RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 WASHC2AQ641Q2 1341 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 TCRBV16S1A1N1A0A5B0 115 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 K7ESF4 209 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 AQP7O14520 342 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 FANCGO15287 622 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 DLX3O60479 287 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 GAS7O60861 476 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 ULK1O75385 1050 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 PRKD3O94806 890 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 UBOX5O94941 541 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 CAPNS1P04632 268 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 PF4V1P10720 104 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 VCAM1P19320 739 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 CYP2C19P33261 490 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 ADH7P40394 386 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 RECQLP46063 649 aaPredicted RBP4.8□□□□□ -1.64
TDP1-217ENST00000557782 HTR3AP46098 478 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 KCNJ6P48051 423 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 NEK3P51956 506 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 ERVK-24P63145 666 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 OCRLQ01968 901 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 PTSQ03393 145 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 ANKRD39Q53RE8 183 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 INO80DQ53TQ3 878 aaPredicted RBP4.8□□□□□ -1.64
TDP1-217ENST00000557782 ZC3H12AQ5D1E8 599 aaKnown RBP4.8□□□□□ -1.64
TDP1-217ENST00000557782 TMEM240Q5SV17 173 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 ACBD5Q5T8D3 534 aaPredicted RBP4.8□□□□□ -1.64
TDP1-217ENST00000557782 WDR78Q5VTH9 848 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 IL31Q6EBC2 164 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 PSAPL1Q6NUJ1 521 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 FOXR1Q6PIV2 292 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 CLEC4GQ6UXB4 293 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 C11orf74Q86VG3 221 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 HID1Q8IV36 788 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 TEX2Q8IWB9 1127 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 TPH2Q8IWU9 490 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 NME8Q8N427 588 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 ZNF513Q8N8E2 541 aaPredicted RBP4.8□□□□□ -1.64
TDP1-217ENST00000557782 ENAHQ8N8S7 591 aaPredicted RBP4.8□□□□□ -1.64
TDP1-217ENST00000557782 ZNF507Q8TCN5 953 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 USP33Q8TEY7 942 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 BTN2A2Q8WVV5 523 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 TTC17Q96AE7 1141 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 ZNF837Q96EG3 531 aaPredicted RBP4.8□□□□□ -1.64
TDP1-217ENST00000557782 FUBP3Q96I24 572 aaKnown RBP eCLIP4.8□□□□□ -1.64
TDP1-217ENST00000557782 RCC1LQ96I51 464 aaKnown RBP4.8□□□□□ -1.64
TDP1-217ENST00000557782 LGR4Q9BXB1 951 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 NRSN2Q9GZP1 204 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 PPCSQ9HAB8 311 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 GDF2Q9UK05 429 aaPredicted RBP4.8□□□□□ -1.64
TDP1-217ENST00000557782 NAGPAQ9UK23 515 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 ZKSCAN5Q9Y2L8 839 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 EMC9Q9Y3B6 208 aa4.8□□□□□ -1.64
TDP1-217ENST00000557782 ANO9A1A5B4 782 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 RASSF10A6NK89 507 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 M0R2C6 588 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 TBX3O15119 743 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 TBX1O43435 398 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 RGS9O75916 674 aaPredicted RBP4.79□□□□□ -1.64
TDP1-217ENST00000557782 KCNH1O95259 989 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 FKBP9O95302 570 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 CPP00450 1065 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 SNRPB2P08579 225 aaKnown RBP4.79□□□□□ -1.64
TDP1-217ENST00000557782 CD247P20963 164 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 HOXC12P31275 282 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 GFRA1P56159 465 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 CTBSQ01459 385 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 RING1Q06587 406 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 GTF2H3Q13889 308 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 GBX1Q14549 363 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 SAFBQ15424 915 aaKnown RBP eCLIP4.79□□□□□ -1.64
TDP1-217ENST00000557782 TMEM95Q3KNT9 176 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 ATP13A4Q4VNC1 1196 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 PPM1JQ5JR12 505 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 ZBTB37Q5TC79 503 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 FKBP9P1Q75LS8 142 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 PNMA8AQ86V59 439 aaPredicted RBP4.79□□□□□ -1.64
TDP1-217ENST00000557782 MORC1Q86VD1 984 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 C7orf61Q8IZ16 206 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 IL22RA1Q8N6P7 574 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 KCT2Q8NC54 265 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 ADCY4Q8NFM4 1077 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 MYRIPQ8NFW9 859 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 BAHD1Q8TBE0 780 aaPredicted RBP4.79□□□□□ -1.64
TDP1-217ENST00000557782 CYB5D2Q8WUJ1 264 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 GTPBP3Q969Y2 492 aaKnown RBP4.79□□□□□ -1.64
TDP1-217ENST00000557782 TIFAQ96CG3 184 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 WDR89Q96FK6 387 aaPredicted RBP4.79□□□□□ -1.64
TDP1-217ENST00000557782 STRBPQ96SI9 672 aaKnown RBP4.79□□□□□ -1.64
TDP1-217ENST00000557782 ELAC2Q9BQ52 826 aaKnown RBP4.79□□□□□ -1.64
TDP1-217ENST00000557782 USP26Q9BXU7 913 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 SAMD15Q9P1V8 674 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 PUF60Q9UHX1 559 aaKnown RBP4.79□□□□□ -1.64
TDP1-217ENST00000557782 DAAM1Q9Y4D1 1078 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 ZNF451Q9Y4E5 1061 aa4.79□□□□□ -1.64
TDP1-217ENST00000557782 LAS1LQ9Y4W2 734 aaKnown RBP4.79□□□□□ -1.64
TDP1-217ENST00000557782 SYNGAP1Q96PV0 1343 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 BLACEA4D250 179 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 LINC01387J3KSC0 135 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 FSCN2O14926 492 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms