RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 USP17L19D6RCP7 530 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 USP17L20D6RJB6 530 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 ZKSCAN1P17029 563 aaPredicted RBP10.55□□□□□ -0.72
VRK1-206ENST00000557222 CYP2B6P20813 491 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 ZAP70P43403 619 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 CCNA1P78396 465 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 JAG1P78504 1218 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 USP17L24Q0WX57 530 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 CSPP1Q1MSJ5 1256 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 LRIT3Q3SXY7 679 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 LBX2Q6XYB7 198 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 PLEKHH3Q7Z736 793 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 ADGRA1Q86SQ6 560 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 TTC6Q86TZ1 520 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 CCAR1Q8IX12 1150 aaKnown RBP10.55□□□□□ -0.72
VRK1-206ENST00000557222 TMEM57Q8N5G2 664 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 CLUAP1Q96AJ1 413 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 TXNRD2Q9NNW7 524 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 LIMD1Q9UGP4 676 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 SIPA1L1O43166 1804 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 MAST2Q6P0Q8 1798 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 PLXNB2O15031 1838 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 FOCADQ5VW36 1801 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 CFAP99D6REC4 459 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 GDF11O95390 407 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 COL6A1P12109 1028 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 CYP7A1P22680 504 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 CACNB2Q08289 660 aaPredicted RBP10.54□□□□□ -0.72
VRK1-206ENST00000557222 MAP3K12Q12852 859 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 GPR142Q7Z601 462 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 ERC1Q8IUD2 1116 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 C7orf61Q8IZ16 206 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 APBA2Q99767 749 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 KIAA1683Q9H0B3 1180 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 PIH1D3Q9NQM4 214 aaKnown RBP10.54□□□□□ -0.72
VRK1-206ENST00000557222 EVA1BQ9NVM1 165 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 SERPINB13Q9UIV8 391 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 DBNLQ9UJU6 430 aaKnown RBP10.54□□□□□ -0.72
VRK1-206ENST00000557222 ALPK3Q96L96 1907 aa10.54□□□□□ -0.72
VRK1-206ENST00000557222 SLC15A5A6NIM6 579 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 SOX1O00570 391 aaPredicted RBP10.53□□□□□ -0.72
VRK1-206ENST00000557222 MSCO60682 206 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 GH2P01242 217 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 HOXC6P09630 235 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 USP5P45974 858 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 WNT7BP56706 349 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 CATSPERGQ6ZRH7 1159 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 EDC3Q96F86 508 aaKnown RBP10.53□□□□□ -0.72
VRK1-206ENST00000557222 MRGPRX2Q96LB1 330 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 PORCNQ9H237 461 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 CABP5Q9NP86 173 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 TNNQ9UQP3 1299 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
VRK1-206ENST00000557222 LAMA2P24043 3122 aaKnown RBP10.52□□□□□ -0.72
VRK1-206ENST00000557222 TTC24A2A3L6 582 aaPredicted RBP10.52□□□□□ -0.73
VRK1-206ENST00000557222 IDH1O75874 414 aaKnown RBP10.52□□□□□ -0.73
VRK1-206ENST00000557222 DYNLL1P63167 89 aaKnown RBP10.52□□□□□ -0.73
VRK1-206ENST00000557222 TTF1Q15361 905 aaPredicted RBP10.52□□□□□ -0.73
VRK1-206ENST00000557222 TUSC1Q2TAM9 212 aa10.52□□□□□ -0.73
VRK1-206ENST00000557222 CERKLQ49MI3 558 aaPredicted RBP10.52□□□□□ -0.73
VRK1-206ENST00000557222 HSP90AB4PQ58FF6 505 aa10.52□□□□□ -0.73
VRK1-206ENST00000557222 MFSD14CQ5VZR4 134 aa10.52□□□□□ -0.73
VRK1-206ENST00000557222 FTSJ3Q8IY81 847 aaKnown RBP10.52□□□□□ -0.73
VRK1-206ENST00000557222 TDHQ8IZJ6 230 aa10.52□□□□□ -0.73
VRK1-206ENST00000557222 SLC17A8Q8NDX2 589 aa10.52□□□□□ -0.73
VRK1-206ENST00000557222 EAF2Q96CJ1 260 aaPredicted RBP10.52□□□□□ -0.73
VRK1-206ENST00000557222 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.73
VRK1-206ENST00000557222 SAP30BPQ9UHR5 308 aaKnown RBP10.52□□□□□ -0.73
VRK1-206ENST00000557222 PFASO15067 1338 aa10.52□□□□□ -0.73
VRK1-206ENST00000557222 DDX60LQ5H9U9 1706 aaKnown RBP10.51□□□□□ -0.73
VRK1-206ENST00000557222 STRNO43815 780 aa10.51□□□□□ -0.73
VRK1-206ENST00000557222 CNMDO75829 334 aa10.51□□□□□ -0.73
VRK1-206ENST00000557222 MAGEA10P43363 369 aaPredicted RBP10.51□□□□□ -0.73
VRK1-206ENST00000557222 KCNH2Q12809 1159 aa10.51□□□□□ -0.73
VRK1-206ENST00000557222 QPCTQ16769 361 aa10.51□□□□□ -0.73
VRK1-206ENST00000557222 ABCB5Q2M3G0 1257 aa10.51□□□□□ -0.73
VRK1-206ENST00000557222 SHROOM1Q2M3G4 852 aaPredicted RBP10.51□□□□□ -0.73
VRK1-206ENST00000557222 LYPD8Q6UX82 237 aa10.51□□□□□ -0.73
VRK1-206ENST00000557222 MAGEB6Q8N7X4 407 aa10.51□□□□□ -0.73
VRK1-206ENST00000557222 SNIP1Q8TAD8 396 aaKnown RBP10.51□□□□□ -0.73
VRK1-206ENST00000557222 FEZ1Q99689 392 aa10.51□□□□□ -0.73
VRK1-206ENST00000557222 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
VRK1-206ENST00000557222 CCDC8Q9H0W5 538 aaPredicted RBP10.51□□□□□ -0.73
VRK1-206ENST00000557222 HOXC10Q9NYD6 342 aa10.51□□□□□ -0.73
VRK1-206ENST00000557222 ZMYND8Q9ULU4 1186 aaPredicted RBP10.51□□□□□ -0.73
VRK1-206ENST00000557222 MYH1P12882 1939 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 IGHA2P01877 340 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 VCAM1P19320 739 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 CCND3P30281 292 aaPredicted RBP10.5□□□□□ -0.73
VRK1-206ENST00000557222 GABPAQ06546 454 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 GRB14Q14449 540 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 RAB3GAP1Q15042 981 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 CCL14Q16627 93 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 MIGA1Q8NAN2 632 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.5□□□□□ -0.73
VRK1-206ENST00000557222 LPAR1Q92633 364 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 RIOK1Q9BRS2 568 aaKnown RBP10.5□□□□□ -0.73
VRK1-206ENST00000557222 UBE2OQ9C0C9 1292 aaKnown RBP10.5□□□□□ -0.73
VRK1-206ENST00000557222 KDM4CQ9H3R0 1056 aa10.5□□□□□ -0.73
VRK1-206ENST00000557222 TLR7Q9NYK1 1049 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms