RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 GUCY2CP25092 1073 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 TPP2P29144 1249 aaPredicted RBP6.01□□□□□ -1.45
CHD8-212ENST00000557329 AFMP43652 599 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 NBPF12Q5TAG4 269 aaPredicted RBP6.01□□□□□ -1.45
CHD8-212ENST00000557329 FBXW10Q5XX13 1052 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 ZNF655Q8N720 491 aaPredicted RBP6.01□□□□□ -1.45
CHD8-212ENST00000557329 DAGLBQ8NCG7 672 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 FLAD1Q8NFF5 587 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 SYTL5Q8TDW5 730 aaPredicted RBP6.01□□□□□ -1.45
CHD8-212ENST00000557329 CPLX3Q8WVH0 158 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 Q96M66 194 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 KRTAP4-2Q9BYR5 136 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 DUSP15Q9H1R2 295 aaPredicted RBP6.01□□□□□ -1.45
CHD8-212ENST00000557329 RC3H2Q9HBD1 1191 aaKnown RBP6.01□□□□□ -1.45
CHD8-212ENST00000557329 U3KQE9 123 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 IQGAP2Q13576 1575 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 CFAP43Q8NDM7 1665 aa6.01□□□□□ -1.45
CHD8-212ENST00000557329 YEATS2Q9ULM3 1422 aa6□□□□□ -1.45
CHD8-212ENST00000557329 DNAJA2O60884 412 aa6□□□□□ -1.45
CHD8-212ENST00000557329 GDNFP39905 211 aa6□□□□□ -1.45
CHD8-212ENST00000557329 RBM25P49756 843 aaKnown RBP6□□□□□ -1.45
CHD8-212ENST00000557329 ANKRD39Q53RE8 183 aa6□□□□□ -1.45
CHD8-212ENST00000557329 ZNF574Q6ZN55 896 aaPredicted RBP6□□□□□ -1.45
CHD8-212ENST00000557329 ALPK1Q96QP1 1244 aa6□□□□□ -1.45
CHD8-212ENST00000557329 SRRTQ9BXP5 876 aaKnown RBP6□□□□□ -1.45
CHD8-212ENST00000557329 ATP13A1Q9HD20 1204 aa6□□□□□ -1.45
CHD8-212ENST00000557329 SUCOQ9UBS9 1254 aaKnown RBP6□□□□□ -1.45
CHD8-212ENST00000557329 DUSP13Q9UII6 198 aa6□□□□□ -1.45
CHD8-212ENST00000557329 EFR3BQ9Y2G0 817 aa6□□□□□ -1.45
CHD8-212ENST00000557329 HSPA1LP34931 641 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 GIPRP48546 466 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 PMS1P54277 932 aaKnown RBP5.99□□□□□ -1.45
CHD8-212ENST00000557329 DUSP4Q13115 394 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 NMIQ13287 307 aaPredicted RBP5.99□□□□□ -1.45
CHD8-212ENST00000557329 GAB4Q2WGN9 574 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 NBPF9Q3BBW0 867 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 RNF111Q6ZNA4 994 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 WFDC3Q8IUB2 231 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 SPPL2CQ8IUH8 684 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 PHAXQ9H814 394 aaKnown RBP5.99□□□□□ -1.45
CHD8-212ENST00000557329 CARS2Q9HA77 564 aaKnown RBP5.99□□□□□ -1.45
CHD8-212ENST00000557329 GINM1Q9NU53 330 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 MBNL3Q9NUK0 354 aaKnown RBP5.99□□□□□ -1.45
CHD8-212ENST00000557329 FAM53CQ9NYF3 392 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 PCDHB12Q9Y5F1 795 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 DISP1Q96F81 1524 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 CNTNAP4Q9C0A0 1308 aa5.99□□□□□ -1.45
CHD8-212ENST00000557329 SSU72P8A0A1W2PR75 194 aa5.98□□□□□ -1.45
CHD8-212ENST00000557329 RNASE1P07998 156 aaKnown RBP5.98□□□□□ -1.45
CHD8-212ENST00000557329 LTKP29376 864 aa5.98□□□□□ -1.45
CHD8-212ENST00000557329 PCBP3P57721 371 aaKnown RBP5.98□□□□□ -1.45
CHD8-212ENST00000557329 CREG2Q8IUH2 290 aa5.98□□□□□ -1.45
CHD8-212ENST00000557329 OXR1Q8N573 874 aa5.98□□□□□ -1.45
CHD8-212ENST00000557329 SLC6A18Q96N87 628 aa5.98□□□□□ -1.45
CHD8-212ENST00000557329 MKRN2Q9H000 416 aaKnown RBP5.98□□□□□ -1.45
CHD8-212ENST00000557329 ARAP3Q8WWN8 1544 aa5.98□□□□□ -1.45
CHD8-212ENST00000557329 NAT2P11245 290 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 CASP7P55210 303 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 CHRNEQ04844 493 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 TNNI3KQ59H18 835 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 C9orf131Q5VYM1 1079 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 LSRQ86X29 649 aaPredicted RBP5.97□□□□□ -1.45
CHD8-212ENST00000557329 LILRA2Q8N149 483 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 SLC43A3Q8NBI5 491 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 SLC9A7Q96T83 725 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 TMEM59LQ9UK28 342 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 PPT2Q9UMR5 302 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 UHRF1BP1Q6BDS2 1440 aa5.97□□□□□ -1.45
CHD8-212ENST00000557329 FANCAO15360 1455 aa5.96□□□□□ -1.45
CHD8-212ENST00000557329 PHLDB1Q86UU1 1377 aa5.96□□□□□ -1.45
CHD8-212ENST00000557329 A0A087WZG4 1122 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 SIGLEC6O43699 453 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 ESR1P03372 595 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 ATF4P18848 351 aaPredicted RBP5.96□□□□□ -1.46
CHD8-212ENST00000557329 NASPP49321 788 aaPredicted RBP5.96□□□□□ -1.46
CHD8-212ENST00000557329 EGR3Q06889 387 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 AUHQ13825 339 aaKnown RBP5.96□□□□□ -1.46
CHD8-212ENST00000557329 TCEAL1Q15170 157 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 CCDC144CPQ8IYA2 1237 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 C7orf61Q8IZ16 206 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 LINC00116Q8NCU8 138 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 ACBD3Q9H3P7 528 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 FBXL21Q9UKT6 434 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 AKNAQ7Z591 1439 aa5.96□□□□□ -1.46
CHD8-212ENST00000557329 ZNF335Q9H4Z2 1342 aaPredicted RBP5.96□□□□□ -1.46
CHD8-212ENST00000557329 FITM1A5D6W6 292 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 TOM1O60784 492 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 PAPLNO95428 1278 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 SSBP05455 408 aaKnown RBP eCLIP5.95□□□□□ -1.46
CHD8-212ENST00000557329 GSNP06396 782 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 UNC5AQ6ZN44 842 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 TMEM192Q8IY95 271 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 ANKS4BQ8N8V4 417 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 LRRN4CLQ8ND94 238 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 PDZD8Q8NEN9 1154 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 HDAC8Q9BY41 377 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 ZNF214Q9UL59 606 aaPredicted RBP5.95□□□□□ -1.46
CHD8-212ENST00000557329 CTNND2Q9UQB3 1225 aa5.95□□□□□ -1.46
CHD8-212ENST00000557329 PLEKHD1A6NEE1 506 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms