RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 NBPF11Q86T75 865 aa18.33■□□□□ 0.52
CDC42BPB-204ENST00000559043 CMTR1Q8N1G2 835 aaKnown RBP18.33■□□□□ 0.52
CDC42BPB-204ENST00000559043 FRMPD2Q68DX3 1309 aaPredicted RBP18.33■□□□□ 0.52
CDC42BPB-204ENST00000559043 A0A0G2JLL6 359 aaPredicted RBP18.32■□□□□ 0.52
CDC42BPB-204ENST00000559043 DDAH1O94760 285 aa18.32■□□□□ 0.52
CDC42BPB-204ENST00000559043 HS1BP3Q53T59 392 aa18.32■□□□□ 0.52
CDC42BPB-204ENST00000559043 PRRT2Q7Z6L0 340 aaPredicted RBP18.32■□□□□ 0.52
CDC42BPB-204ENST00000559043 FERMT3Q86UX7 667 aa18.32■□□□□ 0.52
CDC42BPB-204ENST00000559043 ZIC5Q96T25 663 aa18.32■□□□□ 0.52
CDC42BPB-204ENST00000559043 CREBZFQ9NS37 354 aa18.32■□□□□ 0.52
CDC42BPB-204ENST00000559043 PALM3A6NDB9 673 aaPredicted RBP18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 C19orf81C9J6K1 198 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 GRM4Q14833 912 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 GMCL1Q96IK5 515 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 GOPCQ9HD26 462 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 MYH15Q9Y2K3 1946 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 PPFIA3O75145 1194 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 VCAM1P19320 739 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 ZNF543Q08ER8 600 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 FAM83BQ5T0W9 1011 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 TREML2Q5T2D2 321 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 CYP4F22Q6NT55 531 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 SYNE3Q6ZMZ3 975 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 FAM184AQ8NB25 1140 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 NSUN7Q8NE18 718 aaKnown RBP18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 C12orf42Q96LP6 360 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 SCAND2PQ9GZW5 306 aaPredicted RBP18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 SH2D4AQ9H788 454 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 GPCPD1Q9NPB8 672 aa18.31■□□□□ 0.52
CDC42BPB-204ENST00000559043 GOLGA8AA7E2F4 631 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 PLEKHA8P1O95397 391 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 CTDNEP1O95476 244 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 SLC10A3P09131 477 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 SLC1A4P43007 532 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 RESTQ13127 1097 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 HHIPL1Q96JK4 782 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 UBA5Q9GZZ9 404 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 BAZ2BQ9UIF8 2168 aaKnown RBP18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 ZBTB48P10074 688 aaPredicted RBP18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 SLC16A2P36021 539 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 USP14P54578 494 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 HMGN5P82970 282 aaKnown RBP18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 FUT2Q10981 343 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 NTRK3Q16288 839 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 GPAT2Q6NUI2 795 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 FAM173BQ6P4H8 233 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 SRBD1Q8N5C6 995 aaKnown RBP18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 DCAF4Q8WV16 495 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 BRI3BPQ8WY22 251 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 MAP3K14Q99558 947 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 ZSCAN16Q9H4T2 348 aaPredicted RBP18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 FBXO28Q9NVF7 368 aa18.3■□□□□ 0.52
CDC42BPB-204ENST00000559043 RASSF10A6NK89 507 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 CYTH3O43739 400 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 PARP1P09874 1014 aaKnown RBP18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 BMP3P12645 472 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 RCAN1P53805 252 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 SNAPC2Q13487 334 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 RTN1Q16799 776 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 CCDC82Q8N4S0 544 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 RNF214Q8ND24 703 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 LPAR1Q92633 364 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 PTPN18Q99952 460 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 NID2Q14112 1375 aa18.29■□□□□ 0.52
CDC42BPB-204ENST00000559043 KLRF2D3W0D1 207 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 CALM1P0DP23 149 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 CALM2P0DP24 149 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 CALM3P0DP25 149 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 UVSSAQ2YD98 709 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 DEFB115Q30KQ5 88 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 FUCA2Q9BTY2 467 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 RPAP3Q9H6T3 665 aaPredicted RBP18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 TMEM232C9JQI7 657 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 CCDC96Q2M329 555 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 CTCFLQ8NI51 663 aaPredicted RBP18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 TMOD4Q9NZQ9 345 aa18.28■□□□□ 0.52
CDC42BPB-204ENST00000559043 PTPDC1A2A3K4 754 aa18.27■□□□□ 0.52
CDC42BPB-204ENST00000559043 WDR46O15213 610 aaKnown RBP18.27■□□□□ 0.52
CDC42BPB-204ENST00000559043 GRM1Q13255 1194 aa18.27■□□□□ 0.52
CDC42BPB-204ENST00000559043 POTEEQ6S8J3 1075 aa18.27■□□□□ 0.52
CDC42BPB-204ENST00000559043 TMTC3Q6ZXV5 915 aa18.27■□□□□ 0.52
CDC42BPB-204ENST00000559043 ZSCAN30Q86W11 494 aa18.27■□□□□ 0.52
CDC42BPB-204ENST00000559043 LEO1Q8WVC0 666 aaPredicted RBP18.27■□□□□ 0.52
CDC42BPB-204ENST00000559043 CCDC102AQ96A19 550 aa18.27■□□□□ 0.52
CDC42BPB-204ENST00000559043 KIF3AQ9Y496 699 aa18.27■□□□□ 0.52
CDC42BPB-204ENST00000559043 H3BQV1 296 aa18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 GTF2A2P52657 109 aa18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 C1QTNF8P60827 252 aa18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 ASPRV1Q53RT3 343 aa18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 PROCA1Q8NCQ7 364 aaPredicted RBP18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 PCNTO95613 3336 aa18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 CCL15-CCL14A0A0B4J2E2 113 aa18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 hCG_1642624A0A1W2PR95 340 aa18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 CCL15Q16663 113 aa18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 GPATCH4Q5T3I0 446 aaKnown RBP18.26■□□□□ 0.51
CDC42BPB-204ENST00000559043 CATSPERGQ6ZRH7 1159 aa18.26■□□□□ 0.51
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