RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 GOPCQ9HD26 462 aa20■□□□□ 0.79
CHRNA3-206ENST00000559658 SMCHD1A6NHR9 2005 aa19.99■□□□□ 0.79
CHRNA3-206ENST00000559658 TRIM75PA6NK02 468 aa19.99■□□□□ 0.79
CHRNA3-206ENST00000559658 SPP2Q13103 211 aa19.99■□□□□ 0.79
CHRNA3-206ENST00000559658 RRP36Q96EU6 259 aaKnown RBP19.99■□□□□ 0.79
CHRNA3-206ENST00000559658 FBXO28Q9NVF7 368 aa19.99■□□□□ 0.79
CHRNA3-206ENST00000559658 PARP14Q460N5 1801 aa19.99■□□□□ 0.79
CHRNA3-206ENST00000559658 PDIA4P13667 645 aaKnown RBP19.99■□□□□ 0.79
CHRNA3-206ENST00000559658 PICK1Q9NRD5 415 aa19.99■□□□□ 0.79
CHRNA3-206ENST00000559658 SYNPO2Q9UMS6 1093 aa19.99■□□□□ 0.79
CHRNA3-206ENST00000559658 ZHX2Q9Y6X8 837 aa19.99■□□□□ 0.79
CHRNA3-206ENST00000559658 SMARCA1P28370 1054 aa19.98■□□□□ 0.79
CHRNA3-206ENST00000559658 CEBPZQ03701 1054 aaKnown RBP19.98■□□□□ 0.79
CHRNA3-206ENST00000559658 NOL9Q5SY16 702 aaKnown RBP19.98■□□□□ 0.79
CHRNA3-206ENST00000559658 COA7Q96BR5 231 aa19.98■□□□□ 0.79
CHRNA3-206ENST00000559658 MTMR8Q96EF0 704 aa19.98■□□□□ 0.79
CHRNA3-206ENST00000559658 ZSCAN16Q9H4T2 348 aaPredicted RBP19.98■□□□□ 0.79
CHRNA3-206ENST00000559658 EMILIN3Q9NT22 766 aa19.98■□□□□ 0.79
CHRNA3-206ENST00000559658 LMBRD1Q9NUN5 540 aa19.98■□□□□ 0.79
CHRNA3-206ENST00000559658 BARHL2Q9NY43 387 aa19.98■□□□□ 0.79
CHRNA3-206ENST00000559658 PRPF40AO75400 957 aaKnown RBP19.97■□□□□ 0.79
CHRNA3-206ENST00000559658 U2AF2P26368 475 aaKnown RBP eCLIP19.97■□□□□ 0.79
CHRNA3-206ENST00000559658 IKQ13123 557 aaPredicted RBP19.97■□□□□ 0.79
CHRNA3-206ENST00000559658 RASGRP4Q8TDF6 673 aa19.97■□□□□ 0.79
CHRNA3-206ENST00000559658 USP28Q96RU2 1077 aa19.97■□□□□ 0.79
CHRNA3-206ENST00000559658 KIAA1683Q9H0B3 1180 aa19.97■□□□□ 0.79
CHRNA3-206ENST00000559658 ZNF408Q9H9D4 720 aa19.97■□□□□ 0.79
CHRNA3-206ENST00000559658 CDC37Q16543 378 aaPredicted RBP19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 QRICH1Q2TAL8 776 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 TPRNQ4KMQ1 711 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 SAMD1Q6SPF0 538 aaPredicted RBP19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 SH2D4AQ9H788 454 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 RBM27Q9P2N5 1060 aaKnown RBP19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 SEC63Q9UGP8 760 aaKnown RBP19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 ATP6V1DQ9Y5K8 247 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 GADD45BO75293 160 aaPredicted RBP19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 MAP3K9P80192 1104 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 SYDE2Q5VT97 1194 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 MYSM1Q5VVJ2 828 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 ZNF280CQ8ND82 737 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 TNFRSF25Q93038 417 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 ELP3Q9H9T3 547 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 GINM1Q9NU53 330 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 PRR12Q9ULL5 1215 aa19.96■□□□□ 0.79
CHRNA3-206ENST00000559658 WNT7AO00755 349 aa19.95■□□□□ 0.78
CHRNA3-206ENST00000559658 PPP1R12BO60237 982 aaPredicted RBP19.95■□□□□ 0.78
CHRNA3-206ENST00000559658 VCAM1P19320 739 aa19.95■□□□□ 0.78
CHRNA3-206ENST00000559658 HMGCS2P54868 508 aa19.95■□□□□ 0.78
CHRNA3-206ENST00000559658 NLRP5P59047 1200 aa19.95■□□□□ 0.78
CHRNA3-206ENST00000559658 TTLL12Q14166 644 aaPredicted RBP19.95■□□□□ 0.78
CHRNA3-206ENST00000559658 BTNL9Q6UXG8 535 aa19.95■□□□□ 0.78
CHRNA3-206ENST00000559658 NOSTRINQ8IVI9 506 aa19.95■□□□□ 0.78
CHRNA3-206ENST00000559658 WDR18Q9BV38 432 aa19.95■□□□□ 0.78
CHRNA3-206ENST00000559658 RLFQ13129 1914 aa19.95■□□□□ 0.78
CHRNA3-206ENST00000559658 DDX11L8A8MPP1 907 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 ZBTB5O15062 677 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 KRT2P35908 639 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 STAT2P52630 851 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 NAPAP54920 295 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 BACE1P56817 501 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 GNL2Q13823 731 aaKnown RBP19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 RGS22Q8NE09 1264 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 CLIC4Q9Y696 253 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 PNMA6FA0A0J9YX94 578 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 XBP1P17861 261 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 KRT85P78386 507 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 BRAPQ7Z569 592 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 KIFC2Q96AC6 838 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 FOXP1Q9H334 677 aaPredicted RBP19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 AFG3L2Q9Y4W6 797 aa19.94■□□□□ 0.78
CHRNA3-206ENST00000559658 IREB2P48200 963 aaKnown RBP19.93■□□□□ 0.78
CHRNA3-206ENST00000559658 TOB1P50616 345 aaPredicted RBP19.93■□□□□ 0.78
CHRNA3-206ENST00000559658 SAFBQ15424 915 aaKnown RBP eCLIP19.93■□□□□ 0.78
CHRNA3-206ENST00000559658 SH3GLB2Q9NR46 395 aa19.93■□□□□ 0.78
CHRNA3-206ENST00000559658 M0R2N6 131 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 NF2P35240 595 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 LDHDQ86WU2 507 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 LEO1Q8WVC0 666 aaPredicted RBP19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 CSADQ9Y600 493 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 LOC285556D6RIA3 1793 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 DCAF8L1A6NGE4 600 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 TMEM87AQ8NBN3 555 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 OTUD5Q96G74 571 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 TANGO6Q9C0B7 1094 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 RPAP3Q9H6T3 665 aaPredicted RBP19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 AS3MTQ9HBK9 375 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 PCDHA4Q9UN74 947 aa19.92■□□□□ 0.78
CHRNA3-206ENST00000559658 COL11A1P12107 1806 aaPredicted RBP19.91■□□□□ 0.78
CHRNA3-206ENST00000559658 WDR46O15213 610 aaKnown RBP19.91■□□□□ 0.78
CHRNA3-206ENST00000559658 MAP3K11Q16584 847 aa19.91■□□□□ 0.78
CHRNA3-206ENST00000559658 USH1GQ495M9 461 aa19.91■□□□□ 0.78
CHRNA3-206ENST00000559658 BLIDQ8IZY5 108 aa19.91■□□□□ 0.78
CHRNA3-206ENST00000559658 GPT2Q8TD30 523 aa19.91■□□□□ 0.78
CHRNA3-206ENST00000559658 LPAR1Q92633 364 aa19.91■□□□□ 0.78
CHRNA3-206ENST00000559658 WNK4Q96J92 1243 aa19.91■□□□□ 0.78
CHRNA3-206ENST00000559658 ZMYND12Q9H0C1 365 aa19.91■□□□□ 0.78
CHRNA3-206ENST00000559658 SMCO2A6NFE2 343 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 CCDC174Q6PII3 467 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 PIK3AP1Q6ZUJ8 805 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 CCDC148Q8NFR7 591 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms