RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 SLC1A4P43007 532 aa12.94□□□□□ -0.34
HMG20A-206ENST00000558845 IREB2P48200 963 aaKnown RBP12.94□□□□□ -0.34
HMG20A-206ENST00000558845 USP14P54578 494 aa12.94□□□□□ -0.34
HMG20A-206ENST00000558845 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
HMG20A-206ENST00000558845 ATP2B2Q01814 1243 aa12.94□□□□□ -0.34
HMG20A-206ENST00000558845 EAPPQ56P03 285 aaPredicted RBP12.94□□□□□ -0.34
HMG20A-206ENST00000558845 PRAMEF18Q5VWM3 479 aa12.94□□□□□ -0.34
HMG20A-206ENST00000558845 ACER1Q8TDN7 264 aa12.94□□□□□ -0.34
HMG20A-206ENST00000558845 C12orf42Q96LP6 360 aa12.94□□□□□ -0.34
HMG20A-206ENST00000558845 GBP4Q96PP9 640 aa12.94□□□□□ -0.34
HMG20A-206ENST00000558845 PICK1Q9NRD5 415 aa12.94□□□□□ -0.34
HMG20A-206ENST00000558845 VPS37CA5D8V6 355 aaPredicted RBP12.93□□□□□ -0.34
HMG20A-206ENST00000558845 C19orf81C9J6K1 198 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 BMP3P12645 472 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 ECE1P42892 770 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 FKBP1BP68106 108 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 RESTQ13127 1097 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 TRIM29Q14134 588 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 KRT40Q6A162 431 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 ATL3Q6DD88 541 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 GALNT17Q6IS24 598 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.93□□□□□ -0.34
HMG20A-206ENST00000558845 BRAPQ7Z569 592 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 TEX2Q8IWB9 1127 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 CMTR1Q8N1G2 835 aaKnown RBP12.93□□□□□ -0.34
HMG20A-206ENST00000558845 RRP36Q96EU6 259 aaKnown RBP12.93□□□□□ -0.34
HMG20A-206ENST00000558845 RRAGCQ9HB90 399 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 MYH6P13533 1939 aa12.93□□□□□ -0.34
HMG20A-206ENST00000558845 PHIPQ8WWQ0 1821 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 ESYT2A0FGR8 921 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 USP17L10C9JJH3 530 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 WDR46O15213 610 aaKnown RBP12.92□□□□□ -0.34
HMG20A-206ENST00000558845 DTNBO60941 627 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 MMP1P03956 469 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 GOLGA8HP0CJ92 632 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 U2AF2P26368 475 aaKnown RBP eCLIP12.92□□□□□ -0.34
HMG20A-206ENST00000558845 BACE1P56817 501 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 CCDC96Q2M329 555 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 SH3D19Q5HYK7 790 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 RASGRP2Q7LDG7 609 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 ARMC9Q7Z3E5 817 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 FAM160B2Q86V87 743 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 ANKRD13AQ8IZ07 590 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 ZNF280CQ8ND82 737 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 CCDC148Q8NFR7 591 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
HMG20A-206ENST00000558845 AIFM3Q96NN9 605 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 PHF20Q9BVI0 1012 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 GLIS2Q9BZE0 524 aaPredicted RBP12.92□□□□□ -0.34
HMG20A-206ENST00000558845 FOXP1Q9H334 677 aaPredicted RBP12.92□□□□□ -0.34
HMG20A-206ENST00000558845 BARHL2Q9NY43 387 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 PCDHB8Q9UN66 801 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 CSADQ9Y600 493 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 SNCAIPQ9Y6H5 919 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 OTOFQ9HC10 1997 aa12.92□□□□□ -0.34
HMG20A-206ENST00000558845 FRMPD2Q68DX3 1309 aaPredicted RBP12.91□□□□□ -0.34
HMG20A-206ENST00000558845 PNMA6FA0A0J9YX94 578 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 BAG4O95429 457 aaKnown RBP12.91□□□□□ -0.34
HMG20A-206ENST00000558845 CALML3P27482 149 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 KIF23Q02241 960 aaPredicted RBP12.91□□□□□ -0.34
HMG20A-206ENST00000558845 VGLL4Q14135 290 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 LDLRAD1Q5T700 205 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 PPP1R18Q6NYC8 613 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 KCTD1Q719H9 257 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 ADGRF4Q8IZF3 695 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 DAGLBQ8NCG7 672 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 CCDC12Q8WUD4 166 aaPredicted RBP12.91□□□□□ -0.34
HMG20A-206ENST00000558845 CHURC1Q8WUH1 139 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 ZKSCAN4Q969J2 545 aaPredicted RBP12.91□□□□□ -0.34
HMG20A-206ENST00000558845 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 SEC63Q9UGP8 760 aaKnown RBP12.91□□□□□ -0.34
HMG20A-206ENST00000558845 FEM1BQ9UK73 627 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 AFG3L2Q9Y4W6 797 aa12.91□□□□□ -0.34
HMG20A-206ENST00000558845 SPDYE5A6NIY4 337 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 UBE2Q2LH0YL09 131 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 ZBTB5O15062 677 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 PTMSP20962 102 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 STAT2P52630 851 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 PPATQ06203 517 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 TRAF1Q13077 416 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 SAFBQ15424 915 aaKnown RBP eCLIP12.9□□□□□ -0.34
HMG20A-206ENST00000558845 NPY5RQ15761 445 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 KIAA1755Q5JYT7 1200 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 SYDE2Q5VT97 1194 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 TTBK2Q6IQ55 1244 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 ERO1BQ86YB8 467 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 SHISA4Q96DD7 197 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 FEZ1Q99689 392 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 UBA5Q9GZZ9 404 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 GPCPD1Q9NPB8 672 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.9□□□□□ -0.34
HMG20A-206ENST00000558845 MTMR7Q9Y216 660 aa12.9□□□□□ -0.34
HMG20A-206ENST00000558845 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
HMG20A-206ENST00000558845 STXBP3O00186 592 aa12.89□□□□□ -0.35
HMG20A-206ENST00000558845 FDX1P10109 184 aa12.89□□□□□ -0.35
HMG20A-206ENST00000558845 MCM4P33991 863 aa12.89□□□□□ -0.35
HMG20A-206ENST00000558845 SPP2Q13103 211 aa12.89□□□□□ -0.35
HMG20A-206ENST00000558845 MAP1SQ66K74 1059 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms