RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 DISP2A7MBM2 1401 aa9.03□□□□□ -0.96
RTF1-204ENST00000558117 PLEKHH2Q8IVE3 1493 aa9.02□□□□□ -0.96
RTF1-204ENST00000558117 TCF3P15923 654 aa9.02□□□□□ -0.97
RTF1-204ENST00000558117 SEZ6Q53EL9 994 aa9.02□□□□□ -0.97
RTF1-204ENST00000558117 LETMD1Q6P1Q0 360 aa9.02□□□□□ -0.97
RTF1-204ENST00000558117 DPH2Q9BQC3 489 aaPredicted RBP9.02□□□□□ -0.97
RTF1-204ENST00000558117 CCDC39Q9UFE4 941 aa9.02□□□□□ -0.97
RTF1-204ENST00000558117 MAPK8IP1Q9UQF2 711 aa9.02□□□□□ -0.97
RTF1-204ENST00000558117 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.02□□□□□ -0.97
RTF1-204ENST00000558117 IGF2BP3O00425 579 aaKnown RBP eCLIP9.01□□□□□ -0.97
RTF1-204ENST00000558117 SLITRK5O94991 958 aa9.01□□□□□ -0.97
RTF1-204ENST00000558117 PRNPP04156 253 aa9.01□□□□□ -0.97
RTF1-204ENST00000558117 YARSP54577 528 aaKnown RBP9.01□□□□□ -0.97
RTF1-204ENST00000558117 MST1RQ04912 1400 aa9.01□□□□□ -0.97
RTF1-204ENST00000558117 APOBRQ0VD83 1088 aa9.01□□□□□ -0.97
RTF1-204ENST00000558117 IFI16Q16666 785 aaKnown RBP9.01□□□□□ -0.97
RTF1-204ENST00000558117 MCATQ8IVS2 390 aaKnown RBP9.01□□□□□ -0.97
RTF1-204ENST00000558117 STK11IPQ8N1F8 1099 aa9.01□□□□□ -0.97
RTF1-204ENST00000558117 PLD6Q8N2A8 252 aaKnown RBP9.01□□□□□ -0.97
RTF1-204ENST00000558117 FAM13CQ8NE31 585 aa9.01□□□□□ -0.97
RTF1-204ENST00000558117 ACSF2Q96CM8 615 aaPredicted RBP9.01□□□□□ -0.97
RTF1-204ENST00000558117 CAMKK2Q96RR4 588 aa9.01□□□□□ -0.97
RTF1-204ENST00000558117 PRR36Q9H6K5 1346 aa9.01□□□□□ -0.97
RTF1-204ENST00000558117 CHD2O14647 1828 aaKnown RBP9.01□□□□□ -0.97
RTF1-204ENST00000558117 UPK3BL1B0FP48 263 aa9□□□□□ -0.97
RTF1-204ENST00000558117 UPK3BL2E5RIL1 263 aa9□□□□□ -0.97
RTF1-204ENST00000558117 RBAK-RBAKDNI3L0D1 243 aa9□□□□□ -0.97
RTF1-204ENST00000558117 EOMESO95936 686 aa9□□□□□ -0.97
RTF1-204ENST00000558117 CYP7A1P22680 504 aa9□□□□□ -0.97
RTF1-204ENST00000558117 GP2P55259 537 aaKnown RBP9□□□□□ -0.97
RTF1-204ENST00000558117 OXCT1P55809 520 aa9□□□□□ -0.97
RTF1-204ENST00000558117 FLCNQ8NFG4 579 aa9□□□□□ -0.97
RTF1-204ENST00000558117 NKD1Q969G9 470 aa9□□□□□ -0.97
RTF1-204ENST00000558117 MISP3Q96FF7 219 aa9□□□□□ -0.97
RTF1-204ENST00000558117 IGSF5Q9NSI5 407 aa9□□□□□ -0.97
RTF1-204ENST00000558117 REV1Q9UBZ9 1251 aa9□□□□□ -0.97
RTF1-204ENST00000558117 DCCP43146 1447 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 HTR3BO95264 441 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 CLCQ05315 142 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 PAK2Q13177 524 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 SFRP5Q5T4F7 317 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 UNC5CLQ8IV45 518 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 SLITRK4Q8IW52 837 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 FBXL18Q96ME1 805 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 HEXIM2Q96MH2 286 aaKnown RBP8.99□□□□□ -0.97
RTF1-204ENST00000558117 ACBD3Q9H3P7 528 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 KLHL3Q9UH77 587 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 SLC5A6Q9Y289 635 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 PCDHB14Q9Y5E9 798 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 CHD4Q14839 1912 aa8.99□□□□□ -0.97
RTF1-204ENST00000558117 MYOM2P54296 1465 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 MBD5Q9P267 1494 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 TMEM265A0A087WTH1 108 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 DNAJA2O60884 412 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 ERCC5P28715 1186 aaPredicted RBP8.98□□□□□ -0.97
RTF1-204ENST00000558117 MCM4P33991 863 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 ETV3P41162 512 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 TMEM201Q5SNT2 666 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 TP53INP2Q8IXH6 220 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 RIN3Q8TB24 985 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 HRASLS5Q96KN8 279 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 TGIF2Q9GZN2 237 aa8.98□□□□□ -0.97
RTF1-204ENST00000558117 FMN1Q68DA7 1419 aa8.97□□□□□ -0.97
RTF1-204ENST00000558117 FAM155AB1AL88 458 aaPredicted RBP8.97□□□□□ -0.97
RTF1-204ENST00000558117 CHURC1-FNTBB4DL54 471 aa8.97□□□□□ -0.97
RTF1-204ENST00000558117 GK5Q6ZS86 529 aa8.97□□□□□ -0.97
RTF1-204ENST00000558117 FAM214BQ7L5A3 538 aa8.97□□□□□ -0.97
RTF1-204ENST00000558117 CYB5D2Q8WUJ1 264 aa8.97□□□□□ -0.97
RTF1-204ENST00000558117 COX4I2Q96KJ9 171 aa8.97□□□□□ -0.97
RTF1-204ENST00000558117 CFDP1Q9UEE9 299 aaPredicted RBP8.97□□□□□ -0.97
RTF1-204ENST00000558117 U3KQE9 123 aa8.97□□□□□ -0.97
RTF1-204ENST00000558117 PIK3C2BO00750 1634 aa8.97□□□□□ -0.97
RTF1-204ENST00000558117 EFCAB6Q5THR3 1501 aa8.96□□□□□ -0.97
RTF1-204ENST00000558117 TNNI2P48788 182 aa8.96□□□□□ -0.98
RTF1-204ENST00000558117 CHMP4BP1P59074 171 aa8.96□□□□□ -0.98
RTF1-204ENST00000558117 MFSD4AQ8N468 514 aa8.96□□□□□ -0.98
RTF1-204ENST00000558117 AGBL5Q8NDL9 886 aa8.96□□□□□ -0.98
RTF1-204ENST00000558117 BCL7CQ8WUZ0 217 aaPredicted RBP8.96□□□□□ -0.98
RTF1-204ENST00000558117 TBX22Q9Y458 520 aa8.96□□□□□ -0.98
RTF1-204ENST00000558117 CNTNAP4Q9C0A0 1308 aa8.96□□□□□ -0.98
RTF1-204ENST00000558117 SLIT2O94813 1529 aa8.95□□□□□ -0.98
RTF1-204ENST00000558117 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.95□□□□□ -0.98
RTF1-204ENST00000558117 ADAMTS4O75173 837 aa8.95□□□□□ -0.98
RTF1-204ENST00000558117 PRKCQQ04759 706 aa8.95□□□□□ -0.98
RTF1-204ENST00000558117 IDI1Q13907 227 aa8.95□□□□□ -0.98
RTF1-204ENST00000558117 CDH24Q86UP0 819 aa8.95□□□□□ -0.98
RTF1-204ENST00000558117 PHACTR4Q8IZ21 702 aa8.95□□□□□ -0.98
RTF1-204ENST00000558117 EHMT1Q9H9B1 1298 aa8.95□□□□□ -0.98
RTF1-204ENST00000558117 VAV3Q9UKW4 847 aa8.95□□□□□ -0.98
RTF1-204ENST00000558117 SNX11Q9Y5W9 270 aa8.95□□□□□ -0.98
RTF1-204ENST00000558117 ZNF644Q9H582 1327 aaPredicted RBP8.95□□□□□ -0.98
RTF1-204ENST00000558117 FAM83GA6ND36 823 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 ATE1O95260 518 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 CBX7O95931 251 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 ZNF165P49910 485 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 CLCN7P51798 805 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 AOC3Q16853 763 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 C22orf34Q6ZV56 151 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 SLFN12Q8IYM2 578 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 REXO1Q8N1G1 1221 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms