RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PURBQ96QR8 312 aaKnown RBP9.62□□□□□ -0.87
ATXN3-235ENST00000556082 EYA3Q99504 573 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 MAP3K14Q99558 947 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 ALG1Q9BT22 464 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 MRIQ9BWK5 157 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 RTFDC1Q9BY42 306 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-235ENST00000556082 ZC3H12CQ9C0D7 883 aaKnown RBP9.62□□□□□ -0.87
ATXN3-235ENST00000556082 TOMM22Q9NS69 142 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 TCP11L1Q9NUJ3 509 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 RBM28Q9NW13 759 aaKnown RBP9.62□□□□□ -0.87
ATXN3-235ENST00000556082 STK32BQ9NY57 414 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 KIAA1551Q9HCM1 1747 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 TNKSO95271 1327 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 CYP2D7A0A087X1C5 515 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 GOLGA6L4A6NEF3 574 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 H0YIN7 160 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 RANBP6O60518 1105 aaKnown RBP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 YEATS4O95619 227 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 U2AF2P26368 475 aaKnown RBP eCLIP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 NASPP49321 788 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 FKBP1AP62942 108 aaKnown RBP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 KIF23Q02241 960 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 TROAPQ12815 778 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 MFSD14BQ5SR56 506 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 LCE2CQ5TA81 110 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 DPP8Q6V1X1 898 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 CATIPQ7Z7H3 387 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 SLC51AQ86UW1 340 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 DGKHQ86XP1 1220 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 AMOTL1Q8IY63 956 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 TRIM22Q8IYM9 498 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 SH3RF3Q8TEJ3 882 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 PGBD1Q96JS3 809 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 GPR101Q96P66 508 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 RNF26Q9BY78 433 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 RBSNQ9H1K0 784 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 KDM4CQ9H3R0 1056 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 TSPY26PQ9H489 355 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 ZNF287Q9HBT7 754 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 DDX19AQ9NUU7 478 aaKnown RBP9.61□□□□□ -0.87
ATXN3-235ENST00000556082 MCM9Q9NXL9 1143 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 GPSM3Q9Y4H4 160 aa9.61□□□□□ -0.87
ATXN3-235ENST00000556082 A0A1W2PQ27 194 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 A0A1W2PQ64 194 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 A0A1W2PQD8 194 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 PRPF3O43395 683 aaKnown RBP9.6□□□□□ -0.87
ATXN3-235ENST00000556082 DEXIO95424 95 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 USP5P45974 858 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 RHBDL3P58872 404 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 TRIM29Q14134 588 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 IFIT1BQ5T764 474 aaKnown RBP9.6□□□□□ -0.87
ATXN3-235ENST00000556082 KRT40Q6A162 431 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 RBM43Q6ZSC3 357 aaKnown RBP9.6□□□□□ -0.87
ATXN3-235ENST00000556082 PODNQ7Z5L7 613 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 C2CD5Q86YS7 1000 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 PNMA1Q8ND90 353 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 KCNG4Q8TDN1 519 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 C7orf43Q8WVR3 580 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 CNKSR1Q969H4 720 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 USP28Q96RU2 1077 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 PPP1R9BQ96SB3 815 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 ZKSCAN3Q9BRR0 538 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 FKBPLQ9UIM3 349 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 JAG2Q9Y219 1238 aa9.6□□□□□ -0.87
ATXN3-235ENST00000556082 ANKRD31Q8N7Z5 1873 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 TNS1Q9HBL0 1735 aaKnown RBP9.59□□□□□ -0.87
ATXN3-235ENST00000556082 SMIM22K7EJ46 135 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 USP17L8P0C7I0 530 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 CYP2D6P10635 497 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 BTDP43251 543 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 GTF2IP78347 998 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 HDLBPQ00341 1268 aaKnown RBP9.59□□□□□ -0.87
ATXN3-235ENST00000556082 GUCY1B3Q02153 619 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 ADALQ6DHV7 355 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 HHIPL2Q6UWX4 724 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 RAB11FIP4Q86YS3 637 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 CCDC116Q8IYX3 515 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 LINC00301Q8NCQ3 95 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 PHKBQ93100 1093 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 TSEN34Q9BSV6 310 aaKnown RBP9.59□□□□□ -0.87
ATXN3-235ENST00000556082 FUCA2Q9BTY2 467 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 SLC26A6Q9BXS9 759 aa9.59□□□□□ -0.87
ATXN3-235ENST00000556082 FOXP1Q9H334 677 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-235ENST00000556082 MORC2Q9Y6X9 1032 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-235ENST00000556082 CCDC88AQ3V6T2 1871 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 CTAGE5O15320 804 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 MAN1A2O60476 641 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 PRDM1O75626 825 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 LIG1P18858 919 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 RXRAP19793 462 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 NOVP48745 357 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 CCDC173Q0VFZ6 552 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 SLC39A14Q15043 492 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 SAFBQ15424 915 aaKnown RBP eCLIP9.58□□□□□ -0.88
ATXN3-235ENST00000556082 EZH2Q15910 746 aaKnown RBP9.58□□□□□ -0.88
ATXN3-235ENST00000556082 ANO1Q5XXA6 986 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms