RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 PARP1P09874 1014 aaKnown RBP9.17□□□□□ -0.94
SMAD3-212ENST00000559937 NPR1P16066 1061 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 CDK11BP21127 795 aaKnown RBP9.17□□□□□ -0.94
SMAD3-212ENST00000559937 GNA11P29992 359 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 HOXA7P31268 230 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-212ENST00000559937 FMR1Q06787 632 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMAD3-212ENST00000559937 SPAG1Q07617 926 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 NOM1Q5C9Z4 860 aaKnown RBP9.17□□□□□ -0.94
SMAD3-212ENST00000559937 CDKAL1Q5VV42 579 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 E4F1Q66K89 784 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-212ENST00000559937 SPECC1LQ69YQ0 1117 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 WWC2Q6AWC2 1192 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 PDXDC2PQ6P474 469 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 USP17L1Q7RTZ2 530 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 GRAMD1CQ8IYS0 662 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 PROM2Q8N271 834 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 STAG2Q8N3U4 1231 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 FLAD1Q8NFF5 587 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 KIF18AQ8NI77 898 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 ANKRD7Q92527 254 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 DPF2Q92785 391 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 AK8Q96MA6 479 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 CCSER1Q9C0I3 900 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 ZMYND12Q9H0C1 365 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 C6orf50Q9HD87 102 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 POLLQ9UGP5 575 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 SWAP70Q9UH65 585 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 ATP6V0A2Q9Y487 856 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 PHLPP2Q6ZVD8 1323 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 USP27XA6NNY8 438 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 PPP1R3GB7ZBB8 358 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 C6orf229H3BNL8 230 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 ZSCAN12O43309 604 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 CYTH3O43739 400 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 STX10O60499 249 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 ALDH1B1P30837 517 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 MCM7P33993 719 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 AFMP43652 599 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 KCNB1Q14721 858 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 SLC35G1Q2M3R5 365 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 ASPRV1Q53RT3 343 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 PPP1R18Q6NYC8 613 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 DTHD1Q6ZMT9 781 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 NLGN1Q8N2Q7 840 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 GPKOWQ92917 476 aaPredicted RBP eCLIP9.16□□□□□ -0.94
SMAD3-212ENST00000559937 RRP36Q96EU6 259 aaKnown RBP9.16□□□□□ -0.94
SMAD3-212ENST00000559937 PPP1R13BQ96KQ4 1090 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 GPR101Q96P66 508 aaPredicted RBP9.16□□□□□ -0.94
SMAD3-212ENST00000559937 RIOX1Q9H6W3 641 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 INTS13Q9NVM9 706 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 SAP30BPQ9UHR5 308 aaKnown RBP9.16□□□□□ -0.94
SMAD3-212ENST00000559937 PCDHA6Q9UN73 950 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 STX8Q9UNK0 236 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 DAGLAQ9Y4D2 1042 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 PCDHA8Q9Y5H6 950 aa9.16□□□□□ -0.94
SMAD3-212ENST00000559937 MYH7BA7E2Y1 1941 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 ITIH6Q6UXX5 1313 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 IGKV6D-41A0A0C4DH26 115 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 TMEM232C9JQI7 657 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 VEGFAP15692 232 aaPredicted RBP9.15□□□□□ -0.94
SMAD3-212ENST00000559937 PPP1R2P41236 205 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 NAPAP54920 295 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 FKBP1AP62942 108 aaKnown RBP9.15□□□□□ -0.94
SMAD3-212ENST00000559937 RBM10P98175 930 aaKnown RBP9.15□□□□□ -0.94
SMAD3-212ENST00000559937 GABPAQ06546 454 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 NR1I3Q14994 352 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 NONOQ15233 471 aaKnown RBP eCLIP9.15□□□□□ -0.942e-6■■■■□ 19.8
SMAD3-212ENST00000559937 TXNRD1Q16881 649 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 ZNF827Q17R98 1081 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 FILIP1LQ4L180 1135 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 SOGA3Q5TF21 947 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 ZNF658Q5TYW1 1059 aaPredicted RBP9.15□□□□□ -0.94
SMAD3-212ENST00000559937 TYW1BQ6NUM6 668 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 HHIPL2Q6UWX4 724 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 APTXQ7Z2E3 356 aaKnown RBP9.15□□□□□ -0.94
SMAD3-212ENST00000559937 TMEM139Q8IV31 216 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 SLC44A5Q8NCS7 719 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 MED15Q96RN5 788 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 NAA15Q9BXJ9 866 aaKnown RBP9.15□□□□□ -0.94
SMAD3-212ENST00000559937 DISC1Q9NRI5 854 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 SEC63Q9UGP8 760 aaKnown RBP9.15□□□□□ -0.94
SMAD3-212ENST00000559937 LIMA1Q9UHB6 759 aaKnown RBP9.15□□□□□ -0.94
SMAD3-212ENST00000559937 RWDD2AQ9UIY3 292 aa9.15□□□□□ -0.94
SMAD3-212ENST00000559937 RPN1P04843 607 aaKnown RBP9.14□□□□□ -0.95
SMAD3-212ENST00000559937 OR52Z1P0C646 297 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 SNHG28P0DPA3 235 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 SRGNP10124 158 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 CD44P16070 742 aaKnown RBP9.14□□□□□ -0.95
SMAD3-212ENST00000559937 PDE6BP35913 854 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 PBX1P40424 430 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 STAT6P42226 847 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 TRIM14Q14142 442 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 IL17AQ16552 155 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 GLIPR1L2Q4G1C9 344 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 HEATR3Q7Z4Q2 680 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 NEK8Q86SG6 692 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 SLC51AQ86UW1 340 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 TRMT44Q8IYL2 757 aaKnown RBP9.14□□□□□ -0.95
SMAD3-212ENST00000559937 ZNF710Q8N1W2 664 aa9.14□□□□□ -0.95
SMAD3-212ENST00000559937 ANKRD20A12PQ8NF67 263 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms