RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 SYNPO2Q9UMS6 1093 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 TAF6LQ9Y6J9 622 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 IVNS1ABPQ9Y6Y0 642 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 RANBP2P49792 3224 aaKnown RBP9.59□□□□□ -0.87
VTI1B-206ENST00000556461 COL11A1P12107 1806 aaPredicted RBP9.59□□□□□ -0.88
VTI1B-206ENST00000556461 ZNF213O14771 459 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 SLC25A27O95847 323 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 TFRCP02786 760 aaKnown RBP9.58□□□□□ -0.88
VTI1B-206ENST00000556461 PGK2P07205 417 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 SLC4A3P48751 1232 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 LHX8Q68G74 356 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 SNRNP48Q6IEG0 339 aaKnown RBP9.58□□□□□ -0.88
VTI1B-206ENST00000556461 TTBK2Q6IQ55 1244 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 DPP9Q86TI2 863 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 CPXCR1Q8N123 301 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 PRPF38AQ8NAV1 312 aaKnown RBP9.58□□□□□ -0.88
VTI1B-206ENST00000556461 GMCL1Q96IK5 515 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 MMP19Q99542 508 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 TCP11L1Q9NUJ3 509 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 FEM1BQ9UK73 627 aa9.58□□□□□ -0.88
VTI1B-206ENST00000556461 ISY1Q9ULR0 285 aaKnown RBP9.58□□□□□ -0.88
VTI1B-206ENST00000556461 B4E1Z4 1266 aa9.57□□□□□ -0.88
VTI1B-206ENST00000556461 SGSM2O43147 1006 aa9.57□□□□□ -0.88
VTI1B-206ENST00000556461 STRNO43815 780 aa9.57□□□□□ -0.88
VTI1B-206ENST00000556461 ZBED4O75132 1171 aa9.57□□□□□ -0.88
VTI1B-206ENST00000556461 FARP2O94887 1054 aaPredicted RBP9.57□□□□□ -0.88
VTI1B-206ENST00000556461 TOP1P11387 765 aaKnown RBP9.57□□□□□ -0.88
VTI1B-206ENST00000556461 FCER1AP12319 257 aa9.57□□□□□ -0.88
VTI1B-206ENST00000556461 SLC1A4P43007 532 aa9.57□□□□□ -0.88
VTI1B-206ENST00000556461 PRAMEF19Q5SWL8 479 aa9.57□□□□□ -0.88
VTI1B-206ENST00000556461 TRMT44Q8IYL2 757 aaKnown RBP9.57□□□□□ -0.88
VTI1B-206ENST00000556461 ABRAQ8N0Z2 381 aa9.57□□□□□ -0.88
VTI1B-206ENST00000556461 PIAS4Q8N2W9 510 aaPredicted RBP9.57□□□□□ -0.88
VTI1B-206ENST00000556461 TEX13BQ9BXU2 312 aa9.57□□□□□ -0.88
VTI1B-206ENST00000556461 ZNF536O15090 1300 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 FRMPD2Q68DX3 1309 aaPredicted RBP9.56□□□□□ -0.88
VTI1B-206ENST00000556461 RAD50Q92878 1312 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 ZNF236Q9UL36 1845 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 DNAH12Q6ZR08 3092 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 ATP2A1O14983 1001 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 KDM4AO75164 1064 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 PCP11498 1178 aaKnown RBP9.56□□□□□ -0.88
VTI1B-206ENST00000556461 CYBAP13498 195 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 SLC16A2P36021 539 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 STAT2P52630 851 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 IMMTQ16891 758 aaKnown RBP9.56□□□□□ -0.88
VTI1B-206ENST00000556461 CCDC96Q2M329 555 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 ZNF792Q3KQV3 632 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 PPP4R3BQ5MIZ7 849 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 PRPF38BQ5VTL8 546 aaKnown RBP9.56□□□□□ -0.88
VTI1B-206ENST00000556461 MFSD14CQ5VZR4 134 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 OLFML2BQ68BL8 750 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 CCDC174Q6PII3 467 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 CYB5R4Q7L1T6 521 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 CENPQQ7L2Z9 268 aaPredicted RBP9.56□□□□□ -0.88
VTI1B-206ENST00000556461 ESR2Q92731 530 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 PAWRQ96IZ0 340 aaKnown RBP9.56□□□□□ -0.88
VTI1B-206ENST00000556461 MAML3Q96JK9 1138 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 AGBL1Q96MI9 1066 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 RNF41Q9H4P4 317 aaPredicted RBP9.56□□□□□ -0.88
VTI1B-206ENST00000556461 ZSWIM5Q9P217 1185 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 OGDHLQ9ULD0 1010 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 PRR12Q9ULL5 1215 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 LAMA4Q16363 1823 aa9.56□□□□□ -0.88
VTI1B-206ENST00000556461 PLA2G6O60733 806 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 CYP21A2P08686 494 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 PDHBP11177 359 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 IKQ13123 557 aaPredicted RBP9.55□□□□□ -0.88
VTI1B-206ENST00000556461 ANO1Q5XXA6 986 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 STOX1Q6ZVD7 989 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 FAM160B2Q86V87 743 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 CHURC1Q8WUH1 139 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 DCAF4Q8WV16 495 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 FGD4Q96M96 766 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 CPVLQ9H3G5 476 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 GPCPD1Q9NPB8 672 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 HOMER2Q9NSB8 354 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 CTNNA3Q9UI47 895 aa9.55□□□□□ -0.88
VTI1B-206ENST00000556461 DNAJC25-GNG10A0A024R161 153 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 GOLGA8HP0CJ92 632 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 SNHG28P0DPA3 235 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 CNGA1P29973 690 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 COPB2P35606 906 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 OAZ1P54368 228 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 ZNF543Q08ER8 600 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 COL9A3Q14050 684 aaPredicted RBP9.54□□□□□ -0.88
VTI1B-206ENST00000556461 KCTD2Q14681 263 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 MUM1L1Q5H9M0 696 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 SYDE2Q5VT97 1194 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 BTNL9Q6UXG8 535 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 ENAHQ8N8S7 591 aaPredicted RBP9.54□□□□□ -0.88
VTI1B-206ENST00000556461 RUFY2Q8WXA3 655 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 ANKS1AQ92625 1134 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 TTC14Q96N46 770 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 ZSCAN10Q96SZ4 725 aaPredicted RBP9.54□□□□□ -0.88
VTI1B-206ENST00000556461 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 PCDH10Q9P2E7 1040 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 DDX20Q9UHI6 824 aaKnown RBP9.54□□□□□ -0.88
VTI1B-206ENST00000556461 CTDP1Q9Y5B0 961 aaPredicted RBP9.54□□□□□ -0.88
VTI1B-206ENST00000556461 DDX49Q9Y6V7 483 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms