RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 SLC35G1Q2M3R5 365 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 SYDE2Q5VT97 1194 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 RASGRP2Q7LDG7 609 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 PRRT2Q7Z6L0 340 aaPredicted RBP17.19■□□□□ 0.34
VPS18-202ENST00000558474 SPICE1Q8N0Z3 855 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 PRPF38AQ8NAV1 312 aaKnown RBP17.19■□□□□ 0.34
VPS18-202ENST00000558474 CCDC12Q8WUD4 166 aaPredicted RBP17.19■□□□□ 0.34
VPS18-202ENST00000558474 OPTNQ96CV9 577 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 CLMNQ96JQ2 1002 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 UBA5Q9GZZ9 404 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 JMJD4Q9H9V9 463 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 PNMA2Q9UL42 364 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 PARP14Q460N5 1801 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 MYPNQ86TC9 1320 aa17.19■□□□□ 0.34
VPS18-202ENST00000558474 IRF6O14896 467 aa17.18■□□□□ 0.34
VPS18-202ENST00000558474 ZBTB5O15062 677 aa17.18■□□□□ 0.34
VPS18-202ENST00000558474 ZSCAN22P10073 491 aaPredicted RBP17.18■□□□□ 0.34
VPS18-202ENST00000558474 ZBTB48P10074 688 aaPredicted RBP17.18■□□□□ 0.34
VPS18-202ENST00000558474 YY1P25490 414 aa17.18■□□□□ 0.34
VPS18-202ENST00000558474 HMGCS2P54868 508 aa17.18■□□□□ 0.34
VPS18-202ENST00000558474 FMR1Q06787 632 aaKnown RBP eCLIP17.18■□□□□ 0.343e-7■■■■□ 21.9
VPS18-202ENST00000558474 IKQ13123 557 aaPredicted RBP17.18■□□□□ 0.34
VPS18-202ENST00000558474 TTBK2Q6IQ55 1244 aa17.18■□□□□ 0.34
VPS18-202ENST00000558474 GALNT17Q6IS24 598 aa17.18■□□□□ 0.34
VPS18-202ENST00000558474 FASTKD5Q7L8L6 764 aaKnown RBP17.18■□□□□ 0.34
VPS18-202ENST00000558474 TEX2Q8IWB9 1127 aa17.18■□□□□ 0.34
VPS18-202ENST00000558474 CCDC148Q8NFR7 591 aa17.18■□□□□ 0.34
VPS18-202ENST00000558474 OTUD5Q96G74 571 aa17.18■□□□□ 0.34
VPS18-202ENST00000558474 NUP88Q99567 741 aaPredicted RBP17.18■□□□□ 0.34
VPS18-202ENST00000558474 ISY1Q9ULR0 285 aaKnown RBP17.18■□□□□ 0.34
VPS18-202ENST00000558474 MTMR6Q9Y217 621 aa17.18■□□□□ 0.34
VPS18-202ENST00000558474 USP17L15C9J2P7 530 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 USP17L13C9JLJ4 530 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 USP17L11C9JVI0 530 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 USP17L18D6R9N7 530 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 USP17L22D6RA61 530 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 USP17L17D6RBQ6 530 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 USP17L19D6RCP7 530 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 USP17L20D6RJB6 530 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 USP17L24Q0WX57 530 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 SNAPC2Q13487 334 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 PPP1R18Q6NYC8 613 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 HHIPL1Q96JK4 782 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 PIGSQ96S52 555 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 SLF1Q9BQI6 1058 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 ZSCAN16Q9H4T2 348 aaPredicted RBP17.17■□□□□ 0.34
VPS18-202ENST00000558474 RPAP3Q9H6T3 665 aaPredicted RBP17.17■□□□□ 0.34
VPS18-202ENST00000558474 BARHL2Q9NY43 387 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 PRR12Q9ULL5 1215 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 ATP6V1DQ9Y5K8 247 aa17.17■□□□□ 0.34
VPS18-202ENST00000558474 CALML3P27482 149 aa17.16■□□□□ 0.34
VPS18-202ENST00000558474 HOXA7P31268 230 aaPredicted RBP17.16■□□□□ 0.34
VPS18-202ENST00000558474 SLC16A2P36021 539 aa17.16■□□□□ 0.34
VPS18-202ENST00000558474 PABPC4Q13310 644 aaKnown RBP eCLIP17.16■□□□□ 0.34
VPS18-202ENST00000558474 SAFBQ15424 915 aaKnown RBP eCLIP17.16■□□□□ 0.34
VPS18-202ENST00000558474 KRT40Q6A162 431 aa17.16■□□□□ 0.34
VPS18-202ENST00000558474 CATSPERGQ6ZRH7 1159 aa17.16■□□□□ 0.34
VPS18-202ENST00000558474 WNK4Q96J92 1243 aa17.16■□□□□ 0.34
VPS18-202ENST00000558474 RANBP17Q9H2T7 1088 aaKnown RBP17.16■□□□□ 0.34
VPS18-202ENST00000558474 VAT1LQ9HCJ6 419 aa17.16■□□□□ 0.34
VPS18-202ENST00000558474 ESYT2A0FGR8 921 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 VPS37CA5D8V6 355 aaPredicted RBP17.15■□□□□ 0.34
VPS18-202ENST00000558474 PPFIA3O75145 1194 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 MMP1P03956 469 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 GTF2A2P52657 109 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 HUNKP57058 714 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 CDC37Q16543 378 aaPredicted RBP17.15■□□□□ 0.34
VPS18-202ENST00000558474 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 PHF20Q9BVI0 1012 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 TANGO6Q9C0B7 1094 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 GLT8D2Q9H1C3 349 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 CPVLQ9H3G5 476 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 HOXC10Q9NYD6 342 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 PPP1R9AQ9ULJ8 1098 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 ZDHHC9Q9Y397 364 aa17.15■□□□□ 0.34
VPS18-202ENST00000558474 RLFQ13129 1914 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 BAZ2BQ9UIF8 2168 aaKnown RBP17.14■□□□□ 0.33
VPS18-202ENST00000558474 STXBP3O00186 592 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 F13A1P00488 732 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 PKP1Q13835 747 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 COG2Q14746 738 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 QRICH1Q2TAL8 776 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 WWC2Q6AWC2 1192 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 SAPCD2Q86UD0 394 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 HOMER1Q86YM7 354 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 ZNF784Q8NCA9 323 aaPredicted RBP17.14■□□□□ 0.33
VPS18-202ENST00000558474 AIFM3Q96NN9 605 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 AMNQ9BXJ7 453 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 FOXP1Q9H334 677 aaPredicted RBP17.14■□□□□ 0.33
VPS18-202ENST00000558474 BRMS1Q9HCU9 246 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 ADAMTS5Q9UNA0 930 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 AGTPBP1Q9UPW5 1226 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 SLC45A1Q9Y2W3 748 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 TLL2Q9Y6L7 1015 aa17.14■□□□□ 0.33
VPS18-202ENST00000558474 hCG_1642624A0A1W2PR95 340 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 TMEM88BA6NKF7 163 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 DTNBO60941 627 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 FLOT1O75955 427 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 CETPP11597 493 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms