RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 SLC38A10Q9HBR0 1119 aa28.8■■■□□ 2.2
SDR39U1-221ENST00000556707 GJD2Q9UKL4 321 aa28.8■■■□□ 2.2
SDR39U1-221ENST00000556707 ZNF214Q9UL59 606 aaPredicted RBP28.8■■■□□ 2.2
SDR39U1-221ENST00000556707 FRMPD2Q68DX3 1309 aaPredicted RBP28.79■■■□□ 2.2
SDR39U1-221ENST00000556707 HSPA4P34932 840 aa28.79■■■□□ 2.2
SDR39U1-221ENST00000556707 ZNF543Q08ER8 600 aa28.79■■■□□ 2.2
SDR39U1-221ENST00000556707 BTNL9Q6UXG8 535 aa28.79■■■□□ 2.2
SDR39U1-221ENST00000556707 IGDCC4Q8TDY8 1250 aa28.79■■■□□ 2.2
SDR39U1-221ENST00000556707 CWC22Q9HCG8 908 aaKnown RBP28.79■■■□□ 2.2
SDR39U1-221ENST00000556707 CTDP1Q9Y5B0 961 aaPredicted RBP28.79■■■□□ 2.2
SDR39U1-221ENST00000556707 KIAA0100Q14667 2235 aaKnown RBP28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 SMCHD1A6NHR9 2005 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 PRC1O43663 620 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 SLC25A27O95847 323 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 ERCC3P19447 782 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 STAT3P40763 770 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 IRF5Q13568 498 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 KRT32Q14532 448 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 WTAPQ15007 396 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 TMEM67Q5HYA8 995 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 WDR78Q5VTH9 848 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 TTBK2Q6IQ55 1244 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 RIOX2Q8IUF8 465 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 GPCPD1Q9NPB8 672 aa28.78■■■□□ 2.2
SDR39U1-221ENST00000556707 ATP2A1O14983 1001 aa28.77■■■□□ 2.2
SDR39U1-221ENST00000556707 COL9A3Q14050 684 aaPredicted RBP28.77■■■□□ 2.2
SDR39U1-221ENST00000556707 GPATCH4Q5T3I0 446 aaKnown RBP28.77■■■□□ 2.2
SDR39U1-221ENST00000556707 SOCS4Q8WXH5 440 aa28.77■■■□□ 2.2
SDR39U1-221ENST00000556707 NEK1Q96PY6 1258 aa28.77■■■□□ 2.2
SDR39U1-221ENST00000556707 NUDT12Q9BQG2 462 aa28.77■■■□□ 2.2
SDR39U1-221ENST00000556707 TEX13BQ9BXU2 312 aa28.77■■■□□ 2.2
SDR39U1-221ENST00000556707 MROH8Q9H579 483 aa28.77■■■□□ 2.2
SDR39U1-221ENST00000556707 PRR12Q9ULL5 1215 aa28.77■■■□□ 2.2
SDR39U1-221ENST00000556707 SLC9C1Q4G0N8 1177 aa28.76■■■□□ 2.19
SDR39U1-221ENST00000556707 MORN1Q5T089 497 aa28.76■■■□□ 2.19
SDR39U1-221ENST00000556707 NCAPG2Q86XI2 1143 aa28.76■■■□□ 2.19
SDR39U1-221ENST00000556707 TMEM87BQ96K49 555 aa28.76■■■□□ 2.19
SDR39U1-221ENST00000556707 USP26Q9BXU7 913 aa28.76■■■□□ 2.19
SDR39U1-221ENST00000556707 SENP2Q9HC62 589 aa28.76■■■□□ 2.19
SDR39U1-221ENST00000556707 IVNS1ABPQ9Y6Y0 642 aa28.76■■■□□ 2.19
SDR39U1-221ENST00000556707 MYH6P13533 1939 aa28.76■■■□□ 2.19
SDR39U1-221ENST00000556707 CENPFP49454 3210 aa28.76■■■□□ 2.19
SDR39U1-221ENST00000556707 SLC15A5A6NIM6 579 aa28.75■■■□□ 2.19
SDR39U1-221ENST00000556707 PTPREP23469 700 aa28.75■■■□□ 2.19
SDR39U1-221ENST00000556707 COPB2P35606 906 aa28.75■■■□□ 2.19
SDR39U1-221ENST00000556707 SLC16A2P36021 539 aa28.75■■■□□ 2.19
SDR39U1-221ENST00000556707 OAZ1P54368 228 aa28.75■■■□□ 2.19
SDR39U1-221ENST00000556707 ADCK5Q3MIX3 580 aa28.75■■■□□ 2.19
SDR39U1-221ENST00000556707 SYDE2Q5VT97 1194 aa28.75■■■□□ 2.19
SDR39U1-221ENST00000556707 CPXCR1Q8N123 301 aa28.75■■■□□ 2.19
SDR39U1-221ENST00000556707 USP6NLQ92738 828 aa28.75■■■□□ 2.19
SDR39U1-221ENST00000556707 ZNF236Q9UL36 1845 aa28.75■■■□□ 2.19
SDR39U1-221ENST00000556707 BAZ2BQ9UIF8 2168 aaKnown RBP28.74■■■□□ 2.19
SDR39U1-221ENST00000556707 GRK4P32298 578 aa28.74■■■□□ 2.19
SDR39U1-221ENST00000556707 ASPRV1Q53RT3 343 aa28.74■■■□□ 2.19
SDR39U1-221ENST00000556707 SNRNP48Q6IEG0 339 aaKnown RBP28.74■■■□□ 2.19
SDR39U1-221ENST00000556707 ARMC5Q96C12 935 aa28.74■■■□□ 2.19
SDR39U1-221ENST00000556707 LY9Q9HBG7 655 aa28.74■■■□□ 2.19
SDR39U1-221ENST00000556707 RAVER2Q9HCJ3 691 aaKnown RBP28.74■■■□□ 2.19
SDR39U1-221ENST00000556707 SNX14Q9Y5W7 946 aa28.74■■■□□ 2.19
SDR39U1-221ENST00000556707 STRNO43815 780 aa28.73■■■□□ 2.19
SDR39U1-221ENST00000556707 ADCY3O60266 1144 aa28.73■■■□□ 2.19
SDR39U1-221ENST00000556707 PARP1P09874 1014 aaKnown RBP28.73■■■□□ 2.19
SDR39U1-221ENST00000556707 GOLGA8HP0CJ92 632 aa28.73■■■□□ 2.19
SDR39U1-221ENST00000556707 GRB14Q14449 540 aa28.73■■■□□ 2.19
SDR39U1-221ENST00000556707 NBPF11Q86T75 865 aa28.73■■■□□ 2.19
SDR39U1-221ENST00000556707 SLAIN1Q8ND83 568 aa28.73■■■□□ 2.19
SDR39U1-221ENST00000556707 PXYLP1Q8TE99 480 aa28.73■■■□□ 2.19
SDR39U1-221ENST00000556707 WDR19Q8NEZ3 1342 aa28.72■■■□□ 2.19
SDR39U1-221ENST00000556707 SH2B2O14492 632 aaPredicted RBP28.72■■■□□ 2.19
SDR39U1-221ENST00000556707 TMTC2Q8N394 836 aa28.72■■■□□ 2.19
SDR39U1-221ENST00000556707 SH3TC2Q8TF17 1288 aa28.72■■■□□ 2.19
SDR39U1-221ENST00000556707 GPHNQ9NQX3 736 aaPredicted RBP28.72■■■□□ 2.19
SDR39U1-221ENST00000556707 XRCC5P13010 732 aaKnown RBP28.71■■■□□ 2.19
SDR39U1-221ENST00000556707 CYP2B6P20813 491 aa28.71■■■□□ 2.19
SDR39U1-221ENST00000556707 RGS2P41220 211 aa28.71■■■□□ 2.19
SDR39U1-221ENST00000556707 MAP2K5Q13163 448 aa28.71■■■□□ 2.19
SDR39U1-221ENST00000556707 DHX32Q7L7V1 743 aaKnown RBP28.71■■■□□ 2.19
SDR39U1-221ENST00000556707 RANBP17Q9H2T7 1088 aaKnown RBP28.71■■■□□ 2.19
SDR39U1-221ENST00000556707 RIPK3Q9Y572 518 aa28.71■■■□□ 2.19
SDR39U1-221ENST00000556707 ZNF536O15090 1300 aa28.7■■■□□ 2.19
SDR39U1-221ENST00000556707 PLXNA1Q9UIW2 1896 aa28.7■■■□□ 2.19
SDR39U1-221ENST00000556707 HMGB1P09429 215 aaKnown RBP28.7■■■□□ 2.18
SDR39U1-221ENST00000556707 LIFRP42702 1097 aa28.7■■■□□ 2.18
SDR39U1-221ENST00000556707 SNAP25P60880 206 aa28.7■■■□□ 2.18
SDR39U1-221ENST00000556707 EXOSC10Q01780 885 aaKnown RBP28.7■■■□□ 2.18
SDR39U1-221ENST00000556707 CATIPQ7Z7H3 387 aa28.7■■■□□ 2.18
SDR39U1-221ENST00000556707 ABRAQ8N0Z2 381 aa28.7■■■□□ 2.18
SDR39U1-221ENST00000556707 LRRC2Q9BYS8 371 aa28.7■■■□□ 2.18
SDR39U1-221ENST00000556707 CCDC85CA6NKD9 419 aa28.69■■■□□ 2.18
SDR39U1-221ENST00000556707 EIF5BO60841 1220 aaKnown RBP28.69■■■□□ 2.18
SDR39U1-221ENST00000556707 FCER1AP12319 257 aa28.69■■■□□ 2.18
SDR39U1-221ENST00000556707 ELNP15502 786 aa28.69■■■□□ 2.18
SDR39U1-221ENST00000556707 TROAPQ12815 778 aa28.69■■■□□ 2.18
SDR39U1-221ENST00000556707 CCDC174Q6PII3 467 aa28.69■■■□□ 2.18
SDR39U1-221ENST00000556707 ZNF333Q96JL9 665 aa28.69■■■□□ 2.18
SDR39U1-221ENST00000556707 APBA2Q99767 749 aa28.69■■■□□ 2.18
SDR39U1-221ENST00000556707 UBA5Q9GZZ9 404 aa28.69■■■□□ 2.18
SDR39U1-221ENST00000556707 ADORA2AP29274 412 aa28.68■■■□□ 2.18
SDR39U1-221ENST00000556707 SLC4A3P48751 1232 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms