RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 ADCY3O60266 1144 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 CAPN15O75808 1086 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 PDHBP11177 359 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 ERCC3P19447 782 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 IFIT1BQ5T764 474 aaKnown RBP16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 SLAIN1Q8ND83 568 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 PNMA1Q8ND90 353 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 REPS2Q8NFH8 660 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 SLC38A10Q9HBR0 1119 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 ERICH2A1L162 156 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 ATP2A1O14983 1001 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 SNHG28P0DPA3 235 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 SART3Q15020 963 aaKnown RBP16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 CCDC96Q2M329 555 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 NCAPG2Q86XI2 1143 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 SH3TC2Q8TF17 1288 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 TEX13BQ9BXU2 312 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 REC8O95072 547 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 PTPREP23469 700 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 SEC23AQ15436 765 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 MORN1Q5T089 497 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 RIOX2Q8IUF8 465 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 ZNF333Q96JL9 665 aa16.03■□□□□ 0.16
CHRNB4-204ENST00000559849 SLC15A5A6NIM6 579 aa16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 IFIT3O14879 490 aaKnown RBP16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 COPB2P35606 906 aa16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 OAZ1P54368 228 aa16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 RASGRP2Q7LDG7 609 aa16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 MB21D2Q8IYB1 491 aaPredicted RBP16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 USP6NLQ92738 828 aa16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 BIN2Q9UBW5 565 aaPredicted RBP16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 BRCA2P51587 3418 aa16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 PLXNB2O15031 1838 aa16.02■□□□□ 0.15
CHRNB4-204ENST00000559849 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 CYP2B6P20813 491 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 RGS2P41220 211 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 ZNF543Q08ER8 600 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 MAP2K5Q13163 448 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 GPATCH4Q5T3I0 446 aaKnown RBP16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 BTNL9Q6UXG8 535 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 MTA3Q9BTC8 594 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 PRR12Q9ULL5 1215 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 ELNP15502 786 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 MCM5P33992 734 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 GRB14Q14449 540 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 TSGA10IPQ3SY00 556 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 SNRNP48Q6IEG0 339 aaKnown RBP16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 TTBK2Q6IQ55 1244 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 CHST3Q7LGC8 479 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 GPCPD1Q9NPB8 672 aa16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 FRMPD2Q68DX3 1309 aaPredicted RBP16.01■□□□□ 0.15
CHRNB4-204ENST00000559849 FCER1AP12319 257 aa16■□□□□ 0.15
CHRNB4-204ENST00000559849 UBXN2AP68543 259 aa16■□□□□ 0.15
CHRNB4-204ENST00000559849 TRMT44Q8IYL2 757 aaKnown RBP16■□□□□ 0.15
CHRNB4-204ENST00000559849 ABRAQ8N0Z2 381 aa16■□□□□ 0.15
CHRNB4-204ENST00000559849 IGDCC4Q8TDY8 1250 aa16■□□□□ 0.15
CHRNB4-204ENST00000559849 RAVER2Q9HCJ3 691 aaKnown RBP16■□□□□ 0.15
CHRNB4-204ENST00000559849 ZNFX1Q9P2E3 1918 aaKnown RBP16■□□□□ 0.15
CHRNB4-204ENST00000559849 EPB41L2O43491 1005 aaKnown RBP15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 SLC16A2P36021 539 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 ANTXR2P58335 489 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 WTAPQ15007 396 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 TMEM67Q5HYA8 995 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 HOXC6P09630 235 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 PRKCSHP14314 528 aaPredicted RBP15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 ADORA2AP29274 412 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 SLC4A3P48751 1232 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 KRT32Q14532 448 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 SYDE2Q5VT97 1194 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 DPP9Q86TI2 863 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 TMTC2Q8N394 836 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 TMEM106CQ9BVX2 250 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 RIPK3Q9Y572 518 aa15.99■□□□□ 0.15
CHRNB4-204ENST00000559849 PRC1O43663 620 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 GOLGA8HP0CJ92 632 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 KCTD2Q14681 263 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 ASPRV1Q53RT3 343 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 RASEFQ8IZ41 740 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 TMEM87BQ96K49 555 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 NEK1Q96PY6 1258 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 APBA2Q99767 749 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 SLC5A4Q9NY91 659 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 ZNF536O15090 1300 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 HMGCRP04035 888 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 PARP1P09874 1014 aaKnown RBP15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 HSPA4P34932 840 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 RANBP17Q9H2T7 1088 aaKnown RBP15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 FBXO40Q9UH90 709 aa15.98■□□□□ 0.15
CHRNB4-204ENST00000559849 MYCP01106 439 aaPredicted RBP15.97■□□□□ 0.15
CHRNB4-204ENST00000559849 INHAP05111 366 aa15.97■□□□□ 0.15
CHRNB4-204ENST00000559849 CHST13Q8NET6 341 aa15.97■□□□□ 0.15
CHRNB4-204ENST00000559849 TRIB2Q92519 343 aa15.97■□□□□ 0.15
CHRNB4-204ENST00000559849 KCNB2Q92953 911 aa15.97■□□□□ 0.15
CHRNB4-204ENST00000559849 AGBL1Q96MI9 1066 aa15.97■□□□□ 0.15
CHRNB4-204ENST00000559849 MMP19Q99542 508 aa15.97■□□□□ 0.15
CHRNB4-204ENST00000559849 MTFR1Q15390 333 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 TKFCQ3LXA3 575 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 CCDC174Q6PII3 467 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms