RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 HFE2Q6ZVN8 426 aa15.36■□□□□ 0.05
PSEN1-220ENST00000557037 RPUSD2Q8IZ73 545 aaKnown RBP15.36■□□□□ 0.05
PSEN1-220ENST00000557037 NOC4LQ9BVI4 516 aaKnown RBP15.36■□□□□ 0.05
PSEN1-220ENST00000557037 UBE2ZQ9H832 354 aaPredicted RBP15.36■□□□□ 0.05
PSEN1-220ENST00000557037 CACNA1HO95180 2353 aa15.36■□□□□ 0.05
PSEN1-220ENST00000557037 ADCY6O43306 1168 aa15.35■□□□□ 0.05
PSEN1-220ENST00000557037 SNAI1O95863 264 aaPredicted RBP15.35■□□□□ 0.05
PSEN1-220ENST00000557037 MCAMP43121 646 aa15.35■□□□□ 0.05
PSEN1-220ENST00000557037 FOXK2Q01167 660 aa15.35■□□□□ 0.05
PSEN1-220ENST00000557037 WDR63Q8IWG1 891 aa15.35■□□□□ 0.05
PSEN1-220ENST00000557037 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.35■□□□□ 0.05
PSEN1-220ENST00000557037 TRPV6Q9H1D0 765 aa15.35■□□□□ 0.05
PSEN1-220ENST00000557037 PRKRIP1Q9H875 184 aaPredicted RBP15.35■□□□□ 0.05
PSEN1-220ENST00000557037 SNRKQ9NRH2 765 aa15.35■□□□□ 0.05
PSEN1-220ENST00000557037 DIS3Q9Y2L1 958 aaKnown RBP15.35■□□□□ 0.05
PSEN1-220ENST00000557037 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.35■□□□□ 0.05
PSEN1-220ENST00000557037 FOCADQ5VW36 1801 aa15.35■□□□□ 0.05
PSEN1-220ENST00000557037 RIF1Q5UIP0 2472 aaKnown RBP15.34■□□□□ 0.05
PSEN1-220ENST00000557037 SLC25A27O95847 323 aa15.34■□□□□ 0.05
PSEN1-220ENST00000557037 KCNA5P22460 613 aa15.34■□□□□ 0.05
PSEN1-220ENST00000557037 BEX3Q00994 111 aa15.34■□□□□ 0.05
PSEN1-220ENST00000557037 SPICE1Q8N0Z3 855 aa15.34■□□□□ 0.05
PSEN1-220ENST00000557037 SPC25Q9HBM1 224 aa15.34■□□□□ 0.05
PSEN1-220ENST00000557037 SERPINB13Q9UIV8 391 aa15.34■□□□□ 0.05
PSEN1-220ENST00000557037 AKAP2Q9Y2D5 859 aa15.34■□□□□ 0.05
PSEN1-220ENST00000557037 CACNA1BQ00975 2339 aa15.34■□□□□ 0.05
PSEN1-220ENST00000557037 MYH1P12882 1939 aa15.33■□□□□ 0.05
PSEN1-220ENST00000557037 SHMT1P34896 483 aa15.33■□□□□ 0.04
PSEN1-220ENST00000557037 LEXMQ3ZCV2 418 aa15.33■□□□□ 0.04
PSEN1-220ENST00000557037 PTCRAQ6ISU1 281 aaPredicted RBP15.33■□□□□ 0.04
PSEN1-220ENST00000557037 DEFB128Q7Z7B8 93 aa15.33■□□□□ 0.04
PSEN1-220ENST00000557037 MRPL50Q8N5N7 158 aaKnown RBP15.33■□□□□ 0.04
PSEN1-220ENST00000557037 PRSS33Q8NF86 280 aa15.33■□□□□ 0.04
PSEN1-220ENST00000557037 GDPD5Q8WTR4 605 aa15.33■□□□□ 0.04
PSEN1-220ENST00000557037 COPRSQ9NQ92 184 aa15.33■□□□□ 0.04
PSEN1-220ENST00000557037 POTEB3A0JP26 581 aa15.32■□□□□ 0.04
PSEN1-220ENST00000557037 MPHOSPH10O00566 681 aaKnown RBP15.32■□□□□ 0.04
PSEN1-220ENST00000557037 UBTFL1P0CB47 393 aaPredicted RBP15.32■□□□□ 0.04
PSEN1-220ENST00000557037 ARID4AP29374 1257 aaPredicted RBP15.32■□□□□ 0.04
PSEN1-220ENST00000557037 GJA9P57773 515 aa15.32■□□□□ 0.04
PSEN1-220ENST00000557037 POTEBQ6S5H4 581 aa15.32■□□□□ 0.04
PSEN1-220ENST00000557037 CXCL17Q6UXB2 119 aa15.32■□□□□ 0.04
PSEN1-220ENST00000557037 UPF3AQ9H1J1 476 aaKnown RBP15.32■□□□□ 0.04
PSEN1-220ENST00000557037 USP34Q70CQ2 3546 aa15.32■□□□□ 0.04
PSEN1-220ENST00000557037 TRIOO75962 3097 aa15.32■□□□□ 0.04
PSEN1-220ENST00000557037 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.31■□□□□ 0.04
PSEN1-220ENST00000557037 CTAGE5O15320 804 aa15.31■□□□□ 0.04
PSEN1-220ENST00000557037 USP5P45974 858 aa15.31■□□□□ 0.04
PSEN1-220ENST00000557037 CCDC144BQ3MJ40 725 aa15.31■□□□□ 0.04
PSEN1-220ENST00000557037 RIOX2Q8IUF8 465 aa15.31■□□□□ 0.04
PSEN1-220ENST00000557037 MFSD14AQ96MC6 490 aa15.31■□□□□ 0.04
PSEN1-220ENST00000557037 EHD4Q9H223 541 aa15.31■□□□□ 0.04
PSEN1-220ENST00000557037 COL4A4P53420 1690 aaPredicted RBP15.31■□□□□ 0.04
PSEN1-220ENST00000557037 ZNF536O15090 1300 aa15.3■□□□□ 0.04
PSEN1-220ENST00000557037 GRIN2DO15399 1336 aa15.3■□□□□ 0.04
PSEN1-220ENST00000557037 B4GALT4O60513 344 aa15.3■□□□□ 0.04
PSEN1-220ENST00000557037 COL11A1P12107 1806 aaPredicted RBP15.3■□□□□ 0.04
PSEN1-220ENST00000557037 STAT3P40763 770 aa15.3■□□□□ 0.04
PSEN1-220ENST00000557037 ACVR2BQ13705 512 aa15.3■□□□□ 0.04
PSEN1-220ENST00000557037 HERC6Q8IVU3 1022 aa15.3■□□□□ 0.04
PSEN1-220ENST00000557037 SLC43A3Q8NBI5 491 aa15.3■□□□□ 0.04
PSEN1-220ENST00000557037 AGBL1Q96MI9 1066 aa15.3■□□□□ 0.04
PSEN1-220ENST00000557037 MCM3APO60318 1980 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 GRXCR2A6NFK2 248 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 GFRA3O60609 400 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 PLCD1P51178 756 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 ITGA7Q13683 1181 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 IER5LQ5T953 404 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 CLEC10AQ8IUN9 316 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 MSL3Q8N5Y2 521 aaKnown RBP15.29■□□□□ 0.04
PSEN1-220ENST00000557037 MIGA1Q8NAN2 632 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 SLC9A7Q96T83 725 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 FBXO28Q9NVF7 368 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 MTUS1Q9ULD2 1270 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 SCN5AQ14524 2016 aa15.29■□□□□ 0.04
PSEN1-220ENST00000557037 TECTAO75443 2155 aa15.28■□□□□ 0.04
PSEN1-220ENST00000557037 PTPRCP08575 1304 aa15.28■□□□□ 0.04
PSEN1-220ENST00000557037 LCHNA4D1U4 455 aa15.28■□□□□ 0.04
PSEN1-220ENST00000557037 KIF28PB7ZC32 967 aa15.28■□□□□ 0.04
PSEN1-220ENST00000557037 UQCRFS1P1P0C7P4 283 aa15.28■□□□□ 0.04
PSEN1-220ENST00000557037 CYP7A1P22680 504 aa15.28■□□□□ 0.04
PSEN1-220ENST00000557037 PSMC6P62333 389 aa15.28■□□□□ 0.04
PSEN1-220ENST00000557037 NOL8Q76FK4 1167 aaKnown RBP15.28■□□□□ 0.04
PSEN1-220ENST00000557037 TTC6Q86TZ1 520 aa15.28■□□□□ 0.04
PSEN1-220ENST00000557037 DDX11Q96FC9 970 aa15.28■□□□□ 0.04
PSEN1-220ENST00000557037 FAM86C1Q9NVL1 165 aa15.28■□□□□ 0.04
PSEN1-220ENST00000557037 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.28■□□□□ 0.04
PSEN1-220ENST00000557037 MYO5AQ9Y4I1 1855 aaKnown RBP15.27■□□□□ 0.04
PSEN1-220ENST00000557037 H3BQ06 376 aaPredicted RBP15.27■□□□□ 0.04
PSEN1-220ENST00000557037 CYP2C9P11712 490 aa15.27■□□□□ 0.04
PSEN1-220ENST00000557037 ACTN1P12814 892 aa15.27■□□□□ 0.04
PSEN1-220ENST00000557037 PTPN5P54829 565 aa15.27■□□□□ 0.04
PSEN1-220ENST00000557037 EVX2Q03828 476 aa15.27■□□□□ 0.04
PSEN1-220ENST00000557037 MAMDC4Q6UXC1 1216 aa15.27■□□□□ 0.04
PSEN1-220ENST00000557037 LMCD1Q9NZU5 365 aa15.27■□□□□ 0.04
PSEN1-220ENST00000557037 FAM186AA6NE01 2351 aa15.27■□□□□ 0.03
PSEN1-220ENST00000557037 EPG5Q9HCE0 2579 aa15.27■□□□□ 0.03
PSEN1-220ENST00000557037 ASTN1O14525 1302 aa15.26■□□□□ 0.03
PSEN1-220ENST00000557037 CYP2E1P05181 493 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms