RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 CCAR1Q8IX12 1150 aaKnown RBP14.64□□□□□ -0.07
LRRC28-206ENST00000558471 COA7Q96BR5 231 aa14.64□□□□□ -0.07
LRRC28-206ENST00000558471 MOV10L1Q9BXT6 1211 aaKnown RBP14.64□□□□□ -0.07
LRRC28-206ENST00000558471 ZNFX1Q9P2E3 1918 aaKnown RBP14.64□□□□□ -0.07
LRRC28-206ENST00000558471 SMCHD1A6NHR9 2005 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 ZBED4O75132 1171 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 SEC24BO95487 1268 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 GOLGA8HP0CJ92 632 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 MAPK4P31152 587 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 PRMT2P55345 433 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 EXOSC10Q01780 885 aaKnown RBP14.63□□□□□ -0.07
LRRC28-206ENST00000558471 PRKCZQ05513 592 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 BTNL9Q6UXG8 535 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 TMEM87BQ96K49 555 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 LRRC2Q9BYS8 371 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 LY9Q9HBG7 655 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 SLC38A10Q9HBR0 1119 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 GJD2Q9UKL4 321 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 ZNF214Q9UL59 606 aaPredicted RBP14.63□□□□□ -0.07
LRRC28-206ENST00000558471 PRR12Q9ULL5 1215 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 PTCH2Q9Y6C5 1203 aa14.63□□□□□ -0.07
LRRC28-206ENST00000558471 SH2B2O14492 632 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-206ENST00000558471 ERCC3P19447 782 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 STAT3P40763 770 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 FLT3LGP49771 235 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 SNAP25P60880 206 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 WDR78Q5VTH9 848 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 DHX32Q7L7V1 743 aaKnown RBP14.62□□□□□ -0.07
LRRC28-206ENST00000558471 GPR142Q7Z601 462 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 PLEKHH3Q7Z736 793 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 RIOX2Q8IUF8 465 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 CPXCR1Q8N123 301 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 SHCBP1Q8NEM2 672 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 TCEANC2Q96MN5 208 aa14.62□□□□□ -0.07
LRRC28-206ENST00000558471 RAVER2Q9HCJ3 691 aaKnown RBP14.62□□□□□ -0.07
LRRC28-206ENST00000558471 ATP2A1O14983 1001 aa14.61□□□□□ -0.07
LRRC28-206ENST00000558471 PARP1P09874 1014 aaKnown RBP14.61□□□□□ -0.07
LRRC28-206ENST00000558471 FDX1P10109 184 aa14.61□□□□□ -0.07
LRRC28-206ENST00000558471 CPA1P15085 419 aa14.61□□□□□ -0.07
LRRC28-206ENST00000558471 GPATCH4Q5T3I0 446 aaKnown RBP14.61□□□□□ -0.07
LRRC28-206ENST00000558471 SYDE2Q5VT97 1194 aa14.61□□□□□ -0.07
LRRC28-206ENST00000558471 NCAPG2Q86XI2 1143 aa14.61□□□□□ -0.07
LRRC28-206ENST00000558471 ABHD8Q96I13 439 aa14.61□□□□□ -0.07
LRRC28-206ENST00000558471 JAKMIP1Q96N16 626 aaKnown RBP14.61□□□□□ -0.07
LRRC28-206ENST00000558471 UBA5Q9GZZ9 404 aa14.61□□□□□ -0.07
LRRC28-206ENST00000558471 CPVLQ9H3G5 476 aa14.61□□□□□ -0.07
LRRC28-206ENST00000558471 HPS5Q9UPZ3 1129 aa14.61□□□□□ -0.07
LRRC28-206ENST00000558471 RIPK3Q9Y572 518 aa14.61□□□□□ -0.07
LRRC28-206ENST00000558471 CTDP1Q9Y5B0 961 aaPredicted RBP14.61□□□□□ -0.07
LRRC28-206ENST00000558471 SLC25A27O95847 323 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 HMGB1P09429 215 aaKnown RBP14.6□□□□□ -0.07
LRRC28-206ENST00000558471 PTPREP23469 700 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 LIFRP42702 1097 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 SLC4A3P48751 1232 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 OAZ1P54368 228 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 TROAPQ12815 778 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 C8orf34Q49A92 452 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 ASPRV1Q53RT3 343 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 MORN1Q5T089 497 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 SNRNP48Q6IEG0 339 aaKnown RBP14.6□□□□□ -0.07
LRRC28-206ENST00000558471 TMTC2Q8N394 836 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 STAG2Q8N3U4 1231 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 RAET1EQ8TD07 263 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 TEX13BQ9BXU2 312 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 MROH8Q9H579 483 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 CWC22Q9HCG8 908 aaKnown RBP14.6□□□□□ -0.07
LRRC28-206ENST00000558471 ZNF536O15090 1300 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 WDR19Q8NEZ3 1342 aa14.6□□□□□ -0.07
LRRC28-206ENST00000558471 BAZ2BQ9UIF8 2168 aaKnown RBP14.6□□□□□ -0.07
LRRC28-206ENST00000558471 MYH6P13533 1939 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 PALM3A6NDB9 673 aaPredicted RBP14.59□□□□□ -0.07
LRRC28-206ENST00000558471 IRF5Q13568 498 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 GRM4Q14833 912 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 CCDC174Q6PII3 467 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 BLOC1S2Q6QNY1 142 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 NFXL1Q6ZNB6 911 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 CATIPQ7Z7H3 387 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 ZNF654Q8IZM8 581 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 USP6NLQ92738 828 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 AGBL1Q96MI9 1066 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 NUDT12Q9BQG2 462 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 MYL10Q9BUA6 226 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 RANBP17Q9H2T7 1088 aaKnown RBP14.59□□□□□ -0.07
LRRC28-206ENST00000558471 MAD2L2Q9UI95 211 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 IVNS1ABPQ9Y6Y0 642 aa14.59□□□□□ -0.07
LRRC28-206ENST00000558471 CCDC69A6NI79 296 aa14.58□□□□□ -0.08
LRRC28-206ENST00000558471 SLC15A5A6NIM6 579 aa14.58□□□□□ -0.08
LRRC28-206ENST00000558471 KLRF2D3W0D1 207 aa14.58□□□□□ -0.08
LRRC28-206ENST00000558471 STRNO43815 780 aa14.58□□□□□ -0.08
LRRC28-206ENST00000558471 EIF5BO60841 1220 aaKnown RBP14.58□□□□□ -0.08
LRRC28-206ENST00000558471 CYP2B6P20813 491 aa14.58□□□□□ -0.08
LRRC28-206ENST00000558471 PSMA5P28066 241 aa14.58□□□□□ -0.08
LRRC28-206ENST00000558471 GRB14Q14449 540 aa14.58□□□□□ -0.08
LRRC28-206ENST00000558471 ADGRF4Q8IZF3 695 aa14.58□□□□□ -0.08
LRRC28-206ENST00000558471 NUP133Q8WUM0 1156 aa14.58□□□□□ -0.08
LRRC28-206ENST00000558471 SOCS4Q8WXH5 440 aa14.58□□□□□ -0.08
LRRC28-206ENST00000558471 ADCY3O60266 1144 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 DDAH1O94760 285 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 CASTP20810 708 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms