RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ZNF214Q9UL59 606 aaPredicted RBP14.88□□□□□ -0.03
LRRC28-214ENST00000559433 ZNF213O14771 459 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 HOXC6P09630 235 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 PCP11498 1178 aaKnown RBP14.87□□□□□ -0.03
LRRC28-214ENST00000559433 FCER1AP12319 257 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 COPB2P35606 906 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 STAT3P40763 770 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 SLC1A4P43007 532 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 NECAB2Q7Z6G3 386 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 REPS2Q8NFH8 660 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 STAG1Q8WVM7 1258 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 GMCL1Q96IK5 515 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 MMP19Q99542 508 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 DSCC1Q9BVC3 393 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 CRISPLD2Q9H0B8 497 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 RNF41Q9H4P4 317 aaPredicted RBP14.87□□□□□ -0.03
LRRC28-214ENST00000559433 NR2E3Q9Y5X4 410 aa14.87□□□□□ -0.03
LRRC28-214ENST00000559433 TMEM232C9JQI7 657 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 ZBED4O75132 1171 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 MCCP23508 829 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 CNGA1P29973 690 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 CCND3P30281 292 aaPredicted RBP14.86□□□□□ -0.03
LRRC28-214ENST00000559433 STAT2P52630 851 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 IKQ13123 557 aaPredicted RBP14.86□□□□□ -0.03
LRRC28-214ENST00000559433 SNRNP48Q6IEG0 339 aaKnown RBP14.86□□□□□ -0.03
LRRC28-214ENST00000559433 UBE2Q1Q7Z7E8 422 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 ABRAQ8N0Z2 381 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 TEX13BQ9BXU2 312 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 MTMR7Q9Y216 660 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 NEDD4P46934 1319 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 RAD50Q92878 1312 aa14.86□□□□□ -0.03
LRRC28-214ENST00000559433 COBLO75128 1261 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 CYP2C19P33261 490 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 NOVP48745 357 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 KCTD2Q14681 263 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 CPXCR1Q8N123 301 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 ANKLE1Q8NAG6 615 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 IL25Q9H293 177 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 SLC38A10Q9HBR0 1119 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 TCP11L1Q9NUJ3 509 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 CTNNA3Q9UI47 895 aa14.85□□□□□ -0.03
LRRC28-214ENST00000559433 ALPK3Q96L96 1907 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 EVI5O60447 810 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 TOP1P11387 765 aaKnown RBP14.84□□□□□ -0.03
LRRC28-214ENST00000559433 CHMLP26374 656 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 IMMTQ16891 758 aaKnown RBP14.84□□□□□ -0.03
LRRC28-214ENST00000559433 CCDC96Q2M329 555 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 OLFML2BQ68BL8 750 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 KCTD1Q719H9 257 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 RASGRP2Q7LDG7 609 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 FAM160B2Q86V87 743 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 CHURC1Q8WUH1 139 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 ESR2Q92731 530 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 PAWRQ96IZ0 340 aaKnown RBP14.84□□□□□ -0.03
LRRC28-214ENST00000559433 TMEM47Q9BQJ4 181 aa14.84□□□□□ -0.03
LRRC28-214ENST00000559433 RAVER2Q9HCJ3 691 aaKnown RBP14.84□□□□□ -0.03
LRRC28-214ENST00000559433 ATP2A1O14983 1001 aa14.83□□□□□ -0.04
LRRC28-214ENST00000559433 PGK2P07205 417 aa14.83□□□□□ -0.04
LRRC28-214ENST00000559433 RCSD1Q6JBY9 416 aa14.83□□□□□ -0.04
LRRC28-214ENST00000559433 CENPQQ7L2Z9 268 aaPredicted RBP14.83□□□□□ -0.04
LRRC28-214ENST00000559433 DIS3LQ8TF46 1054 aaKnown RBP14.83□□□□□ -0.04
LRRC28-214ENST00000559433 DCAF4Q8WV16 495 aa14.83□□□□□ -0.04
LRRC28-214ENST00000559433 RIPK3Q9Y572 518 aa14.83□□□□□ -0.04
LRRC28-214ENST00000559433 H0YGN5 161 aa14.82□□□□□ -0.04
LRRC28-214ENST00000559433 MSCO60682 206 aa14.82□□□□□ -0.04
LRRC28-214ENST00000559433 KDM4AO75164 1064 aa14.82□□□□□ -0.04
LRRC28-214ENST00000559433 FDX1P10109 184 aa14.82□□□□□ -0.04
LRRC28-214ENST00000559433 OAZ1P54368 228 aa14.82□□□□□ -0.04
LRRC28-214ENST00000559433 DDX11Q96FC9 970 aa14.82□□□□□ -0.04
LRRC28-214ENST00000559433 MAML3Q96JK9 1138 aa14.82□□□□□ -0.04
LRRC28-214ENST00000559433 ZKSCAN3Q9BRR0 538 aa14.82□□□□□ -0.04
LRRC28-214ENST00000559433 OGDHLQ9ULD0 1010 aa14.82□□□□□ -0.04
LRRC28-214ENST00000559433 B4E1Z4 1266 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 PLA2G6O60733 806 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 IGHA2P01877 340 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 CYBAP13498 195 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 NT5C2P49902 561 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 LHX8Q68G74 356 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 IQCA1Q86XH1 822 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 TRPV1Q8NER1 839 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 TTC14Q96N46 770 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 C11orf49Q9H6J7 331 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 HOMER2Q9NSB8 354 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 DDX20Q9UHI6 824 aaKnown RBP14.81□□□□□ -0.04
LRRC28-214ENST00000559433 CEP290O15078 2479 aa14.81□□□□□ -0.04
LRRC28-214ENST00000559433 MCM3APO60318 1980 aa14.8□□□□□ -0.04
LRRC28-214ENST00000559433 SNAP25P60880 206 aa14.8□□□□□ -0.04
LRRC28-214ENST00000559433 ZNF792Q3KQV3 632 aa14.8□□□□□ -0.04
LRRC28-214ENST00000559433 CCDC178Q5BJE1 867 aa14.8□□□□□ -0.04
LRRC28-214ENST00000559433 CCDC174Q6PII3 467 aa14.8□□□□□ -0.04
LRRC28-214ENST00000559433 CHST13Q8NET6 341 aa14.8□□□□□ -0.04
LRRC28-214ENST00000559433 KRT23Q9C075 422 aa14.8□□□□□ -0.04
LRRC28-214ENST00000559433 CNNM2Q9H8M5 875 aa14.8□□□□□ -0.04
LRRC28-214ENST00000559433 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
LRRC28-214ENST00000559433 FBXO40Q9UH90 709 aa14.8□□□□□ -0.04
LRRC28-214ENST00000559433 PRR12Q9ULL5 1215 aa14.8□□□□□ -0.04
LRRC28-214ENST00000559433 DIS3Q9Y2L1 958 aaKnown RBP14.8□□□□□ -0.04
LRRC28-214ENST00000559433 FRMPD2Q68DX3 1309 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms