RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 NKAPLQ5M9Q1 402 aa6.75□□□□□ -1.33
PRPF39-212ENST00000557477 C16orf86Q6ZW13 317 aa6.75□□□□□ -1.33
PRPF39-212ENST00000557477 KIAA0907Q7Z7F0 614 aaPredicted RBP6.75□□□□□ -1.33
PRPF39-212ENST00000557477 TRIM59Q8IWR1 403 aa6.75□□□□□ -1.33
PRPF39-212ENST00000557477 BTN2A2Q8WVV5 523 aa6.75□□□□□ -1.33
PRPF39-212ENST00000557477 ZDHHC15Q96MV8 337 aa6.75□□□□□ -1.33
PRPF39-212ENST00000557477 AARSD1Q9BTE6 412 aaKnown RBP6.75□□□□□ -1.33
PRPF39-212ENST00000557477 DSCC1Q9BVC3 393 aa6.75□□□□□ -1.33
PRPF39-212ENST00000557477 CWC22Q9HCG8 908 aaKnown RBP6.75□□□□□ -1.33
PRPF39-212ENST00000557477 RB1CC1Q8TDY2 1594 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 TRAV20A0A0B4J274 112 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 H0Y8X5 98 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 NOP56O00567 594 aaKnown RBP6.74□□□□□ -1.33
PRPF39-212ENST00000557477 PPP1R12AO14974 1030 aaPredicted RBP6.74□□□□□ -1.33
PRPF39-212ENST00000557477 KCNH1O95259 989 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 ASMTLO95671 621 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 IGLV1-40P01703 118 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 FSTP19883 344 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 FAM209AQ5JX71 171 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 DUSP27Q5VZP5 1158 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 PIWIL2Q8TC59 973 aaKnown RBP6.74□□□□□ -1.33
PRPF39-212ENST00000557477 SLC26A8Q96RN1 970 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 OSBPL1AQ9BXW6 950 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 HDAC8Q9BY41 377 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 CHST7Q9NS84 486 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 PRR13Q9NZ81 148 aa6.74□□□□□ -1.33
PRPF39-212ENST00000557477 FAM155AB1AL88 458 aaPredicted RBP6.73□□□□□ -1.33
PRPF39-212ENST00000557477 DYRK3O43781 588 aa6.73□□□□□ -1.33
PRPF39-212ENST00000557477 CTSKP43235 329 aa6.73□□□□□ -1.33
PRPF39-212ENST00000557477 SF1Q15637 639 aaKnown RBP6.73□□□□□ -1.33
PRPF39-212ENST00000557477 NKPD1Q17RQ9 610 aa6.73□□□□□ -1.33
PRPF39-212ENST00000557477 GTF2IRD2BQ6EKJ0 949 aa6.73□□□□□ -1.33
PRPF39-212ENST00000557477 POMZP3Q6PJE2 187 aa6.73□□□□□ -1.33
PRPF39-212ENST00000557477 CRTC3Q6UUV7 619 aa6.73□□□□□ -1.33
PRPF39-212ENST00000557477 GTF2IRD2Q86UP8 949 aa6.73□□□□□ -1.33
PRPF39-212ENST00000557477 SPACA3Q8IXA5 215 aa6.73□□□□□ -1.33
PRPF39-212ENST00000557477 LRRC4CQ9HCJ2 640 aa6.73□□□□□ -1.33
PRPF39-212ENST00000557477 DIS3Q9Y2L1 958 aaKnown RBP6.73□□□□□ -1.33
PRPF39-212ENST00000557477 ST14Q9Y5Y6 855 aa6.73□□□□□ -1.33
PRPF39-212ENST00000557477 KRTAP9-6A0A140TA67 174 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 WASH4PA8MWX3 477 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 GSC2O15499 205 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 PRODHO43272 600 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 VAMP4O75379 141 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 CLSTN1O94985 981 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 CEACAM5P06731 702 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 FGFR1P11362 822 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 SRFP11831 508 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 CDKAL1Q5VV42 579 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 KISS1RQ969F8 398 aaPredicted RBP6.72□□□□□ -1.33
PRPF39-212ENST00000557477 OSBP2Q969R2 916 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 FEZ1Q99689 392 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 CDC6Q99741 560 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 IER2Q9BTL4 223 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 METTL22Q9BUU2 404 aaPredicted RBP6.72□□□□□ -1.33
PRPF39-212ENST00000557477 GPR62Q9BZJ7 368 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 ASCC2Q9H1I8 757 aaPredicted RBP6.72□□□□□ -1.33
PRPF39-212ENST00000557477 DUSP15Q9H1R2 295 aaPredicted RBP6.72□□□□□ -1.33
PRPF39-212ENST00000557477 SEMA6BQ9H3T3 888 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 ATG3Q9NT62 314 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 PLAGL2Q9UPG8 496 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 GPR55Q9Y2T6 319 aaPredicted RBP6.72□□□□□ -1.33
PRPF39-212ENST00000557477 MRPS23Q9Y3D9 190 aaKnown RBP6.72□□□□□ -1.33
PRPF39-212ENST00000557477 CD2APQ9Y5K6 639 aa6.72□□□□□ -1.33
PRPF39-212ENST00000557477 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
PRPF39-212ENST00000557477 PABPC1P11940 636 aaKnown RBP6.71□□□□□ -1.34
PRPF39-212ENST00000557477 GRB10Q13322 594 aa6.71□□□□□ -1.34
PRPF39-212ENST00000557477 CBX2Q14781 532 aaPredicted RBP6.71□□□□□ -1.34
PRPF39-212ENST00000557477 TCEA2Q15560 299 aa6.71□□□□□ -1.34
PRPF39-212ENST00000557477 C21orf62-AS1Q17RA5 79 aa6.71□□□□□ -1.34
PRPF39-212ENST00000557477 CLEC16AQ2KHT3 1053 aa6.71□□□□□ -1.34
PRPF39-212ENST00000557477 DPY19L1Q2PZI1 675 aa6.71□□□□□ -1.34
PRPF39-212ENST00000557477 ZC3H12BQ5HYM0 836 aaKnown RBP6.71□□□□□ -1.34
PRPF39-212ENST00000557477 NSMFQ6X4W1 530 aa6.71□□□□□ -1.34
PRPF39-212ENST00000557477 ARHGAP27Q6ZUM4 889 aa6.71□□□□□ -1.34
PRPF39-212ENST00000557477 CRACR2BQ8N4Y2 399 aaPredicted RBP6.71□□□□□ -1.34
PRPF39-212ENST00000557477 MCMBPQ9BTE3 642 aa6.71□□□□□ -1.34
PRPF39-212ENST00000557477 DHRS4Q9BTZ2 278 aa6.71□□□□□ -1.34
PRPF39-212ENST00000557477 SF3B6Q9Y3B4 125 aaKnown RBP6.71□□□□□ -1.34
PRPF39-212ENST00000557477 H3BS24 57 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 DLX3O60479 287 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 GYS2P54840 703 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 GFRA1P56159 465 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 AMPD2Q01433 879 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 CYP4F3Q08477 520 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 ZDHHC13Q8IUH4 622 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 PLD6Q8N2A8 252 aaKnown RBP6.7□□□□□ -1.34
PRPF39-212ENST00000557477 DAGLBQ8NCG7 672 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 TCTN2Q96GX1 697 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 HSPA12BQ96MM6 686 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 NKX2-4Q9H2Z4 354 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 MKNK2Q9HBH9 465 aa6.7□□□□□ -1.34
PRPF39-212ENST00000557477 PRR19A6NJB7 356 aa6.69□□□□□ -1.34
PRPF39-212ENST00000557477 STXBP3O00186 592 aa6.69□□□□□ -1.34
PRPF39-212ENST00000557477 GSNP06396 782 aa6.69□□□□□ -1.34
PRPF39-212ENST00000557477 CD3EP07766 207 aa6.69□□□□□ -1.34
PRPF39-212ENST00000557477 SNRPB2P08579 225 aaKnown RBP6.69□□□□□ -1.34
PRPF39-212ENST00000557477 CPSF6Q16630 551 aaKnown RBP eCLIP6.69□□□□□ -1.34
PRPF39-212ENST00000557477 PRSS53Q2L4Q9 553 aa6.69□□□□□ -1.34
PRPF39-212ENST00000557477 SCUBE1Q8IWY4 988 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms