RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 NPLOC4Q8TAT6 608 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 STAG1Q8WVM7 1258 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 ESR2Q92731 530 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 ZKSCAN3Q9BRR0 538 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 DSCC1Q9BVC3 393 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 TEX13BQ9BXU2 312 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 RAVER2Q9HCJ3 691 aaKnown RBP9.66□□□□□ -0.86
SNX1-207ENST00000559401 PAK6Q9NQU5 681 aaPredicted RBP9.66□□□□□ -0.86
SNX1-207ENST00000559401 IL17RBQ9NRM6 502 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 CTNNA3Q9UI47 895 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 ZNF214Q9UL59 606 aaPredicted RBP9.66□□□□□ -0.86
SNX1-207ENST00000559401 KDM4AO75164 1064 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 PGK2P07205 417 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 HOXC6P09630 235 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 FGRP09769 529 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 TOP1P11387 765 aaKnown RBP9.65□□□□□ -0.86
SNX1-207ENST00000559401 PCP11498 1178 aaKnown RBP9.65□□□□□ -0.86
SNX1-207ENST00000559401 CHMLP26374 656 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 CCND3P30281 292 aaPredicted RBP9.65□□□□□ -0.86
SNX1-207ENST00000559401 CYP2C19P33261 490 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 PRPF38BQ5VTL8 546 aaKnown RBP9.65□□□□□ -0.86
SNX1-207ENST00000559401 RASGRP2Q7LDG7 609 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 FAM160B2Q86V87 743 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 REPS2Q8NFH8 660 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 CHURC1Q8WUH1 139 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 DPF3Q92784 378 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 DDX11Q96FC9 970 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 GMCL1Q96IK5 515 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 HTATIP2Q9BUP3 242 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 IL25Q9H293 177 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 HOMER2Q9NSB8 354 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 FLRT1Q9NZU1 646 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 ADAMTS5Q9UNA0 930 aa9.65□□□□□ -0.86
SNX1-207ENST00000559401 FRMPD2Q68DX3 1309 aaPredicted RBP9.64□□□□□ -0.87
SNX1-207ENST00000559401 B4E1Z4 1266 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 COBLO75128 1261 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 MAP3K21Q5TCX8 1036 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 RCSD1Q6JBY9 416 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 CCDC174Q6PII3 467 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 IQCA1Q86XH1 822 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 ABRAQ8N0Z2 381 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 DCAF4Q8WV16 495 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 CCDC136Q96JN2 1154 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 TMEM47Q9BQJ4 181 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 SLC38A10Q9HBR0 1119 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 GPCPD1Q9NPB8 672 aa9.64□□□□□ -0.87
SNX1-207ENST00000559401 TNRC18O15417 2968 aaPredicted RBP9.64□□□□□ -0.87
SNX1-207ENST00000559401 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
SNX1-207ENST00000559401 FDX1P10109 184 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 ALAS1P13196 640 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 CAPN2P17655 700 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 SLC16A2P36021 539 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 OAZ1P54368 228 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 SNAP25P60880 206 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 TRDNQ13061 729 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 NECAB2Q7Z6G3 386 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 SKAP1Q86WV1 359 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 ANKRD35Q8N283 1001 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 DIS3LQ8TF46 1054 aaKnown RBP9.63□□□□□ -0.87
SNX1-207ENST00000559401 PAWRQ96IZ0 340 aaKnown RBP9.63□□□□□ -0.87
SNX1-207ENST00000559401 MAML3Q96JK9 1138 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 UBAC1Q9BSL1 405 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 KRT23Q9C075 422 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 CRISPLD2Q9H0B8 497 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 KAT14Q9H8E8 782 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 CNNM2Q9H8M5 875 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 TCP11L1Q9NUJ3 509 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 FBXO40Q9UH90 709 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 PRR12Q9ULL5 1215 aa9.63□□□□□ -0.87
SNX1-207ENST00000559401 TNKSO95271 1327 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 ATP2A1O14983 1001 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 SGSM2O43147 1006 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 PTH1RQ03431 593 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 CCDC178Q5BJE1 867 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 OLFML2BQ68BL8 750 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 TTBK2Q6IQ55 1244 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 KIAA1211Q6ZU35 1233 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 ANKLE1Q8NAG6 615 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 CHST13Q8NET6 341 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 AGBL1Q96MI9 1066 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 TTC14Q96N46 770 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 ACAD9Q9H845 621 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 RNF146Q9NTX7 359 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 DDX20Q9UHI6 824 aaKnown RBP9.62□□□□□ -0.87
SNX1-207ENST00000559401 RIPK3Q9Y572 518 aa9.62□□□□□ -0.87
SNX1-207ENST00000559401 U3KPZ7 1027 aaPredicted RBP9.62□□□□□ -0.87
SNX1-207ENST00000559401 MYH6P13533 1939 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 ALPK3Q96L96 1907 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 DHX16O60231 1041 aaKnown RBP9.61□□□□□ -0.87
SNX1-207ENST00000559401 MSCO60682 206 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 PDHBP11177 359 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 CYBAP13498 195 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 NOVP48745 357 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 NT5C2P49902 561 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 PRAMEF19Q5SWL8 479 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 SYDE2Q5VT97 1194 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 ANO1Q5XXA6 986 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 RALYLQ86SE5 291 aaKnown RBP9.61□□□□□ -0.87
SNX1-207ENST00000559401 DGKHQ86XP1 1220 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms