RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 TMEM179Q6ZVK1 233 aa9.77□□□□□ -0.85
PCNX1-215ENST00000557428 C16orf59Q7L2K0 433 aa9.77□□□□□ -0.85
PCNX1-215ENST00000557428 OTOP2Q7RTS6 562 aa9.77□□□□□ -0.85
PCNX1-215ENST00000557428 CRNKL1Q9BZJ0 848 aaKnown RBP9.77□□□□□ -0.85
PCNX1-215ENST00000557428 SPC25Q9HBM1 224 aa9.77□□□□□ -0.85
PCNX1-215ENST00000557428 FBXO28Q9NVF7 368 aa9.77□□□□□ -0.85
PCNX1-215ENST00000557428 CXXC1Q9P0U4 656 aaPredicted RBP9.77□□□□□ -0.85
PCNX1-215ENST00000557428 FAM184BQ9ULE4 1060 aa9.77□□□□□ -0.85
PCNX1-215ENST00000557428 YBX2Q9Y2T7 364 aaKnown RBP9.77□□□□□ -0.85
PCNX1-215ENST00000557428 XIRP2A4UGR9 3374 aa9.77□□□□□ -0.85
PCNX1-215ENST00000557428 NCOR1O75376 2440 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 A0A0U1RQG5 324 aaPredicted RBP9.76□□□□□ -0.85
PCNX1-215ENST00000557428 FAM86C2PA6NEL3 165 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 WDR46O15213 610 aaKnown RBP9.76□□□□□ -0.85
PCNX1-215ENST00000557428 SURF6O75683 361 aaKnown RBP9.76□□□□□ -0.85
PCNX1-215ENST00000557428 ASGR1P07306 291 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 AAK1Q2M2I8 961 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 ZNF792Q3KQV3 632 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 SDR42E1Q8WUS8 393 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 DDX11Q96FC9 970 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 DYNLL2Q96FJ2 89 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 LRFN3Q9BTN0 628 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 BCL11AQ9H165 835 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 EPHX3Q9H6B9 360 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 ANTXR1Q9H6X2 564 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 VCPKMTQ9H867 229 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 IL23AQ9NPF7 189 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 GPR108Q9NPR9 543 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 DBNLQ9UJU6 430 aaKnown RBP9.76□□□□□ -0.85
PCNX1-215ENST00000557428 TNNQ9UQP3 1299 aa9.76□□□□□ -0.85
PCNX1-215ENST00000557428 ARVCFO00192 962 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 BCAR3O75815 825 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 FGBP02675 491 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 AKR1B1P15121 316 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 MYOGP15173 224 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 STAT3P40763 770 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 CCL23P55773 120 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 TMEM31Q5JXX7 168 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 RASIP1Q5U651 963 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 NOL8Q76FK4 1167 aaKnown RBP9.75□□□□□ -0.85
PCNX1-215ENST00000557428 RIOX2Q8IUF8 465 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 PCSK9Q8NBP7 692 aaKnown RBP9.75□□□□□ -0.85
PCNX1-215ENST00000557428 FRAT1Q92837 279 aaPredicted RBP9.75□□□□□ -0.85
PCNX1-215ENST00000557428 CLUAP1Q96AJ1 413 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 HIPK3Q9H422 1215 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 C1orf115Q9H7X2 142 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 CERS4Q9HA82 394 aa9.75□□□□□ -0.85
PCNX1-215ENST00000557428 ZBTB47Q9UFB7 747 aaPredicted RBP9.75□□□□□ -0.85
PCNX1-215ENST00000557428 CTDP1Q9Y5B0 961 aaPredicted RBP9.75□□□□□ -0.85
PCNX1-215ENST00000557428 RFXAPO00287 272 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 GTPBP6O43824 516 aaPredicted RBP9.74□□□□□ -0.85
PCNX1-215ENST00000557428 DUSP11O75319 330 aaKnown RBP9.74□□□□□ -0.85
PCNX1-215ENST00000557428 BMP1P13497 986 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 COPB2P35606 906 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 BEX3Q00994 111 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 GABPAQ06546 454 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 GNASQ5JWF2 1037 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 FAM83BQ5T0W9 1011 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 SNRNP48Q6IEG0 339 aaKnown RBP9.74□□□□□ -0.85
PCNX1-215ENST00000557428 FAM126BQ8IXS8 530 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 KLHDC9Q8NEP7 349 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 SPDYE1Q8NFV5 336 aaPredicted RBP9.74□□□□□ -0.85
PCNX1-215ENST00000557428 HERVK_113Q902F9 699 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 RIOK1Q9BRS2 568 aaKnown RBP9.74□□□□□ -0.85
PCNX1-215ENST00000557428 GOPCQ9HD26 462 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 DIS3Q9Y2L1 958 aaKnown RBP9.74□□□□□ -0.85
PCNX1-215ENST00000557428 TMX2Q9Y320 296 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 SLC4A7Q9Y6M7 1214 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 ELP1O95163 1332 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 UMODL1Q5DID0 1318 aa9.74□□□□□ -0.85
PCNX1-215ENST00000557428 COL4A4P53420 1690 aaPredicted RBP9.74□□□□□ -0.85
PCNX1-215ENST00000557428 VWA5AO00534 786 aa9.73□□□□□ -0.85
PCNX1-215ENST00000557428 ADCY6O43306 1168 aa9.73□□□□□ -0.85
PCNX1-215ENST00000557428 IGSF3O75054 1194 aa9.73□□□□□ -0.85
PCNX1-215ENST00000557428 SNAI1O95863 264 aaPredicted RBP9.73□□□□□ -0.85
PCNX1-215ENST00000557428 RARSP54136 660 aaKnown RBP9.73□□□□□ -0.85
PCNX1-215ENST00000557428 ACVR2BQ13705 512 aa9.73□□□□□ -0.85
PCNX1-215ENST00000557428 ALYREFQ86V81 257 aaKnown RBP9.73□□□□□ -0.85
PCNX1-215ENST00000557428 AMOTL1Q8IY63 956 aa9.73□□□□□ -0.85
PCNX1-215ENST00000557428 ZNF512BQ96KM6 892 aaPredicted RBP9.73□□□□□ -0.85
PCNX1-215ENST00000557428 NUP88Q99567 741 aaPredicted RBP9.73□□□□□ -0.85
PCNX1-215ENST00000557428 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.73□□□□□ -0.85
PCNX1-215ENST00000557428 SWAP70Q9UH65 585 aa9.73□□□□□ -0.85
PCNX1-215ENST00000557428 PPP1R9AQ9ULJ8 1098 aa9.73□□□□□ -0.85
PCNX1-215ENST00000557428 TRANK1O15050 2925 aa9.73□□□□□ -0.85
PCNX1-215ENST00000557428 SYNGAP1Q96PV0 1343 aa9.73□□□□□ -0.85
PCNX1-215ENST00000557428 MYH4Q9Y623 1939 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 SCN5AQ14524 2016 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 CYP2D7A0A087X1C5 515 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 CT47B1P0C2W7 299 aaPredicted RBP9.72□□□□□ -0.85
PCNX1-215ENST00000557428 EEF2P13639 858 aaKnown RBP9.72□□□□□ -0.85
PCNX1-215ENST00000557428 TRIM27P14373 513 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 PDE6AP16499 860 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 CST5P28325 142 aaPredicted RBP9.72□□□□□ -0.85
PCNX1-215ENST00000557428 CDK7P50613 346 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 CCDC144BQ3MJ40 725 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 SLC9C2Q5TAH2 1124 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 KRT40Q6A162 431 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 CCSAPQ6IQ19 270 aaPredicted RBP9.72□□□□□ -0.85
PCNX1-215ENST00000557428 AACSQ86V21 672 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms