RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 JPH1Q9HDC5 661 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-247ENST00000557311 MYOZ2Q9NPC6 264 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 SLC6A14Q9UN76 642 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 TRIM17Q9Y577 477 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 BCORQ6W2J9 1755 aa6.3□□□□□ -1.4
ATXN3-247ENST00000557311 ZBTB39O15060 712 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 HSP90B1P14625 803 aaKnown RBP6.29□□□□□ -1.4
ATXN3-247ENST00000557311 EIF2AK2P19525 551 aaKnown RBP6.29□□□□□ -1.4
ATXN3-247ENST00000557311 EN2P19622 333 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-247ENST00000557311 MPSTP25325 297 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 MMP14P50281 582 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 PTPN12Q05209 780 aaKnown RBP6.29□□□□□ -1.4
ATXN3-247ENST00000557311 ZNF211Q13398 564 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-247ENST00000557311 PROSER3Q2NL68 480 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 LDLRAD1Q5T700 205 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 TTC39BQ5VTQ0 682 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-247ENST00000557311 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 ELMSAN1Q6PJG2 1045 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 OTOP1Q7RTM1 612 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 XAGE3Q8WTP9 111 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 ARMC5Q96C12 935 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 FAM89AQ96GI7 184 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 PCGF6Q9BYE7 350 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 RBSNQ9H1K0 784 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 PNNQ9H307 717 aaKnown RBP6.29□□□□□ -1.4
ATXN3-247ENST00000557311 BABAM1Q9NWV8 329 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 NOP53Q9NZM5 478 aaKnown RBP6.29□□□□□ -1.4
ATXN3-247ENST00000557311 PTPN22Q9Y2R2 807 aa6.29□□□□□ -1.4
ATXN3-247ENST00000557311 TNRC18O15417 2968 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-247ENST00000557311 MANSC4A6NHS7 340 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-247ENST00000557311 SPDYE3A6NKU9 549 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 DLL1O00548 723 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 LILRB5O75023 590 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 RGS9O75916 674 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-247ENST00000557311 UFL1O94874 794 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 ALBP02768 609 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 ANXA1P04083 346 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 CDK11BP21127 795 aaKnown RBP6.28□□□□□ -1.4
ATXN3-247ENST00000557311 GRNP28799 593 aaKnown RBP6.28□□□□□ -1.4
ATXN3-247ENST00000557311 PPP2R1AP30153 589 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 TRIM28Q13263 835 aaKnown RBP6.28□□□□□ -1.4
ATXN3-247ENST00000557311 NFE2L2Q16236 605 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 NBPF9Q3BBW0 867 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 FAM26DQ5JW98 314 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 PSAPL1Q6NUJ1 521 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 C8orf86Q6ZUL3 223 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 EDEM1Q92611 657 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 ERO1AQ96HE7 468 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 NSUN5Q96P11 429 aaKnown RBP6.28□□□□□ -1.4
ATXN3-247ENST00000557311 ISCA1Q9BUE6 129 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 PLVAPQ9BX97 442 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 ZFATQ9P243 1243 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 TSPYL4Q9UJ04 414 aa6.28□□□□□ -1.4
ATXN3-247ENST00000557311 UNCXA6NJT0 531 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 WNT10BO00744 389 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 IRS4O14654 1257 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-247ENST00000557311 GHRHP01286 108 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 PLAURQ03405 335 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 ARHGEF6Q15052 776 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 PRRT3Q5FWE3 981 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 OTUD7BQ6GQQ9 843 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 ALKBH2Q6NS38 261 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 ZNF438Q7Z4V0 828 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 NBPF11Q86T75 865 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 PLBD2Q8NHP8 589 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 TRIM11Q96F44 468 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 CCDC136Q96JN2 1154 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 PLEKHF1Q96S99 279 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 SCAF8Q9UPN6 1271 aaKnown RBP6.27□□□□□ -1.41
ATXN3-247ENST00000557311 KCNMB2Q9Y691 235 aa6.27□□□□□ -1.41
ATXN3-247ENST00000557311 SIPA1L3O60292 1781 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-247ENST00000557311 ZNF609O15014 1411 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 H0YGN5 161 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 MMP20O60882 483 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 FAM13AO94988 1023 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 MAP3K6O95382 1288 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 ZBTB48P10074 688 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-247ENST00000557311 EIF1AXP47813 144 aaKnown RBP6.26□□□□□ -1.41
ATXN3-247ENST00000557311 SP3Q02447 781 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 PRKG1Q13976 671 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 DOC2BQ14184 412 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 TRIP4Q15650 581 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-247ENST00000557311 APOBEC3FQ8IUX4 373 aaKnown RBP6.26□□□□□ -1.41
ATXN3-247ENST00000557311 GLYCTKQ8IVS8 523 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 SLC17A8Q8NDX2 589 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 ZNF428Q96B54 188 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 SPACA7Q96KW9 195 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 C11orf16Q9NQ32 467 aa6.26□□□□□ -1.41
ATXN3-247ENST00000557311 TLR7Q9NYK1 1049 aaKnown RBP6.26□□□□□ -1.41
ATXN3-247ENST00000557311 ANGEL1Q9UNK9 670 aaKnown RBP6.26□□□□□ -1.41
ATXN3-247ENST00000557311 MYO3BQ8WXR4 1341 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 J3QW42 95 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 RPLP1P05386 114 aaKnown RBP6.25□□□□□ -1.41
ATXN3-247ENST00000557311 MAP3K11Q16584 847 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 SLC4A8Q2Y0W8 1093 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 CCDC152Q4G0S7 254 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 DACT2Q5SW24 774 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 STRIP1Q5VSL9 837 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 ZBTB38Q8NAP3 1195 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-247ENST00000557311 CD99L2Q8TCZ2 262 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms