8 1083 aa7.78□□□□□ -1.16
CRNDE-208ENST00000560029 SHISA3A0PJX4 238 aa7.77□□□□□ -1.17
CRNDE-208ENST00000560029 EFEMP2O95967 443 aa7.77□□□□□ -1.17
CRNDE-208ENST00000560029 SYN1P17600 705 aa7.77□□□□□ -1.17
CRNDE-208ENST00000560029 COL9A2Q14055 689 aaPredicted RBP7.77□□□□□ -1.17
CRNDE-208ENST00000560029 VMACQ2NL98 169 aa7.77□□□□□ -1.17
CRNDE-208ENST00000560029 FBXW10Q5XX13 1052 aa7.77□□□□□ -1.17
CRNDE-208ENST00000560029 SYTL4Q96C24 671 aaPredicted RBP7.77□□□□□ -1.17
CRNDE-208ENST00000560029 FERD3LQ96RJ6 166 aa7.77□□□□□ -1.17
CRNDE-208ENST00000560029 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.77□□□□□ -1.17
CRNDE-208ENST00000560029 TANGO6Q9C0B7 1094 aa7.77□□□□□ -1.17
CRNDE-208ENST00000560029 EHMT1Q9H9B1 1298 aa7.77□□□□□ -1.17
CRNDE-208ENST00000560029 PRR36Q9H6K5 1346 aa7.77□□□□□ -1.17
CRNDE-208ENST00000560029 ATE1O95260 518 aa7.76□□□□□ -1.17
CRNDE-208ENST00000560029 TEKQ02763 1124 aa7.76□□□□□ -1.17
CRNDE-208ENST00000560029 ADGRF1Q5T601 910 aa7.76□□□□□ -1.17
CRNDE-208ENST00000560029 MCF2L2Q86YR7 1114 aa7.76□□□□□ -1.17
CRNDE-208ENST00000560029 SPPL2CQ8IUH8 684 aa7.76□□□□□ -1.17
CRNDE-208ENST00000560029 FAM13CQ8NE31 585 aa7.76□□□□□ -1.17
CRNDE-208ENST00000560029 CPLX3Q8WVH0 158 aa7.76□□□□□ -1.17
CRNDE-208ENST00000560029 GMLQ99445 158 aa7.76□□□□□ -1.17
CRNDE-208ENST00000560029 ANTXR1Q9H6X2 564 aa7.76□□□□□ -1.17
CRNDE-208ENST00000560029 OTOL1A6NHN0 477 aaPredicted RBP7.75□□□□□ -1.17
CRNDE-208ENST00000560029 NOTOA8MTQ0 251 aa7.75□□□□□ -1.17
CRNDE-208ENST00000560029 RFXAPO00287 272 aa7.75□□□□□ -1.17
CRNDE-208ENST00000560029 FGRP09769 529 aa7.75□□□□□ -1.17
CRNDE-208ENST00000560029 SDHBP21912 280 aa7.75□□□□□ -1.17
CRNDE-208ENST00000560029 KRTAP10-2P60368 255 aa7.75□□□□□ -1.17
CRNDE-208ENST00000560029 CYB5D2Q8WUJ1 264 aa7.75□□□□□ -1.17
CRNDE-208ENST00000560029 XYLT2Q9H1B5 865 aa7.75□□□□□ -1.17
CRNDE-208ENST00000560029 KLHL3Q9UH77 587 aa7.75□□□□□ -1.17
CRNDE-208ENST00000560029 ADAM30Q9UKF2 790 aa7.75□□□□□ -1.17
CRNDE-208ENST00000560029 ZNRF3Q9ULT6 936 aa7.75□□□□□ -1.17
CRNDE-208ENST00000560029 DNAJA2O60884 412 aa7.74□□□□□ -1.17
CRNDE-208ENST00000560029 SSBP05455 408 aaKnown RBP eCLIP7.74□□□□□ -1.17
CRNDE-208ENST00000560029 EPHB3P54753 998 aa7.74□□□□□ -1.17
CRNDE-208ENST00000560029 SRSF3P84103 164 aaKnown RBP7.74□□□□□ -1.17
CRNDE-208ENST00000560029 TMEM201Q5SNT2 666 aa7.74□□□□□ -1.17
CRNDE-208ENST00000560029 ZDHHC14Q8IZN3 488 aa7.74□□□□□ -1.17
CRNDE-208ENST00000560029 FEZF2Q8TBJ5 459 aa7.74□□□□□ -1.17
CRNDE-208ENST00000560029 SREK1Q8WXA9 508 aaKnown RBP7.74□□□□□ -1.17
CRNDE-208ENST00000560029 SRRTQ9BXP5 876 aaKnown RBP7.74□□□□□ -1.17
CRNDE-208ENST00000560029 PPP1R1BQ9UD71 204 aaPredicted RBP7.74□□□□□ -1.17
CRNDE-208ENST00000560029 MRVI1Q9Y6F6 885 aa7.74□□□□□ -1.17
CRNDE-208ENST00000560029 OR14I1A6ND48 311 aa7.73□□□□□ -1.17
CRNDE-208ENST00000560029 CHURC1-FNTBB4DL54 471 aa7.73□□□□□ -1.17
CRNDE-208ENST00000560029 CHRNEQ04844 493 aa7.73□□□□□ -1.17
CRNDE-208ENST00000560029 SNX17Q15036 470 aa7.73□□□□□ -1.17
CRNDE-208ENST00000560029 SKOR2Q2VWA4 1001 aaPredicted RBP7.73□□□□□ -1.17
CRNDE-208ENST00000560029 KRTAP5-3Q6L8H2 238 aa7.73□□□□□ -1.17
CRNDE-208ENST00000560029 GGNQ86UU5 652 aa7.73□□□□□ -1.17
CRNDE-208ENST00000560029 MBD1Q9UIS9 605 aaPredicted RBP7.73□□□□□ -1.17
CRNDE-208ENST00000560029 IRAK3Q9Y616 596 aa7.73□□□□□ -1.17
CRNDE-208ENST00000560029 SLC22A31A6NKX4 558 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 USP2O75604 605 aaPredicted RBP7.72□□□□□ -1.17
CRNDE-208ENST00000560029 ATP2B1P20020 1258 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 RPL10P27635 214 aaKnown RBP7.72□□□□□ -1.17
CRNDE-208ENST00000560029 EIF6P56537 245 aaKnown RBP7.72□□□□□ -1.17
CRNDE-208ENST00000560029 DUSP4Q13115 394 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 MLECQ14165 292 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 SF3A1Q15459 793 aaKnown RBP7.72□□□□□ -1.17
CRNDE-208ENST00000560029 OVOS1Q6IE37 1185 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 ANKS4BQ8N8V4 417 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 RNF141Q8WVD5 230 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 LINC01599Q8WXQ3 324 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 ANAPC16Q96DE5 110 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 CRBNQ96SW2 442 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 G6PC3Q9BUM1 346 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 RTEL1Q9NZ71 1219 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 STRIP2Q9ULQ0 834 aa7.72□□□□□ -1.17
CRNDE-208ENST00000560029 IMPDH2P12268 514 aa7.71□□□□□ -1.18
CRNDE-208ENST00000560029 AFF3P51826 1226 aaKnown RBP7.71□□□□□ -1.18
CRNDE-208ENST00000560029 CLEC16AQ2KHT3 1053 aa7.71□□□□□ -1.18
CRNDE-208ENST00000560029 PRRT2Q7Z6L0 340 aaPredicted RBP7.71□□□□□ -1.18
CRNDE-208ENST00000560029 LSRQ86X29 649 aaPredicted RBP7.71□□□□□ -1.18
CRNDE-208ENST00000560029 TMEM151BQ8IW70 566 aa7.71□□□□□ -1.18
CRNDE-208ENST00000560029 SYT8Q8NBV8 401 aa7.71□□□□□ -1.18
CRNDE-208ENST00000560029 SHDQ96IW2 340 aa7.71□□□□□ -1.18
CRNDE-208ENST00000560029 SIGLEC10Q96LC7 697 aa7.71□□□□□ -1.18
CRNDE-208ENST00000560029 KREMEN1Q96MU8 473 aa7.71□□□□□ -1.18
CRNDE-208ENST00000560029 EPB41L4AQ9HCS5 686 aaPredicted RBP7.71□□□□□ -1.18
CRNDE-208ENST00000560029 SIRT5Q9NXA8 310 aa7.71□□□□□ -1.18
CRNDE-208ENST00000560029 GMIPQ9P107 970 aa7.71□□□□□ -1.18
CRNDE-208ENST00000560029 SASH1O94885 1247 aa7.7□□□□□ -1.18
CRNDE-208ENST00000560029 GTF2F1P35269 517 aaKnown RBP eCLIP7.7□□□□□ -1.18
CRNDE-208ENST00000560029 YARSP54577 528 aaKnown RBP7.7□□□□□ -1.18
CRNDE-208ENST00000560029 ARSHQ5FYA8 562 aa7.7□□□□□ -1.18
CRNDE-208ENST00000560029 RUFY4Q6ZNE9 571 aa7.7□□□□□ -1.18
CRNDE-208ENST00000560029 DBX2Q6ZNG2 339 aa7.7□□□□□ -1.18
CRNDE-208ENST00000560029 NLRX1Q86UT6 975 aa7.7□□□□□ -1.18
CRNDE-208ENST00000560029 DACT3Q96B18 629 aaPredicted RBP7.7□□□□□ -1.18
CRNDE-208ENST00000560029 ATG4CQ96DT6 458 aa7.7□□□□□ -1.18
CRNDE-208ENST00000560029 USP35Q9P2H5 1018 aa7.7□□□□□ -1.18
CRNDE-208ENST00000560029 MEIS3P2A8K0S8 358 aa7.69□□□□□ -1.18
CRNDE-208ENST00000560029 VIPR1P32241 457 aa7.69□□□□□ -1.18
CRNDE-208ENST00000560029 ETFBP38117 255 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms