RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 RLFQ13129 1914 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 TMEM88BA6NKF7 163 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 JAK2O60674 1132 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 PLA2G6O60733 806 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 PPFIA3O75145 1194 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 IFNAR1P17181 557 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 SMARCA1P28370 1054 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 DDIT3P35638 169 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 HMGCS2P54868 508 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 PPP2R5BQ15173 497 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 ZYXQ15942 572 aaKnown RBP10.93□□□□□ -0.66
HERC1-206ENST00000559996 PKN1Q16512 942 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 RTN1Q16799 776 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 SPRYD7Q5W111 196 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 GPAT2Q6NUI2 795 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 DCAF4Q8WV16 495 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 INTS4Q96HW7 963 aaKnown RBP10.93□□□□□ -0.66
HERC1-206ENST00000559996 IPO9Q96P70 1041 aaKnown RBP10.93□□□□□ -0.66
HERC1-206ENST00000559996 UBA5Q9GZZ9 404 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 MTMR7Q9Y216 660 aa10.93□□□□□ -0.66
HERC1-206ENST00000559996 BAZ2BQ9UIF8 2168 aaKnown RBP10.93□□□□□ -0.66
HERC1-206ENST00000559996 FRMPD2Q68DX3 1309 aaPredicted RBP10.92□□□□□ -0.66
HERC1-206ENST00000559996 TESPA1A2RU30 521 aaPredicted RBP10.92□□□□□ -0.66
HERC1-206ENST00000559996 KLRF2D3W0D1 207 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 PARP1P09874 1014 aaKnown RBP10.92□□□□□ -0.66
HERC1-206ENST00000559996 BMP3P12645 472 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 VCAM1P19320 739 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 SLC16A2P36021 539 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 USP14P54578 494 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 ASPRV1Q53RT3 343 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 FAM83BQ5T0W9 1011 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 TREML2Q5T2D2 321 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 RGMBQ6NW40 437 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 SYNE3Q6ZMZ3 975 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 CATSPERGQ6ZRH7 1159 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 RASAL3Q86YV0 1011 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 IFNLR1Q8IU57 520 aaPredicted RBP10.92□□□□□ -0.66
HERC1-206ENST00000559996 SPOCK2Q92563 424 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 LPAR1Q92633 364 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 HHIPL1Q96JK4 782 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 ZIC5Q96T25 663 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 PTPN18Q99952 460 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 LLPHQ9BRT6 129 aaKnown RBP10.92□□□□□ -0.66
HERC1-206ENST00000559996 JMJD4Q9H9V9 463 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 GPCPD1Q9NPB8 672 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 RBM28Q9NW13 759 aaKnown RBP10.92□□□□□ -0.66
HERC1-206ENST00000559996 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.92□□□□□ -0.66
HERC1-206ENST00000559996 ADAMTS5Q9UNA0 930 aa10.92□□□□□ -0.66
HERC1-206ENST00000559996 CNTNAP5Q8WYK1 1306 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 TMEM232C9JQI7 657 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 WDR46O15213 610 aaKnown RBP10.91□□□□□ -0.66
HERC1-206ENST00000559996 PRPF3O43395 683 aaKnown RBP10.91□□□□□ -0.66
HERC1-206ENST00000559996 HOXA7P31268 230 aaPredicted RBP10.91□□□□□ -0.66
HERC1-206ENST00000559996 ANP32AP39687 249 aaKnown RBP10.91□□□□□ -0.66
HERC1-206ENST00000559996 SLC1A4P43007 532 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 APLP1P51693 650 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 GPATCH4Q5T3I0 446 aaKnown RBP10.91□□□□□ -0.66
HERC1-206ENST00000559996 ADGRF4Q8IZF3 695 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 CCDC82Q8N4S0 544 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 PHKBQ93100 1093 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 SPZ1Q9BXG8 430 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 SH2D4AQ9H788 454 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 FBXO28Q9NVF7 368 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 NAP1L2Q9ULW6 460 aaPredicted RBP10.91□□□□□ -0.66
HERC1-206ENST00000559996 PARP14Q460N5 1801 aa10.91□□□□□ -0.66
HERC1-206ENST00000559996 hCG_1642624A0A1W2PR95 340 aa10.9□□□□□ -0.66
HERC1-206ENST00000559996 PPP1R11O60927 126 aaPredicted RBP10.9□□□□□ -0.66
HERC1-206ENST00000559996 FMNL1O95466 1100 aaPredicted RBP10.9□□□□□ -0.66
HERC1-206ENST00000559996 SLC10A3P09131 477 aa10.9□□□□□ -0.66
HERC1-206ENST00000559996 ZBTB48P10074 688 aaPredicted RBP10.9□□□□□ -0.66
HERC1-206ENST00000559996 GNAQP50148 359 aa10.9□□□□□ -0.66
HERC1-206ENST00000559996 BECN1Q14457 450 aa10.9□□□□□ -0.66
HERC1-206ENST00000559996 SPRYD3Q8NCJ5 442 aa10.9□□□□□ -0.66
HERC1-206ENST00000559996 PROCA1Q8NCQ7 364 aaPredicted RBP10.9□□□□□ -0.66
HERC1-206ENST00000559996 CTCFLQ8NI51 663 aaPredicted RBP10.9□□□□□ -0.66
HERC1-206ENST00000559996 BRI3BPQ8WY22 251 aa10.9□□□□□ -0.66
HERC1-206ENST00000559996 AIFM3Q96NN9 605 aa10.9□□□□□ -0.66
HERC1-206ENST00000559996 RPAP3Q9H6T3 665 aaPredicted RBP10.9□□□□□ -0.66
HERC1-206ENST00000559996 V9GY48 417 aaPredicted RBP10.9□□□□□ -0.66
HERC1-206ENST00000559996 SMCHD1A6NHR9 2005 aa10.9□□□□□ -0.66
HERC1-206ENST00000559996 LOC285556D6RIA3 1793 aa10.9□□□□□ -0.67
HERC1-206ENST00000559996 CCDC196A0A1B0GTZ2 297 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 PTPDC1A2A3K4 754 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 RASSF10A6NK89 507 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 ADAMTS3O15072 1205 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 GJB2P29033 226 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 KIF5BP33176 963 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 ZNF157P51786 506 aaPredicted RBP10.89□□□□□ -0.67
HERC1-206ENST00000559996 REPS2Q8NFH8 660 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 PIGSQ96S52 555 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 FEZ1Q99689 392 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 LZTS2Q9BRK4 669 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 RNF26Q9BY78 433 aaPredicted RBP10.89□□□□□ -0.67
HERC1-206ENST00000559996 GJB4Q9NTQ9 266 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 FEM1BQ9UK73 627 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 PRR12Q9ULL5 1215 aa10.89□□□□□ -0.67
HERC1-206ENST00000559996 ZNF536O15090 1300 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 STK36Q9NRP7 1315 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms