RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 CRHR2Q13324 411 aa12.2□□□□□ -0.46
LRRC28-204ENST00000558172 NOM1Q5C9Z4 860 aaKnown RBP12.2□□□□□ -0.46
LRRC28-204ENST00000558172 FANCBQ8NB91 859 aa12.2□□□□□ -0.46
LRRC28-204ENST00000558172 KIFC2Q96AC6 838 aa12.2□□□□□ -0.46
LRRC28-204ENST00000558172 GPCPD1Q9NPB8 672 aa12.2□□□□□ -0.46
LRRC28-204ENST00000558172 ADAMTS5Q9UNA0 930 aa12.2□□□□□ -0.46
LRRC28-204ENST00000558172 RABGAP1Q9Y3P9 1069 aa12.2□□□□□ -0.46
LRRC28-204ENST00000558172 MGAMO43451 1857 aa12.2□□□□□ -0.46
LRRC28-204ENST00000558172 SPDYE16A6NNV3 312 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-204ENST00000558172 KLRF2D3W0D1 207 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 ZBED4O75132 1171 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 TBC1D8O95759 1140 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 GOLGA8HP0CJ92 632 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 SYDE2Q5VT97 1194 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 TTBK2Q6IQ55 1244 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 C17orf99Q6UX52 265 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 MICU3Q86XE3 530 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 CHMP4CQ96CF2 233 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 MYL10Q9BUA6 226 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 FBXO28Q9NVF7 368 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 MORF4L1Q9UBU8 362 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 PNMA2Q9UL42 364 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 PRR12Q9ULL5 1215 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 NAP1L2Q9ULW6 460 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-204ENST00000558172 CTDP1Q9Y5B0 961 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-204ENST00000558172 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
LRRC28-204ENST00000558172 CEP350Q5VT06 3117 aa12.19□□□□□ -0.46
LRRC28-204ENST00000558172 NID2Q14112 1375 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 SMCHD1A6NHR9 2005 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 DOCK3Q8IZD9 2030 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 GOLGA8AA7E2F4 631 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 GOLGA8BA8MQT2 603 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 VWA5AO00534 786 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 PDIA3P30101 505 aaKnown RBP12.18□□□□□ -0.46
LRRC28-204ENST00000558172 MCM2P49736 904 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 METAP2P50579 478 aaKnown RBP eCLIP12.18□□□□□ -0.46
LRRC28-204ENST00000558172 OAZ1P54368 228 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 RTN1Q16799 776 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 FAM110CQ1W6H9 321 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 RASGRP2Q7LDG7 609 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 STAG2Q8N3U4 1231 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 ATG4CQ96DT6 458 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 SLC38A10Q9HBR0 1119 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 RBPJLQ9UBG7 517 aa12.18□□□□□ -0.46
LRRC28-204ENST00000558172 ATP2A1O14983 1001 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 DHX16O60231 1041 aaKnown RBP12.17□□□□□ -0.46
LRRC28-204ENST00000558172 BCRP11274 1271 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 RXRAP19793 462 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 SLC16A2P36021 539 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 CCNA1P78396 465 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
LRRC28-204ENST00000558172 CCDC144CPQ8IYA2 1237 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 ADGRF4Q8IZF3 695 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 GPRC5AQ8NFJ5 357 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
LRRC28-204ENST00000558172 PAGR1Q9BTK6 254 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 UBA5Q9GZZ9 404 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 SLKQ9H2G2 1235 aaPredicted RBP12.17□□□□□ -0.46
LRRC28-204ENST00000558172 RANBP17Q9H2T7 1088 aaKnown RBP12.17□□□□□ -0.46
LRRC28-204ENST00000558172 RIOX1Q9H6W3 641 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 CPA4Q9UI42 421 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 LIMCH1Q9UPQ0 1083 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 HPS5Q9UPZ3 1129 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 PCNTO95613 3336 aa12.17□□□□□ -0.46
LRRC28-204ENST00000558172 CASP8AP2Q9UKL3 1982 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 GPR25O00155 361 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 COPB2P35606 906 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 ERVK-9P63128 1117 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 ERVK-24P63145 666 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 SP3Q02447 781 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 TRAF1Q13077 416 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 CPLX2Q6PUV4 134 aaKnown RBP12.16□□□□□ -0.46
LRRC28-204ENST00000558172 TMTC3Q6ZXV5 915 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 ANKRD13CQ8N6S4 541 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 REPS2Q8NFH8 660 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 SPZ1Q9BXG8 430 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 R3HDMLQ9H3Y0 253 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 JMJD4Q9H9V9 463 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 BTBD7Q9P203 1132 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 TPCN1Q9ULQ1 816 aa12.16□□□□□ -0.46
LRRC28-204ENST00000558172 PFKFB2O60825 505 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 CNMDO75829 334 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 SLC25A27O95847 323 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 HSPA1AP0DMV8 641 aaKnown RBP12.15□□□□□ -0.46
LRRC28-204ENST00000558172 HSPA1BP0DMV9 641 aaKnown RBP12.15□□□□□ -0.46
LRRC28-204ENST00000558172 CDC27P30260 824 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 ADD1P35611 737 aaKnown RBP12.15□□□□□ -0.46
LRRC28-204ENST00000558172 STAT3P40763 770 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.46
LRRC28-204ENST00000558172 KIF22Q14807 665 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 TMEM132BQ14DG7 1078 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 ARHGEF6Q15052 776 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 Q3C1V9 767 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 POTEEQ6S8J3 1075 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 CCAR1Q8IX12 1150 aaKnown RBP12.15□□□□□ -0.46
LRRC28-204ENST00000558172 SRBD1Q8N5C6 995 aaKnown RBP12.15□□□□□ -0.46
LRRC28-204ENST00000558172 SHCBP1Q8NEM2 672 aa12.15□□□□□ -0.46
LRRC28-204ENST00000558172 MTMR8Q96EF0 704 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms