RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 FANCBQ8NB91 859 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 ZNF496Q96IT1 587 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-216ENST00000556083 GSDMAQ96QA5 445 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 VPS16Q9H269 839 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 PSTPIP2Q9H939 334 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 STAP2Q9UGK3 403 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 PCDHA12Q9UN75 941 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 ADGRL3Q9HAR2 1447 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 ABCA5Q8WWZ7 1642 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 CASQ2O14958 399 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-216ENST00000556083 CD19P15391 556 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-216ENST00000556083 CAPZA3Q96KX2 299 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 VPS18Q9P253 973 aa11.81□□□□□ -0.52
ACTN1-216ENST00000556083 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
ACTN1-216ENST00000556083 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-216ENST00000556083 MYOM2P54296 1465 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 BRD1O95696 1058 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 SCG2P13521 617 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 PTPREP23469 700 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 CCHCR1Q8TD31 782 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 TSC1Q92574 1164 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 RAB20Q9NX57 234 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 THRAP3Q9Y2W1 955 aaKnown RBP11.8□□□□□ -0.52
ACTN1-216ENST00000556083 HYOU1Q9Y4L1 999 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 RNASELQ05823 741 aaKnown RBP11.8□□□□□ -0.52
ACTN1-216ENST00000556083 TRIM42Q8IWZ5 723 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 MRFAP1L1Q96HT8 127 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 AMNQ9BXJ7 453 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 MLXIPQ9HAP2 919 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 NLRP1Q9C000 1473 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 RIOK3O14730 519 aaKnown RBP11.8□□□□□ -0.52
ACTN1-216ENST00000556083 CFBP00751 764 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 C10orf76Q5T2E6 689 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 GLG1Q92896 1179 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 IFIH1Q9BYX4 1025 aaKnown RBP11.8□□□□□ -0.52
ACTN1-216ENST00000556083 NUF2Q9BZD4 464 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 FOXP1Q9H334 677 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-216ENST00000556083 OSBPL3Q9H4L5 887 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 CHST3Q7LGC8 479 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 RBSNQ9H1K0 784 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
ACTN1-216ENST00000556083 ZEB2O60315 1214 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 ZAP70P43403 619 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 ANKRD20A3Q5VUR7 823 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 ZNF772Q68DY9 489 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-216ENST00000556083 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 CCDC105Q8IYK2 499 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 IFNL3Q8IZI9 196 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 ZSWIM6Q9HCJ5 1215 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 ARHGAP31Q2M1Z3 1444 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 NDUFAB1O14561 156 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 ATP8B1O43520 1251 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 CEP104O60308 925 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 PPP6R2O75170 966 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 TNNI1P19237 187 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 HSPA1LP34931 641 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 LIG4P49917 911 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 RASA3Q14644 834 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 TTC31Q49AM3 519 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-216ENST00000556083 DENND2CQ68D51 928 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 MCUR1Q96AQ8 359 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 FAN1Q9Y2M0 1017 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 EEF1GP26641 437 aaKnown RBP11.79□□□□□ -0.52
ACTN1-216ENST00000556083 GARSP41250 739 aaKnown RBP11.79□□□□□ -0.52
ACTN1-216ENST00000556083 KPNA2P52292 529 aaKnown RBP11.79□□□□□ -0.52
ACTN1-216ENST00000556083 ARHGAP4P98171 946 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 ORC2Q13416 577 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-216ENST00000556083 CERKLQ49MI3 558 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-216ENST00000556083 ARHGEF16Q5VV41 709 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 PPP4R1Q8TF05 950 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.79□□□□□ -0.52
ACTN1-216ENST00000556083 CDKL2Q92772 493 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 DHTKD1Q96HY7 919 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-216ENST00000556083 SAR1BQ9Y6B6 198 aa11.79□□□□□ -0.52
ACTN1-216ENST00000556083 CHMP2AO43633 222 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 RNF8O76064 485 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 RHOXF2BP0C7M4 288 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 LMNB1P20700 586 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 DMP1Q13316 513 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-216ENST00000556083 SULF1Q8IWU6 871 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 PNMA1Q8ND90 353 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 NACC1Q96RE7 527 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 RHOXF2Q9BQY4 288 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.78□□□□□ -0.52
ACTN1-216ENST00000556083 ANKARQ7Z5J8 1434 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 MLH3Q9UHC1 1453 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 PDE6AP16499 860 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 SPATA1Q5VX52 437 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 DCPSQ96C86 337 aaKnown RBP11.78□□□□□ -0.52
ACTN1-216ENST00000556083 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 TMEM206Q9H813 350 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 CCPG1Q9ULG6 757 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 ATP8B3O60423 1300 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 EVI5O60447 810 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 PDE6CP51160 858 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 PSMD2Q13200 908 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 ZNF449Q6P9G9 518 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 G2E3Q7L622 706 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms