RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 TYW1BQ6NUM6 668 aa18.69■□□□□ 0.58
SPG11-215ENST00000559193 ADSSL1Q8N142 457 aa18.69■□□□□ 0.58
SPG11-215ENST00000559193 NAPGQ99747 312 aaPredicted RBP18.69■□□□□ 0.58
SPG11-215ENST00000559193 SLF1Q9BQI6 1058 aa18.69■□□□□ 0.58
SPG11-215ENST00000559193 RAB21Q9UL25 225 aa18.69■□□□□ 0.58
SPG11-215ENST00000559193 PCDHA4Q9UN74 947 aa18.69■□□□□ 0.58
SPG11-215ENST00000559193 MAP2K7O14733 419 aa18.69■□□□□ 0.58
SPG11-215ENST00000559193 UBXN1Q04323 297 aa18.69■□□□□ 0.58
SPG11-215ENST00000559193 BICDL1Q6ZP65 573 aa18.69■□□□□ 0.58
SPG11-215ENST00000559193 STAG2Q8N3U4 1231 aa18.69■□□□□ 0.58
SPG11-215ENST00000559193 PP2D1A8MPX8 630 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 M0R2N6 131 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 PARP1P09874 1014 aaKnown RBP18.68■□□□□ 0.58
SPG11-215ENST00000559193 HIBADHP31937 336 aaKnown RBP18.68■□□□□ 0.58
SPG11-215ENST00000559193 ST5P78524 1137 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 WWC2Q6AWC2 1192 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 LINC00116Q8NCU8 138 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 HNRNPLLQ8WVV9 542 aaKnown RBP18.68■□□□□ 0.58
SPG11-215ENST00000559193 KAT14Q9H8E8 782 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 SH3GLB2Q9NR46 395 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 IL17RBQ9NRM6 502 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 REXO2Q9Y3B8 237 aaKnown RBP18.68■□□□□ 0.58
SPG11-215ENST00000559193 H7C1D1 291 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 KCNQ2O43526 872 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 USP17L8P0C7I0 530 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 USP5P45974 858 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 PMS1P54277 932 aaKnown RBP18.68■□□□□ 0.58
SPG11-215ENST00000559193 CHP1Q99653 195 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 MCM9Q9NXL9 1143 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 MYO1AQ9UBC5 1043 aa18.68■□□□□ 0.58
SPG11-215ENST00000559193 H3BQF6 201 aa18.67■□□□□ 0.58
SPG11-215ENST00000559193 POTEB2H3BUK9 544 aa18.67■□□□□ 0.58
SPG11-215ENST00000559193 SLC35G1Q2M3R5 365 aa18.67■□□□□ 0.58
SPG11-215ENST00000559193 SLC10A5Q5PT55 438 aa18.67■□□□□ 0.58
SPG11-215ENST00000559193 BEND6Q5SZJ8 279 aaPredicted RBP18.67■□□□□ 0.58
SPG11-215ENST00000559193 TMEM60Q9H2L4 133 aa18.67■□□□□ 0.58
SPG11-215ENST00000559193 JAG2Q9Y219 1238 aa18.67■□□□□ 0.58
SPG11-215ENST00000559193 THRAP3Q9Y2W1 955 aaKnown RBP18.67■□□□□ 0.58
SPG11-215ENST00000559193 NRAPQ86VF7 1730 aa18.67■□□□□ 0.58
SPG11-215ENST00000559193 TFAP4Q01664 338 aa18.67■□□□□ 0.58
SPG11-215ENST00000559193 TBC1D9BQ66K14 1250 aa18.67■□□□□ 0.58
SPG11-215ENST00000559193 PNMA1Q8ND90 353 aa18.67■□□□□ 0.58
SPG11-215ENST00000559193 TTC26A0AVF1 554 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 LGALS16A8MUM7 142 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 KLRC4O43908 158 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 GTF2E1P29083 439 aaPredicted RBP18.66■□□□□ 0.58
SPG11-215ENST00000559193 RPS8P62241 208 aaKnown RBP18.66■□□□□ 0.58
SPG11-215ENST00000559193 AMPD2Q01433 879 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 WHAMMP3Q1A5X7 153 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 SMIM5Q71RC9 77 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 MB21D1Q8N884 522 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 NEK11Q8NG66 645 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 TRIM10Q9UDY6 481 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 PCDHA6Q9UN73 950 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 PCDHA8Q9Y5H6 950 aa18.66■□□□□ 0.58
SPG11-215ENST00000559193 NDUFA10O95299 355 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 KCNB1Q14721 858 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 GRM4Q14833 912 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 DTHD1Q6ZMT9 781 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 TXNRD3Q86VQ6 643 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 DGKHQ86XP1 1220 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 LRRC15Q8TF66 581 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
SPG11-215ENST00000559193 MAD2L2Q9UI95 211 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 EPN1Q9Y6I3 576 aaPredicted RBP18.65■□□□□ 0.58
SPG11-215ENST00000559193 CCDC194A0A1B0GVG4 234 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 C12orf60Q5U649 245 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 ZNF507Q8TCN5 953 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 DYNLL2Q96FJ2 89 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 CALCOCO1Q9P1Z2 691 aa18.65■□□□□ 0.58
SPG11-215ENST00000559193 MKRN1Q9UHC7 482 aaKnown RBP18.65■□□□□ 0.58
SPG11-215ENST00000559193 A0A1W2PQC6 194 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 CTAGE15A4D2H0 777 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 RHOXF2BP0C7M4 288 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 CTAGE8P0CG41 777 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 KCNQ4P56696 695 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 INF2Q27J81 1249 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 CTAGE6Q86UF2 777 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 CTAGE4Q8IX94 777 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 ANKS1AQ92625 1134 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 DNAJC7Q99615 494 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 RHOXF2Q9BQY4 288 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 EEF1GP26641 437 aaKnown RBP18.64■□□□□ 0.57
SPG11-215ENST00000559193 TUBB4BP68371 445 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 DAGLBQ8NCG7 672 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 OR8K1Q8NGG5 319 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 RASSF8Q8NHQ8 419 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 PLIN2Q99541 437 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 THAP9Q9H5L6 903 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 ABCB6Q9NP58 842 aa18.64■□□□□ 0.57
SPG11-215ENST00000559193 CYTH3O43739 400 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 RHOBTB3O94955 611 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 GYS2P54840 703 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 VSNL1P62760 191 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 PIP4K2BP78356 416 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 DZIP1Q86YF9 867 aaKnown RBP18.63■□□□□ 0.57
SPG11-215ENST00000559193 NOA1Q8NC60 698 aaKnown RBP18.63■□□□□ 0.57
SPG11-215ENST00000559193 ANKRD2Q9GZV1 360 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 KBTBD4Q9NVX7 518 aa18.63■□□□□ 0.57
SPG11-215ENST00000559193 MYO6Q9UM54 1294 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms