RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 GNAT2P19087 354 aa17.24■□□□□ 0.35
VRTN-202ENST00000557177 SHHQ15465 462 aa17.24■□□□□ 0.35
VRTN-202ENST00000557177 C9orf50Q5SZB4 431 aa17.24■□□□□ 0.35
VRTN-202ENST00000557177 SNRNP48Q6IEG0 339 aaKnown RBP17.24■□□□□ 0.35
VRTN-202ENST00000557177 RNF180Q86T96 592 aa17.24■□□□□ 0.35
VRTN-202ENST00000557177 STK11IPQ8N1F8 1099 aa17.24■□□□□ 0.35
VRTN-202ENST00000557177 MSL3Q8N5Y2 521 aaKnown RBP17.24■□□□□ 0.35
VRTN-202ENST00000557177 PRPF38AQ8NAV1 312 aaKnown RBP17.24■□□□□ 0.35
VRTN-202ENST00000557177 BADQ92934 168 aa17.24■□□□□ 0.35
VRTN-202ENST00000557177 MKL1Q969V6 931 aa17.24■□□□□ 0.35
VRTN-202ENST00000557177 RIPK3Q9Y572 518 aa17.24■□□□□ 0.35
VRTN-202ENST00000557177 VCANP13611 3396 aa17.23■□□□□ 0.35
VRTN-202ENST00000557177 SYNGAP1Q96PV0 1343 aa17.23■□□□□ 0.35
VRTN-202ENST00000557177 DNAJC25-GNG10A0A024R161 153 aa17.23■□□□□ 0.35
VRTN-202ENST00000557177 M0R2C6 588 aa17.23■□□□□ 0.35
VRTN-202ENST00000557177 ADAMTS4O75173 837 aa17.23■□□□□ 0.35
VRTN-202ENST00000557177 TLE2Q04725 743 aa17.23■□□□□ 0.35
VRTN-202ENST00000557177 MAMDC4Q6UXC1 1216 aa17.23■□□□□ 0.35
VRTN-202ENST00000557177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.23■□□□□ 0.35
VRTN-202ENST00000557177 LENG1Q96BZ8 264 aaPredicted RBP17.23■□□□□ 0.35
VRTN-202ENST00000557177 CLIP2Q9UDT6 1046 aa17.23■□□□□ 0.35
VRTN-202ENST00000557177 SYNPO2Q9UMS6 1093 aa17.23■□□□□ 0.35
VRTN-202ENST00000557177 PLIN4Q96Q06 1357 aa17.23■□□□□ 0.35
VRTN-202ENST00000557177 A0A1W2PQ45 241 aaPredicted RBP17.22■□□□□ 0.35
VRTN-202ENST00000557177 A0A1W2PQY0 241 aa17.22■□□□□ 0.35
VRTN-202ENST00000557177 TDO2P48775 406 aa17.22■□□□□ 0.35
VRTN-202ENST00000557177 CEP95Q96GE4 821 aa17.22■□□□□ 0.35
VRTN-202ENST00000557177 SLC38A10Q9HBR0 1119 aa17.22■□□□□ 0.35
VRTN-202ENST00000557177 MTMR4Q9NYA4 1195 aa17.22■□□□□ 0.35
VRTN-202ENST00000557177 CNPY2Q9Y2B0 182 aa17.22■□□□□ 0.35
VRTN-202ENST00000557177 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
VRTN-202ENST00000557177 PRDM1O75626 825 aa17.21■□□□□ 0.35
VRTN-202ENST00000557177 SNAI1O95863 264 aaPredicted RBP17.21■□□□□ 0.35
VRTN-202ENST00000557177 CLTBP09497 229 aa17.21■□□□□ 0.35
VRTN-202ENST00000557177 ITGB8P26012 769 aa17.21■□□□□ 0.35
VRTN-202ENST00000557177 ZNF467Q7Z7K2 595 aaPredicted RBP17.21■□□□□ 0.35
VRTN-202ENST00000557177 IFNL3Q8IZI9 196 aa17.21■□□□□ 0.35
VRTN-202ENST00000557177 GMCL1P1Q8NEA9 526 aa17.21■□□□□ 0.35
VRTN-202ENST00000557177 TSEN34Q9BSV6 310 aaKnown RBP17.21■□□□□ 0.35
VRTN-202ENST00000557177 ZNF287Q9HBT7 754 aa17.21■□□□□ 0.35
VRTN-202ENST00000557177 TACC3Q9Y6A5 838 aa17.21■□□□□ 0.35
VRTN-202ENST00000557177 PRUNE2Q8WUY3 3088 aa17.21■□□□□ 0.35
VRTN-202ENST00000557177 TTC41PQ6P2S7 1318 aa17.21■□□□□ 0.34
VRTN-202ENST00000557177 SYNRGQ9UMZ2 1314 aa17.21■□□□□ 0.34
VRTN-202ENST00000557177 ZBED4O75132 1171 aa17.2■□□□□ 0.34
VRTN-202ENST00000557177 TTLL1O95922 423 aa17.2■□□□□ 0.34
VRTN-202ENST00000557177 ZNF697Q5TEC3 545 aa17.2■□□□□ 0.34
VRTN-202ENST00000557177 CCSAPQ6IQ19 270 aaPredicted RBP17.2■□□□□ 0.34
VRTN-202ENST00000557177 ZNF444Q8N0Y2 327 aaPredicted RBP17.2■□□□□ 0.34
VRTN-202ENST00000557177 KLHDC9Q8NEP7 349 aa17.2■□□□□ 0.34
VRTN-202ENST00000557177 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
VRTN-202ENST00000557177 DDX11Q96FC9 970 aa17.2■□□□□ 0.34
VRTN-202ENST00000557177 FAM161BQ96MY7 647 aa17.2■□□□□ 0.34
VRTN-202ENST00000557177 FEM1BQ9UK73 627 aa17.2■□□□□ 0.34
VRTN-202ENST00000557177 MCM3APO60318 1980 aa17.2■□□□□ 0.34
VRTN-202ENST00000557177 SPTBN5Q9NRC6 3674 aaKnown RBP17.19■□□□□ 0.34
VRTN-202ENST00000557177 KIAA0355O15063 1070 aa17.19■□□□□ 0.34
VRTN-202ENST00000557177 APPP05067 770 aa17.19■□□□□ 0.34
VRTN-202ENST00000557177 ACLYP53396 1101 aa17.19■□□□□ 0.34
VRTN-202ENST00000557177 OAZ1P54368 228 aa17.19■□□□□ 0.34
VRTN-202ENST00000557177 SMAD3P84022 425 aaKnown RBP17.19■□□□□ 0.34
VRTN-202ENST00000557177 LRRFIP1Q32MZ4 808 aaKnown RBP17.19■□□□□ 0.34
VRTN-202ENST00000557177 ANKRD33Q7Z3H0 272 aa17.19■□□□□ 0.34
VRTN-202ENST00000557177 CPXCR1Q8N123 301 aa17.19■□□□□ 0.34
VRTN-202ENST00000557177 KIFC2Q96AC6 838 aa17.19■□□□□ 0.34
VRTN-202ENST00000557177 FGD4Q96M96 766 aa17.19■□□□□ 0.34
VRTN-202ENST00000557177 TOX2Q96NM4 488 aa17.19■□□□□ 0.34
VRTN-202ENST00000557177 SEC62Q99442 399 aaKnown RBP17.19■□□□□ 0.34
VRTN-202ENST00000557177 RAVER2Q9HCJ3 691 aaKnown RBP17.19■□□□□ 0.34
VRTN-202ENST00000557177 FAM184BQ9ULE4 1060 aa17.19■□□□□ 0.34
VRTN-202ENST00000557177 MOXD2PA6NHM9 499 aa17.18■□□□□ 0.34
VRTN-202ENST00000557177 PQBP1O60828 265 aaKnown RBP17.18■□□□□ 0.34
VRTN-202ENST00000557177 DUSP11O75319 330 aaKnown RBP17.18■□□□□ 0.34
VRTN-202ENST00000557177 LRRC47Q8N1G4 583 aaKnown RBP17.18■□□□□ 0.34
VRTN-202ENST00000557177 CHST13Q8NET6 341 aa17.18■□□□□ 0.34
VRTN-202ENST00000557177 NEDD1Q8NHV4 660 aa17.18■□□□□ 0.34
VRTN-202ENST00000557177 FBXO40Q9UH90 709 aa17.18■□□□□ 0.34
VRTN-202ENST00000557177 ZHX1Q9UKY1 873 aaPredicted RBP17.18■□□□□ 0.34
VRTN-202ENST00000557177 ADCY6O43306 1168 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 BMP3P12645 472 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
VRTN-202ENST00000557177 EPHB4P54760 987 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 FAAP100Q0VG06 881 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 ACVR2BQ13705 512 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 KCNA10Q16322 511 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 SLFN13Q68D06 897 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 NUP133Q8WUM0 1156 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 NACAP1Q9BZK3 213 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 SEMA6BQ9H3T3 888 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 STARD7Q9NQZ5 370 aa17.17■□□□□ 0.34
VRTN-202ENST00000557177 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.17■□□□□ 0.34
VRTN-202ENST00000557177 MYADML2A6NDP7 307 aa17.16■□□□□ 0.34
VRTN-202ENST00000557177 ERC2O15083 957 aa17.16■□□□□ 0.34
VRTN-202ENST00000557177 TSPY3P0CV98 308 aa17.16■□□□□ 0.34
VRTN-202ENST00000557177 TSPY8P0CW00 308 aa17.16■□□□□ 0.34
VRTN-202ENST00000557177 RAG1P15918 1043 aa17.16■□□□□ 0.34
VRTN-202ENST00000557177 SLC4A3P48751 1232 aa17.16■□□□□ 0.34
VRTN-202ENST00000557177 PDE4BQ07343 736 aa17.16■□□□□ 0.34
VRTN-202ENST00000557177 ZMYM1Q5SVZ6 1142 aa17.16■□□□□ 0.34
VRTN-202ENST00000557177 ANKRD35Q8N283 1001 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms