RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 SEC24BO95487 1268 aa18.27■□□□□ 0.52
LINC01220-201ENST00000558575 VCAM1P19320 739 aa18.27■□□□□ 0.52
LINC01220-201ENST00000558575 POTEEQ6S8J3 1075 aa18.27■□□□□ 0.52
LINC01220-201ENST00000558575 SYMPKQ92797 1274 aaKnown RBP18.27■□□□□ 0.52
LINC01220-201ENST00000558575 KRT23Q9C075 422 aa18.27■□□□□ 0.52
LINC01220-201ENST00000558575 F5H6K3 240 aa18.26■□□□□ 0.51
LINC01220-201ENST00000558575 REC8O95072 547 aa18.26■□□□□ 0.51
LINC01220-201ENST00000558575 HSPA4P34932 840 aa18.26■□□□□ 0.51
LINC01220-201ENST00000558575 KLRC3Q07444 240 aa18.26■□□□□ 0.51
LINC01220-201ENST00000558575 TSGA10IPQ3SY00 556 aa18.26■□□□□ 0.51
LINC01220-201ENST00000558575 LHX8Q68G74 356 aa18.26■□□□□ 0.51
LINC01220-201ENST00000558575 MB21D2Q8IYB1 491 aaPredicted RBP18.26■□□□□ 0.51
LINC01220-201ENST00000558575 SPICE1Q8N0Z3 855 aa18.26■□□□□ 0.51
LINC01220-201ENST00000558575 LRRC47Q8N1G4 583 aaKnown RBP18.26■□□□□ 0.51
LINC01220-201ENST00000558575 P2RX7Q99572 595 aaKnown RBP18.26■□□□□ 0.51
LINC01220-201ENST00000558575 ASCC2Q9H1I8 757 aaPredicted RBP18.26■□□□□ 0.51
LINC01220-201ENST00000558575 CNNM2Q9H8M5 875 aa18.26■□□□□ 0.51
LINC01220-201ENST00000558575 LAMA4Q16363 1823 aa18.26■□□□□ 0.51
LINC01220-201ENST00000558575 NDUFB10O96000 172 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 CYP2B6P20813 491 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 NT5C2P49902 561 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 ANTXR2P58335 489 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 C8orf34Q49A92 452 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 CATSPERGQ6ZRH7 1159 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 ANKS1AQ92625 1134 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 TTC14Q96N46 770 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 TMEM47Q9BQJ4 181 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 RPAP3Q9H6T3 665 aaPredicted RBP18.25■□□□□ 0.51
LINC01220-201ENST00000558575 SH2D4AQ9H788 454 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 PNMA3Q9UL41 463 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 STX8Q9UNK0 236 aa18.25■□□□□ 0.51
LINC01220-201ENST00000558575 MYO9BQ13459 2157 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 USP17L15C9J2P7 530 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 USP17L13C9JLJ4 530 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 USP17L11C9JVI0 530 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 USP17L18D6R9N7 530 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 USP17L22D6RA61 530 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 USP17L17D6RBQ6 530 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 USP17L19D6RCP7 530 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 USP17L20D6RJB6 530 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 TNFRSF10AO00220 468 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 EPB41L2O43491 1005 aaKnown RBP18.24■□□□□ 0.51
LINC01220-201ENST00000558575 CCND3P30281 292 aaPredicted RBP18.24■□□□□ 0.51
LINC01220-201ENST00000558575 PLA2G5P39877 138 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 CACNB2Q08289 660 aaPredicted RBP18.24■□□□□ 0.51
LINC01220-201ENST00000558575 USP17L24Q0WX57 530 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 SEC23AQ15436 765 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 ADCK5Q3MIX3 580 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 CHST3Q7LGC8 479 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 NCOA7Q8NI08 942 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 LPAR1Q92633 364 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
LINC01220-201ENST00000558575 NUP88Q99567 741 aaPredicted RBP18.24■□□□□ 0.51
LINC01220-201ENST00000558575 LBHD1Q9BQE6 289 aaPredicted RBP18.24■□□□□ 0.51
LINC01220-201ENST00000558575 SYNPO2Q9UMS6 1093 aa18.24■□□□□ 0.51
LINC01220-201ENST00000558575 GCLCP48506 637 aaPredicted RBP18.23■□□□□ 0.51
LINC01220-201ENST00000558575 TRDNQ13061 729 aa18.23■□□□□ 0.51
LINC01220-201ENST00000558575 SHHQ15465 462 aa18.23■□□□□ 0.51
LINC01220-201ENST00000558575 C9orf50Q5SZB4 431 aa18.23■□□□□ 0.51
LINC01220-201ENST00000558575 RASGRP2Q7LDG7 609 aa18.23■□□□□ 0.51
LINC01220-201ENST00000558575 DGKHQ86XP1 1220 aa18.23■□□□□ 0.51
LINC01220-201ENST00000558575 ENAHQ8N8S7 591 aaPredicted RBP18.23■□□□□ 0.51
LINC01220-201ENST00000558575 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
LINC01220-201ENST00000558575 GOPCQ9HD26 462 aa18.23■□□□□ 0.51
LINC01220-201ENST00000558575 SNX14Q9Y5W7 946 aa18.23■□□□□ 0.51
LINC01220-201ENST00000558575 PEX10O60683 326 aa18.22■□□□□ 0.51
LINC01220-201ENST00000558575 TOP1P11387 765 aaKnown RBP18.22■□□□□ 0.51
LINC01220-201ENST00000558575 FOSL2P15408 326 aa18.22■□□□□ 0.51
LINC01220-201ENST00000558575 PABPC4Q13310 644 aaKnown RBP eCLIP18.22■□□□□ 0.51
LINC01220-201ENST00000558575 FAM83BQ5T0W9 1011 aa18.22■□□□□ 0.51
LINC01220-201ENST00000558575 RNF20Q5VTR2 975 aa18.22■□□□□ 0.51
LINC01220-201ENST00000558575 SLFN13Q68D06 897 aa18.22■□□□□ 0.51
LINC01220-201ENST00000558575 IQCA1Q86XH1 822 aa18.22■□□□□ 0.51
LINC01220-201ENST00000558575 USP38Q8NB14 1042 aa18.22■□□□□ 0.51
LINC01220-201ENST00000558575 SENP2Q9HC62 589 aa18.22■□□□□ 0.51
LINC01220-201ENST00000558575 GPHNQ9NQX3 736 aaPredicted RBP18.22■□□□□ 0.51
LINC01220-201ENST00000558575 MORF4L1Q9UBU8 362 aa18.22■□□□□ 0.51
LINC01220-201ENST00000558575 WDR46O15213 610 aaKnown RBP18.21■□□□□ 0.51
LINC01220-201ENST00000558575 MCCP23508 829 aa18.21■□□□□ 0.51
LINC01220-201ENST00000558575 CCL14Q16627 93 aa18.21■□□□□ 0.51
LINC01220-201ENST00000558575 TJAP1Q5JTD0 557 aa18.21■□□□□ 0.51
LINC01220-201ENST00000558575 PPP4R3BQ5MIZ7 849 aa18.21■□□□□ 0.51
LINC01220-201ENST00000558575 RALYLQ86SE5 291 aaKnown RBP18.21■□□□□ 0.51
LINC01220-201ENST00000558575 IGDCC4Q8TDY8 1250 aa18.21■□□□□ 0.51
LINC01220-201ENST00000558575 CHMP4CQ96CF2 233 aa18.21■□□□□ 0.51
LINC01220-201ENST00000558575 FBXO28Q9NVF7 368 aa18.21■□□□□ 0.51
LINC01220-201ENST00000558575 RBPJLQ9UBG7 517 aa18.21■□□□□ 0.51
LINC01220-201ENST00000558575 TNKSO95271 1327 aa18.21■□□□□ 0.51
LINC01220-201ENST00000558575 RAD21O60216 631 aa18.2■□□□□ 0.5
LINC01220-201ENST00000558575 HERVK_113P62684 666 aa18.2■□□□□ 0.5
LINC01220-201ENST00000558575 IRX3P78415 501 aaPredicted RBP18.2■□□□□ 0.5
LINC01220-201ENST00000558575 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
LINC01220-201ENST00000558575 COG2Q14746 738 aa18.2■□□□□ 0.5
LINC01220-201ENST00000558575 CCDC178Q5BJE1 867 aa18.2■□□□□ 0.5
LINC01220-201ENST00000558575 NEK1Q96PY6 1258 aa18.2■□□□□ 0.5
LINC01220-201ENST00000558575 TXNRD2Q9NNW7 524 aa18.2■□□□□ 0.5
LINC01220-201ENST00000558575 SPDYE16A6NNV3 312 aaPredicted RBP18.19■□□□□ 0.5
LINC01220-201ENST00000558575 CNMDO75829 334 aa18.19■□□□□ 0.5
LINC01220-201ENST00000558575 XRCC5P13010 732 aaKnown RBP18.19■□□□□ 0.5
LINC01220-201ENST00000558575 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms