RNA–Protein interactions for RNA: ENST00000557985.2

TMEM250-204, Transcript of transmembrane protein 250, humanhuman

TSL 1 (best)

Gene TMEM250, Length 1,981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-204ENST00000557985 SNAP25P60880 206 aa24.71■■□□□ 1.55
TMEM250-204ENST00000557985 WWC2Q6AWC2 1192 aa24.71■■□□□ 1.55
TMEM250-204ENST00000557985 OXER1Q8TDS5 423 aa24.71■■□□□ 1.55
TMEM250-204ENST00000557985 PHF20Q9BVI0 1012 aa24.71■■□□□ 1.55
TMEM250-204ENST00000557985 SEC63Q9UGP8 760 aaKnown RBP24.71■■□□□ 1.55
TMEM250-204ENST00000557985 NF2P35240 595 aa24.71■■□□□ 1.55
TMEM250-204ENST00000557985 TYW1BQ6NUM6 668 aa24.71■■□□□ 1.55
TMEM250-204ENST00000557985 DIS3L2Q8IYB7 885 aaKnown RBP24.71■■□□□ 1.55
TMEM250-204ENST00000557985 TRIM75PA6NK02 468 aa24.7■■□□□ 1.54
TMEM250-204ENST00000557985 PRPF40AO75400 957 aaKnown RBP24.7■■□□□ 1.54
TMEM250-204ENST00000557985 MTMR2Q13614 643 aa24.7■■□□□ 1.54
TMEM250-204ENST00000557985 VGLL4Q14135 290 aa24.7■■□□□ 1.54
TMEM250-204ENST00000557985 SAFBQ15424 915 aaKnown RBP eCLIP24.7■■□□□ 1.54
TMEM250-204ENST00000557985 ADAMTS3O15072 1205 aa24.69■■□□□ 1.54
TMEM250-204ENST00000557985 NLRP5P59047 1200 aa24.69■■□□□ 1.54
TMEM250-204ENST00000557985 NR5A1Q13285 461 aa24.69■■□□□ 1.54
TMEM250-204ENST00000557985 SAMD1Q6SPF0 538 aaPredicted RBP24.69■■□□□ 1.54
TMEM250-204ENST00000557985 RGS22Q8NE09 1264 aa24.69■■□□□ 1.54
TMEM250-204ENST00000557985 CEBPZQ03701 1054 aaKnown RBP24.69■■□□□ 1.54
TMEM250-204ENST00000557985 ZNF280CQ8ND82 737 aa24.69■■□□□ 1.54
TMEM250-204ENST00000557985 KIAA1683Q9H0B3 1180 aa24.69■■□□□ 1.54
TMEM250-204ENST00000557985 ZNF408Q9H9D4 720 aa24.69■■□□□ 1.54
TMEM250-204ENST00000557985 STXBP3O00186 592 aa24.68■■□□□ 1.54
TMEM250-204ENST00000557985 FIBPO43427 364 aa24.68■■□□□ 1.54
TMEM250-204ENST00000557985 IREB2P48200 963 aaKnown RBP24.68■■□□□ 1.54
TMEM250-204ENST00000557985 COA7Q96BR5 231 aa24.68■■□□□ 1.54
TMEM250-204ENST00000557985 WDR18Q9BV38 432 aa24.68■■□□□ 1.54
TMEM250-204ENST00000557985 BARHL2Q9NY43 387 aa24.68■■□□□ 1.54
TMEM250-204ENST00000557985 PNMA6FA0A0J9YX94 578 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 GOLGA6L22H0YM25 854 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 U2AF2P26368 475 aaKnown RBP eCLIP24.67■■□□□ 1.54
TMEM250-204ENST00000557985 NOL9Q5SY16 702 aaKnown RBP24.67■■□□□ 1.54
TMEM250-204ENST00000557985 CNKSR2Q8WXI2 1034 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 FTOQ9C0B1 505 aaKnown RBP eCLIP24.67■■□□□ 1.54
TMEM250-204ENST00000557985 AS3MTQ9HBK9 375 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 EMILIN3Q9NT22 766 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 SNCAIPQ9Y6H5 919 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 PPP1R11O60927 126 aaPredicted RBP24.67■■□□□ 1.54
TMEM250-204ENST00000557985 NPY5RQ15761 445 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 TPRNQ4KMQ1 711 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 SYDE2Q5VT97 1194 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 CLMNQ96JQ2 1002 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 SH3GLB2Q9NR46 395 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 CSADQ9Y600 493 aa24.67■■□□□ 1.54
TMEM250-204ENST00000557985 STAT2P52630 851 aa24.66■■□□□ 1.54
TMEM250-204ENST00000557985 BACE1P56817 501 aa24.66■■□□□ 1.54
TMEM250-204ENST00000557985 MTMR8Q96EF0 704 aa24.66■■□□□ 1.54
TMEM250-204ENST00000557985 FBXO28Q9NVF7 368 aa24.66■■□□□ 1.54
TMEM250-204ENST00000557985 PRR12Q9ULL5 1215 aa24.66■■□□□ 1.54
TMEM250-204ENST00000557985 ZBTB5O15062 677 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 KRT2P35908 639 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 NAPAP54920 295 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 KRT85P78386 507 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 BTNL9Q6UXG8 535 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 BRAPQ7Z569 592 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 ELP3Q9H9T3 547 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 PHIPQ8WWQ0 1821 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 CDC37Q16543 378 aaPredicted RBP24.65■■□□□ 1.54
TMEM250-204ENST00000557985 QRICH1Q2TAL8 776 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 NOSTRINQ8IVI9 506 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 KIFC2Q96AC6 838 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 FOXP1Q9H334 677 aaPredicted RBP24.65■■□□□ 1.54
TMEM250-204ENST00000557985 LMBRD1Q9NUN5 540 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 AFG3L2Q9Y4W6 797 aa24.65■■□□□ 1.54
TMEM250-204ENST00000557985 HMGCS2P54868 508 aa24.64■■□□□ 1.54
TMEM250-204ENST00000557985 NOM1Q5C9Z4 860 aaKnown RBP24.64■■□□□ 1.54
TMEM250-204ENST00000557985 MYSM1Q5VVJ2 828 aa24.64■■□□□ 1.54
TMEM250-204ENST00000557985 LDHDQ86WU2 507 aa24.64■■□□□ 1.54
TMEM250-204ENST00000557985 MYH15Q9Y2K3 1946 aa24.64■■□□□ 1.53
TMEM250-204ENST00000557985 USP28Q96RU2 1077 aa24.63■■□□□ 1.53
TMEM250-204ENST00000557985 OTOFQ9HC10 1997 aa24.63■■□□□ 1.53
TMEM250-204ENST00000557985 SMCO2A6NFE2 343 aa24.63■■□□□ 1.53
TMEM250-204ENST00000557985 EARS2Q5JPH6 523 aaKnown RBP24.63■■□□□ 1.53
TMEM250-204ENST00000557985 ANKRD13AQ8IZ07 590 aa24.63■■□□□ 1.53
TMEM250-204ENST00000557985 CHURC1Q8WUH1 139 aa24.63■■□□□ 1.53
TMEM250-204ENST00000557985 LPAR1Q92633 364 aa24.63■■□□□ 1.53
TMEM250-204ENST00000557985 FAM205CA6NFA0 338 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 VCAM1P19320 739 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 USP14P54578 494 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 ARMC9Q7Z3E5 817 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 ZNF396Q96N95 335 aaPredicted RBP24.62■■□□□ 1.53
TMEM250-204ENST00000557985 BRMS1Q9HCU9 246 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 CALML3P27482 149 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 BLIDQ8IZY5 108 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 CCDC148Q8NFR7 591 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 RASGRP4Q8TDF6 673 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 TANGO6Q9C0B7 1094 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 FEM1BQ9UK73 627 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 CFAP45Q9UL16 551 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 PCDHA4Q9UN74 947 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 CLIC4Q9Y696 253 aa24.62■■□□□ 1.53
TMEM250-204ENST00000557985 SMCHD1A6NHR9 2005 aa24.61■■□□□ 1.53
TMEM250-204ENST00000557985 WDR46O15213 610 aaKnown RBP24.61■■□□□ 1.53
TMEM250-204ENST00000557985 GADD45BO75293 160 aaPredicted RBP24.61■■□□□ 1.53
TMEM250-204ENST00000557985 ZMYND12Q9H0C1 365 aa24.61■■□□□ 1.53
TMEM250-204ENST00000557985 RPAP3Q9H6T3 665 aaPredicted RBP24.61■■□□□ 1.53
TMEM250-204ENST00000557985 TAL1P17542 331 aaPredicted RBP24.6■■□□□ 1.53
TMEM250-204ENST00000557985 ATP2B1P20020 1258 aa24.6■■□□□ 1.53
TMEM250-204ENST00000557985 MAP3K11Q16584 847 aa24.6■■□□□ 1.53
TMEM250-204ENST00000557985 OTUD5Q96G74 571 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms