RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 USP17L10C9JJH3 530 aa12.46□□□□□ -0.41
LINC01550-206ENST00000556462 BMP3P12645 472 aa12.46□□□□□ -0.41
LINC01550-206ENST00000556462 NASPP49321 788 aaPredicted RBP12.46□□□□□ -0.41
LINC01550-206ENST00000556462 BTNL9Q6UXG8 535 aa12.46□□□□□ -0.41
LINC01550-206ENST00000556462 FAM177A1Q8N128 213 aaPredicted RBP12.46□□□□□ -0.41
LINC01550-206ENST00000556462 LINC00301Q8NCQ3 95 aa12.46□□□□□ -0.41
LINC01550-206ENST00000556462 ZC3H15Q8WU90 426 aaKnown RBP12.46□□□□□ -0.41
LINC01550-206ENST00000556462 ZKSCAN4Q969J2 545 aaPredicted RBP12.46□□□□□ -0.41
LINC01550-206ENST00000556462 PGBD1Q96JS3 809 aa12.46□□□□□ -0.41
LINC01550-206ENST00000556462 GOPCQ9HD26 462 aa12.46□□□□□ -0.41
LINC01550-206ENST00000556462 PNMA6FA0A0J9YX94 578 aa12.46□□□□□ -0.42
LINC01550-206ENST00000556462 M0R2N6 131 aa12.46□□□□□ -0.42
LINC01550-206ENST00000556462 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.42
LINC01550-206ENST00000556462 CALML3P27482 149 aa12.46□□□□□ -0.42
LINC01550-206ENST00000556462 NOM1Q5C9Z4 860 aaKnown RBP12.46□□□□□ -0.42
LINC01550-206ENST00000556462 SULF1Q8IWU6 871 aa12.46□□□□□ -0.42
LINC01550-206ENST00000556462 WRNIP1Q96S55 665 aa12.46□□□□□ -0.42
LINC01550-206ENST00000556462 ZMYND12Q9H0C1 365 aa12.46□□□□□ -0.42
LINC01550-206ENST00000556462 TAF1DQ9H5J8 278 aaPredicted RBP12.46□□□□□ -0.42
LINC01550-206ENST00000556462 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.42
LINC01550-206ENST00000556462 FAM205CA6NFA0 338 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 TMEM232C9JQI7 657 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 ADM5C9JUS6 153 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 ZBTB5O15062 677 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 USP2O75604 605 aaPredicted RBP12.45□□□□□ -0.42
LINC01550-206ENST00000556462 MBD3O95983 291 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 ANO1Q5XXA6 986 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 KRT26Q7Z3Y9 468 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 SCYL3Q8IZE3 742 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 BLIDQ8IZY5 108 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 CCDC148Q8NFR7 591 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 SH2D4AQ9H788 454 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 BRMS1Q9HCU9 246 aa12.45□□□□□ -0.42
LINC01550-206ENST00000556462 hCG_1984214I3L0E3 225 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 YEATS4O95619 227 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 NAPAP54920 295 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 PTPAQ15257 358 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
LINC01550-206ENST00000556462 ZYXQ15942 572 aaKnown RBP12.44□□□□□ -0.42
LINC01550-206ENST00000556462 RILPL1Q5EBL4 403 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 GALNT17Q6IS24 598 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 ZNF713Q8N859 430 aaPredicted RBP12.44□□□□□ -0.42
LINC01550-206ENST00000556462 DAGLBQ8NCG7 672 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 COA7Q96BR5 231 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 KIAA1683Q9H0B3 1180 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 GZF1Q9H116 711 aaPredicted RBP12.44□□□□□ -0.42
LINC01550-206ENST00000556462 ISY1Q9ULR0 285 aaKnown RBP12.44□□□□□ -0.42
LINC01550-206ENST00000556462 MYH15Q9Y2K3 1946 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 IQCA1LA6NCM1 817 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 PTPRAP18433 802 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 SLC39A14Q15043 492 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 FAM83BQ5T0W9 1011 aa12.44□□□□□ -0.42
LINC01550-206ENST00000556462 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC01550-206ENST00000556462 ESYT2A0FGR8 921 aa12.43□□□□□ -0.42
LINC01550-206ENST00000556462 SMCO2A6NFE2 343 aa12.43□□□□□ -0.42
LINC01550-206ENST00000556462 QRICH1Q2TAL8 776 aa12.43□□□□□ -0.42
LINC01550-206ENST00000556462 TPRNQ4KMQ1 711 aa12.43□□□□□ -0.42
LINC01550-206ENST00000556462 SYDE2Q5VT97 1194 aa12.43□□□□□ -0.42
LINC01550-206ENST00000556462 CAVIN1Q6NZI2 390 aaKnown RBP12.43□□□□□ -0.42
LINC01550-206ENST00000556462 CCDC12Q8WUD4 166 aaPredicted RBP12.43□□□□□ -0.42
LINC01550-206ENST00000556462 WDR18Q9BV38 432 aa12.43□□□□□ -0.42
LINC01550-206ENST00000556462 TMEM63CQ9P1W3 806 aa12.43□□□□□ -0.42
LINC01550-206ENST00000556462 PCDHA6Q9UN73 950 aa12.43□□□□□ -0.42
LINC01550-206ENST00000556462 PCDHA8Q9Y5H6 950 aa12.43□□□□□ -0.42
LINC01550-206ENST00000556462 SPTLC2O15270 562 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 PLA2G6O60733 806 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 STAT2P52630 851 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 PRKG1Q13976 671 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 STK38Q15208 465 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 CDC37Q16543 378 aaPredicted RBP12.42□□□□□ -0.42
LINC01550-206ENST00000556462 NOL9Q5SY16 702 aaKnown RBP12.42□□□□□ -0.42
LINC01550-206ENST00000556462 RASGRP4Q8TDF6 673 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 KCNG4Q8TDN1 519 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
LINC01550-206ENST00000556462 PRR12Q9ULL5 1215 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 PCDHA7Q9UN72 937 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 PCDHB6Q9Y5E3 794 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 ATAD5Q96QE3 1844 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 WNT7AO00755 349 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 GNA11P29992 359 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 SNAP25P60880 206 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 SPP2Q13103 211 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 IKQ13123 557 aaPredicted RBP12.42□□□□□ -0.42
LINC01550-206ENST00000556462 DGKZQ13574 1117 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 EAPPQ56P03 285 aaPredicted RBP12.42□□□□□ -0.42
LINC01550-206ENST00000556462 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.42□□□□□ -0.42
LINC01550-206ENST00000556462 PIK3AP1Q6ZUJ8 805 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 PNMA8AQ86V59 439 aaPredicted RBP12.42□□□□□ -0.42
LINC01550-206ENST00000556462 FEZ1Q99689 392 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 C6orf50Q9HD87 102 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
LINC01550-206ENST00000556462 SCN4AP35499 1836 aa12.41□□□□□ -0.42
LINC01550-206ENST00000556462 ME1P48163 572 aa12.41□□□□□ -0.42
LINC01550-206ENST00000556462 ZNF280CQ8ND82 737 aa12.41□□□□□ -0.42
LINC01550-206ENST00000556462 CHURC1Q8WUH1 139 aa12.41□□□□□ -0.42
LINC01550-206ENST00000556462 LPAR1Q92633 364 aa12.41□□□□□ -0.42
LINC01550-206ENST00000556462 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
LINC01550-206ENST00000556462 ZHX2Q9Y6X8 837 aa12.41□□□□□ -0.42
LINC01550-206ENST00000556462 GOLGA6L4A6NEF3 574 aa12.41□□□□□ -0.42
LINC01550-206ENST00000556462 PPP1R12BO60237 982 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms