RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 CNOT11Q9UKZ1 510 aaKnown RBP3.62□□□□□ -1.83
PTPN21-209ENST00000557249 CDK11AQ9UQ88 783 aaPredicted RBP3.62□□□□□ -1.83
PTPN21-209ENST00000557249 GNEQ9Y223 722 aaKnown RBP3.62□□□□□ -1.83
PTPN21-209ENST00000557249 ZNF281Q9Y2X9 895 aa3.62□□□□□ -1.83
PTPN21-209ENST00000557249 A0A1W2PQ27 194 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 A0A1W2PQ64 194 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 A0A1W2PQC6 194 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 A0A1W2PQD8 194 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 NUDT19A8MXV4 375 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 HMGB1P09429 215 aaKnown RBP3.61□□□□□ -1.83
PTPN21-209ENST00000557249 ENDOUP21128 410 aaKnown RBP3.61□□□□□ -1.83
PTPN21-209ENST00000557249 CYP4F8P98187 520 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 HHIPL2Q6UWX4 724 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 CCDC84Q86UT8 332 aaPredicted RBP3.61□□□□□ -1.83
PTPN21-209ENST00000557249 LINC00116Q8NCU8 138 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 KIF2CQ99661 725 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 HDAC8Q9BY41 377 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 KLHL14Q9P2G3 628 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 REV1Q9UBZ9 1251 aa3.61□□□□□ -1.83
PTPN21-209ENST00000557249 A0A1W2PQJ5 194 aa3.6□□□□□ -1.83
PTPN21-209ENST00000557249 CHURC1-FNTBB4DL54 471 aa3.6□□□□□ -1.83
PTPN21-209ENST00000557249 PRICKLE3O43900 615 aaPredicted RBP3.6□□□□□ -1.83
PTPN21-209ENST00000557249 HSP90B1P14625 803 aaKnown RBP3.6□□□□□ -1.83
PTPN21-209ENST00000557249 PRKCAP17252 672 aa3.6□□□□□ -1.83
PTPN21-209ENST00000557249 SLURP1P55000 103 aa3.6□□□□□ -1.83
PTPN21-209ENST00000557249 NCKAP1LP55160 1127 aa3.6□□□□□ -1.83
PTPN21-209ENST00000557249 TARBP2Q15633 366 aaKnown RBP3.6□□□□□ -1.83
PTPN21-209ENST00000557249 NUP43Q8NFH3 380 aa3.6□□□□□ -1.83
PTPN21-209ENST00000557249 EAF1Q96JC9 268 aaPredicted RBP3.6□□□□□ -1.83
PTPN21-209ENST00000557249 FCRL2Q96LA5 508 aaPredicted RBP3.6□□□□□ -1.83
PTPN21-209ENST00000557249 PLCD4Q9BRC7 762 aa3.6□□□□□ -1.83
PTPN21-209ENST00000557249 TLR6Q9Y2C9 796 aa3.6□□□□□ -1.83
PTPN21-209ENST00000557249 AK5Q9Y6K8 562 aa3.6□□□□□ -1.83
PTPN21-209ENST00000557249 TMEM82A0PJX8 343 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 SUV39H1O43463 412 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 GRIN3BO60391 1043 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 PRPF40AO75400 957 aaKnown RBP3.59□□□□□ -1.83
PTPN21-209ENST00000557249 EFEMP2O95967 443 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 P4HBP07237 508 aaKnown RBP3.59□□□□□ -1.83
PTPN21-209ENST00000557249 ZXDAP98168 799 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 NR1I3Q14994 352 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 HSF5Q4G112 596 aaPredicted RBP3.59□□□□□ -1.83
PTPN21-209ENST00000557249 ZFYVE27Q5T4F4 411 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 ZC3H14Q6PJT7 736 aaKnown RBP3.59□□□□□ -1.83
PTPN21-209ENST00000557249 BNC2Q6ZN30 1099 aaPredicted RBP3.59□□□□□ -1.83
PTPN21-209ENST00000557249 LSRQ86X29 649 aaPredicted RBP3.59□□□□□ -1.83
PTPN21-209ENST00000557249 PUS7Q96PZ0 661 aaKnown RBP3.59□□□□□ -1.83
PTPN21-209ENST00000557249 USP35Q9P2H5 1018 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 SRRDQ9UH36 339 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 FAN1Q9Y2M0 1017 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 GPR55Q9Y2T6 319 aaPredicted RBP3.59□□□□□ -1.83
PTPN21-209ENST00000557249 PCDHA5Q9Y5H7 936 aa3.59□□□□□ -1.83
PTPN21-209ENST00000557249 A0A1W2PQ45 241 aaPredicted RBP3.58□□□□□ -1.84
PTPN21-209ENST00000557249 A0A1W2PQY0 241 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 FADS2P1A8MWK0 482 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 RGS13O14921 159 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 AKAP8O43823 692 aaKnown RBP3.58□□□□□ -1.84
PTPN21-209ENST00000557249 HTR3BO95264 441 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 BRD1O95696 1058 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 RAG1P15918 1043 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 MAGEA10P43363 369 aaPredicted RBP3.58□□□□□ -1.84
PTPN21-209ENST00000557249 LIMS1P48059 325 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 CAP1Q01518 475 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 NT5DC1Q5TFE4 455 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 ZPBP2Q6X784 338 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 TMC3Q7Z5M5 1100 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 FERMT3Q86UX7 667 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 TP53I13Q8NBR0 393 aaPredicted RBP3.58□□□□□ -1.84
PTPN21-209ENST00000557249 PHC3Q8NDX5 983 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 GATAD2BQ8WXI9 593 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 NOC4LQ9BVI4 516 aaKnown RBP3.58□□□□□ -1.84
PTPN21-209ENST00000557249 CDADC1Q9BWV3 514 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.58□□□□□ -1.84
PTPN21-209ENST00000557249 SUSD2Q9UGT4 822 aa3.58□□□□□ -1.84
PTPN21-209ENST00000557249 FFAR3O14843 346 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 PRAMEF1O95521 474 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 MAPKAPK2P49137 400 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 ZNF200P98182 395 aaPredicted RBP3.57□□□□□ -1.84
PTPN21-209ENST00000557249 LMNB2Q03252 620 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 RAD51AP2Q09MP3 1159 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 CAMK2GQ13555 558 aaPredicted RBP3.57□□□□□ -1.84
PTPN21-209ENST00000557249 CBX2Q14781 532 aaPredicted RBP3.57□□□□□ -1.84
PTPN21-209ENST00000557249 KIR3DS1Q14943 382 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 TAF1CQ15572 869 aaPredicted RBP3.57□□□□□ -1.84
PTPN21-209ENST00000557249 NBPF9Q3BBW0 867 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 BBS9Q3SYG4 887 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 MEI1Q5TIA1 1274 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 RPTNQ6XPR3 784 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 RELL1Q8IUW5 271 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 VWCEQ96DN2 955 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 CRELD1Q96HD1 420 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 PRR36Q9H6K5 1346 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 CHST7Q9NS84 486 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 SMPD4Q9NXE4 827 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 PMF1-BGLAPU3KQ54 211 aa3.57□□□□□ -1.84
PTPN21-209ENST00000557249 FAM221AA4D161 298 aa3.56□□□□□ -1.84
PTPN21-209ENST00000557249 SIGLEC6O43699 453 aa3.56□□□□□ -1.84
PTPN21-209ENST00000557249 F13A1P00488 732 aa3.56□□□□□ -1.84
PTPN21-209ENST00000557249 FSHBP01225 129 aa3.56□□□□□ -1.84
PTPN21-209ENST00000557249 PF4P02776 101 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms