RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 USP34Q70CQ2 3546 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 SLC15A5A6NIM6 579 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 PRR33A8MZF0 331 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 GRM8O00222 908 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 ERC2O15083 957 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 HOXC6P09630 235 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 CYP2C19P33261 490 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 PICALMQ13492 652 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 WDR78Q5VTH9 848 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 PPP1R18Q6NYC8 613 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 TRPV1Q8NER1 839 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 HERVK_113Q902F9 699 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 CLUAP1Q96AJ1 413 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 THAP11Q96EK4 314 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 TMEM39AQ9NV64 488 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 IVNS1ABPQ9Y6Y0 642 aa8.42□□□□□ -1.06
SPTLC2-206ENST00000557566 PRRC2BQ5JSZ5 2229 aaKnown RBP8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 GRXCR1A8MXD5 290 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 NRG2O14511 850 aaPredicted RBP8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 SEPT4O43236 478 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 RAD21O60216 631 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 PQBP1O60828 265 aaKnown RBP8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 CAP2P40123 477 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 BACE1P56817 501 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 NHLH1Q02575 133 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 LRRC41Q15345 812 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 PUM3Q15397 648 aaKnown RBP8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 ANO1Q5XXA6 986 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 VGLL2Q8N8G2 317 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 SLC44A5Q8NCS7 719 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 WDR18Q9BV38 432 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 SLC28A3Q9HAS3 691 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 MRS2Q9HD23 443 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 C9orf78Q9NZ63 289 aaPredicted RBP8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 COG6Q9Y2V7 657 aa8.41□□□□□ -1.06
SPTLC2-206ENST00000557566 ZDBF2Q9HCK1 2354 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 GAKO14976 1311 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 C19orf81C9J6K1 198 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 PI4K2BG5E9Z4 385 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 TRAK2O60296 914 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 SLC5A1P13866 664 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 CTDSPL2Q05D32 466 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 PPIGQ13427 754 aaKnown RBP eCLIP8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 GRB14Q14449 540 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 TWISTNBQ3B726 338 aaPredicted RBP8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 LRRC24Q50LG9 513 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 BEND3Q5T5X7 828 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 PRR7Q8TB68 274 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 KCNH6Q9H252 994 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 DDX4Q9NQI0 724 aaKnown RBP8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 COG5Q9UP83 839 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 PHF24Q9UPV7 400 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 RABGAP1Q9Y3P9 1069 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 NDUFB9Q9Y6M9 179 aa8.4□□□□□ -1.06
SPTLC2-206ENST00000557566 ZNF236Q9UL36 1845 aa8.4□□□□□ -1.07
SPTLC2-206ENST00000557566 SMCHD1A6NHR9 2005 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 SALL1Q9NSC2 1324 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 DCDC2CA8MYV0 355 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 USP17L10C9JJH3 530 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 TIMP1P01033 207 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 ASNSP08243 561 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 FOXK2Q01167 660 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 RALBP1Q15311 655 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 TMEM240Q5SV17 173 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 RASIP1Q5U651 963 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 OLFML2BQ68BL8 750 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 MFSD5Q6N075 450 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 PSRC1Q6PGN9 363 aaPredicted RBP8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 DZIP1Q86YF9 867 aaKnown RBP8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 ZGPATQ8N5A5 531 aaKnown RBP8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 NPLOC4Q8TAT6 608 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 POM121Q96HA1 1249 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 TOX2Q96NM4 488 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 PRKD2Q9BZL6 878 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 NKX2-4Q9H2Z4 354 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 PRM3Q9NNZ6 103 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 GNL3LQ9NVN8 582 aaKnown RBP8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 ADAMTS8Q9UP79 889 aa8.39□□□□□ -1.07
SPTLC2-206ENST00000557566 A0A1W2PQ45 241 aaPredicted RBP8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 A0A1W2PQY0 241 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 IGHA2P01877 340 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 FGFR2P21802 821 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 BTDP43251 543 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 IRX6P78412 446 aaPredicted RBP8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 FAAP100Q0VG06 881 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 MSS51Q4VC12 460 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 FAM47AQ5JRC9 791 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 B4GALNT3Q6L9W6 998 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 ANKRD33Q7Z3H0 272 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 DPP9Q86TI2 863 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 FAM160A2Q8N612 972 aaPredicted RBP8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 LPIN2Q92539 896 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 TSR2Q969E8 191 aaKnown RBP8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 UIMC1Q96RL1 719 aa8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 MTIF3Q9H2K0 278 aaKnown RBP8.38□□□□□ -1.07
SPTLC2-206ENST00000557566 HERC5Q9UII4 1024 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms