RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 RGS20O76081 388 aa11.94□□□□□ -0.5
SPG11-212ENST00000558790 NR3C2P08235 984 aa11.94□□□□□ -0.5
SPG11-212ENST00000558790 RFX1P22670 979 aa11.94□□□□□ -0.5
SPG11-212ENST00000558790 MAGEA10P43363 369 aaPredicted RBP11.94□□□□□ -0.5
SPG11-212ENST00000558790 DEPDC4Q8N2C3 294 aa11.94□□□□□ -0.5
SPG11-212ENST00000558790 DIS3LQ8TF46 1054 aaKnown RBP11.94□□□□□ -0.5
SPG11-212ENST00000558790 DEFB118Q96PH6 123 aa11.94□□□□□ -0.5
SPG11-212ENST00000558790 MEIS3Q99687 375 aa11.94□□□□□ -0.5
SPG11-212ENST00000558790 COPRSQ9NQ92 184 aa11.94□□□□□ -0.5
SPG11-212ENST00000558790 A0A1B0GUL7 405 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 ATP9BO43861 1147 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 RHBDL3P58872 404 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 MECOMQ03112 1051 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 FAM110CQ1W6H9 321 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 PI16Q6UXB8 463 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 TDHQ8IZJ6 230 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 FAM122AQ96E09 287 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 TOR4AQ9NXH8 423 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.93□□□□□ -0.5
SPG11-212ENST00000558790 WASF2Q9Y6W5 498 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 MYH8P13535 1937 aa11.93□□□□□ -0.5
SPG11-212ENST00000558790 GPR75-ASB3A0A0A6YYF3 556 aa11.92□□□□□ -0.5
SPG11-212ENST00000558790 TIMM10P62072 90 aa11.92□□□□□ -0.5
SPG11-212ENST00000558790 PLPP7Q8NBV4 271 aa11.92□□□□□ -0.5
SPG11-212ENST00000558790 XAGE2Q96GT9 111 aa11.92□□□□□ -0.5
SPG11-212ENST00000558790 PAWRQ96IZ0 340 aaKnown RBP11.92□□□□□ -0.5
SPG11-212ENST00000558790 NOB1Q9ULX3 412 aaKnown RBP11.92□□□□□ -0.5
SPG11-212ENST00000558790 PCDHB11Q9Y5F2 797 aa11.92□□□□□ -0.5
SPG11-212ENST00000558790 NAV1Q8NEY1 1877 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 ERVH48-1M5A8F1 160 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 TFRCP02786 760 aaKnown RBP11.91□□□□□ -0.5
SPG11-212ENST00000558790 HMGCS2P54868 508 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 PRR20EP86478 221 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 PRR20CP86479 221 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 PRR20DP86480 221 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 PRR20BP86481 221 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 PRR20AP86496 221 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 TFCP2Q12800 502 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 MVPQ14764 893 aaKnown RBP11.91□□□□□ -0.5
SPG11-212ENST00000558790 SPTY2D1Q68D10 685 aaPredicted RBP11.91□□□□□ -0.5
SPG11-212ENST00000558790 COA7Q96BR5 231 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPG11-212ENST00000558790 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPG11-212ENST00000558790 TMPRSS4Q9NRS4 437 aa11.91□□□□□ -0.5
SPG11-212ENST00000558790 MAFBQ9Y5Q3 323 aaPredicted RBP11.91□□□□□ -0.5
SPG11-212ENST00000558790 USP17L5A8MUK1 530 aa11.9□□□□□ -0.5
SPG11-212ENST00000558790 SRGAP3O43295 1099 aa11.9□□□□□ -0.5
SPG11-212ENST00000558790 HMGCRP04035 888 aa11.9□□□□□ -0.5
SPG11-212ENST00000558790 SPP2Q13103 211 aa11.9□□□□□ -0.5
SPG11-212ENST00000558790 NNTQ13423 1086 aa11.9□□□□□ -0.5
SPG11-212ENST00000558790 RRP1BQ14684 758 aaKnown RBP11.9□□□□□ -0.5
SPG11-212ENST00000558790 RNF20Q5VTR2 975 aa11.9□□□□□ -0.5
SPG11-212ENST00000558790 ZNF280CQ8ND82 737 aa11.9□□□□□ -0.5
SPG11-212ENST00000558790 NSUN4Q96CB9 384 aaKnown RBP11.9□□□□□ -0.5
SPG11-212ENST00000558790 API5Q9BZZ5 524 aaKnown RBP11.9□□□□□ -0.5
SPG11-212ENST00000558790 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
SPG11-212ENST00000558790 HMG20BQ9P0W2 317 aa11.9□□□□□ -0.5
SPG11-212ENST00000558790 DOLKQ9UPQ8 538 aa11.9□□□□□ -0.5
SPG11-212ENST00000558790 LTBP2Q14767 1821 aa11.89□□□□□ -0.51
SPG11-212ENST00000558790 SMPD1P17405 629 aa11.89□□□□□ -0.51
SPG11-212ENST00000558790 OXLD1Q5BKU9 147 aa11.89□□□□□ -0.51
SPG11-212ENST00000558790 CCDC116Q8IYX3 515 aa11.89□□□□□ -0.51
SPG11-212ENST00000558790 TRMT2AQ8IZ69 625 aaKnown RBP11.89□□□□□ -0.51
SPG11-212ENST00000558790 SPATA5Q8NB90 893 aa11.89□□□□□ -0.51
SPG11-212ENST00000558790 MAFAQ8NHW3 353 aaPredicted RBP11.89□□□□□ -0.51
SPG11-212ENST00000558790 ASCC2Q9H1I8 757 aaPredicted RBP11.89□□□□□ -0.51
SPG11-212ENST00000558790 HDAC5Q9UQL6 1122 aa11.89□□□□□ -0.51
SPG11-212ENST00000558790 AKAP2Q9Y2D5 859 aa11.89□□□□□ -0.51
SPG11-212ENST00000558790 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 TMEM265A0A087WTH1 108 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 CT47B1P0C2W7 299 aaPredicted RBP11.88□□□□□ -0.51
SPG11-212ENST00000558790 ARID4AP29374 1257 aaPredicted RBP11.88□□□□□ -0.51
SPG11-212ENST00000558790 CAP2P40123 477 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 MCAMP43121 646 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 GCLCP48506 637 aaPredicted RBP11.88□□□□□ -0.51
SPG11-212ENST00000558790 GSTO1P78417 241 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 NR5A1Q13285 461 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 MTX1Q13505 466 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 NCOA4Q13772 614 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 TRAF7Q6Q0C0 670 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 USP17L2Q6R6M4 530 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 NECAB2Q7Z6G3 386 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 CDX2Q99626 313 aaPredicted RBP11.88□□□□□ -0.51
SPG11-212ENST00000558790 UBE2OQ9C0C9 1292 aaKnown RBP11.88□□□□□ -0.51
SPG11-212ENST00000558790 PARP14Q460N5 1801 aa11.88□□□□□ -0.51
SPG11-212ENST00000558790 XIRP2A4UGR9 3374 aa11.87□□□□□ -0.51
SPG11-212ENST00000558790 CAPN2P17655 700 aa11.87□□□□□ -0.51
SPG11-212ENST00000558790 PABPC4Q13310 644 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPG11-212ENST00000558790 SHROOM1Q2M3G4 852 aaPredicted RBP11.87□□□□□ -0.51
SPG11-212ENST00000558790 PPP1R26Q5T8A7 1209 aaPredicted RBP11.87□□□□□ -0.51
SPG11-212ENST00000558790 TEX11Q8IYF3 940 aa11.87□□□□□ -0.51
SPG11-212ENST00000558790 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
SPG11-212ENST00000558790 TRIB2Q92519 343 aa11.87□□□□□ -0.51
SPG11-212ENST00000558790 NEUROD6Q96NK8 337 aa11.87□□□□□ -0.51
SPG11-212ENST00000558790 RAI14Q9P0K7 980 aa11.87□□□□□ -0.51
SPG11-212ENST00000558790 GJD2Q9UKL4 321 aa11.87□□□□□ -0.51
SPG11-212ENST00000558790 A0A0G2JMZ2 1700 aa11.86□□□□□ -0.51
SPG11-212ENST00000558790 RLFQ13129 1914 aa11.86□□□□□ -0.51
SPG11-212ENST00000558790 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.86□□□□□ -0.51
SPG11-212ENST00000558790 PEX10O60683 326 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms