RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 PRRT2Q7Z6L0 340 aaPredicted RBP8.85□□□□□ -0.99
PCNX4-211ENST00000555929 CCDC82Q8N4S0 544 aa8.85□□□□□ -0.99
PCNX4-211ENST00000555929 CTCFLQ8NI51 663 aaPredicted RBP8.85□□□□□ -0.99
PCNX4-211ENST00000555929 ANKS1AQ92625 1134 aa8.85□□□□□ -0.99
PCNX4-211ENST00000555929 RPAP3Q9H6T3 665 aaPredicted RBP8.85□□□□□ -0.99
PCNX4-211ENST00000555929 VAT1LQ9HCJ6 419 aa8.85□□□□□ -0.99
PCNX4-211ENST00000555929 BRPF3Q9ULD4 1205 aa8.85□□□□□ -0.99
PCNX4-211ENST00000555929 CTDP1Q9Y5B0 961 aaPredicted RBP8.85□□□□□ -0.99
PCNX4-211ENST00000555929 LAMB1P07942 1786 aa8.85□□□□□ -0.99
PCNX4-211ENST00000555929 MANSC4A6NHS7 340 aaPredicted RBP8.84□□□□□ -0.99
PCNX4-211ENST00000555929 BTBD19C9JJ37 291 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 ZBTB43O43298 467 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 CALM1P0DP23 149 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 CALM2P0DP24 149 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 CALM3P0DP25 149 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 BMP3P12645 472 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 OSBPP22059 807 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 SLC16A2P36021 539 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 PBX2P40425 430 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 NOVP48745 357 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 METAP2P50579 478 aaKnown RBP eCLIP8.84□□□□□ -0.99
PCNX4-211ENST00000555929 IRX3P78415 501 aaPredicted RBP8.84□□□□□ -0.99
PCNX4-211ENST00000555929 SREBF2Q12772 1141 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 NOGQ13253 232 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 SH3D19Q5HYK7 790 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 TTBK2Q6IQ55 1244 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 APOA5Q6Q788 366 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 SGMS1Q86VZ5 419 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 GMCL1P1Q8NEA9 526 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 DCAF4Q8WV16 495 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 PIBF1Q8WXW3 757 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 BRI3BPQ8WY22 251 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 LPAR1Q92633 364 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 IL17RAQ96F46 866 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 UBA5Q9GZZ9 404 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 SLKQ9H2G2 1235 aaPredicted RBP8.84□□□□□ -0.99
PCNX4-211ENST00000555929 TPCN1Q9ULQ1 816 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 PCDHGA4Q9Y5G9 962 aa8.84□□□□□ -0.99
PCNX4-211ENST00000555929 USP17L15C9J2P7 530 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 USP17L13C9JLJ4 530 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 USP17L11C9JVI0 530 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 USP17L18D6R9N7 530 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 USP17L22D6RA61 530 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 USP17L17D6RBQ6 530 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 USP17L19D6RCP7 530 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 USP17L20D6RJB6 530 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 PDHXO00330 501 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 CPLX1O14810 134 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 WDR46O15213 610 aaKnown RBP8.83□□□□□ -1
PCNX4-211ENST00000555929 PPFIA3O75145 1194 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 FLOT1O75955 427 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 DDAH1O94760 285 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 PDHBP11177 359 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 PDIA3P30101 505 aaKnown RBP8.83□□□□□ -1
PCNX4-211ENST00000555929 KIF5BP33176 963 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 SLC4A3P48751 1232 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 SNAP25P60880 206 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 USP17L24Q0WX57 530 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 PABPC4Q13310 644 aaKnown RBP eCLIP8.83□□□□□ -1
PCNX4-211ENST00000555929 OTUD7BQ6GQQ9 843 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 CMTR1Q8N1G2 835 aaKnown RBP8.83□□□□□ -1
PCNX4-211ENST00000555929 FAM43AQ8N2R8 423 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 STAG2Q8N3U4 1231 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 NECAB1Q8N987 351 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 FANCBQ8NB91 859 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 PROCA1Q8NCQ7 364 aaPredicted RBP8.83□□□□□ -1
PCNX4-211ENST00000555929 KIFC2Q96AC6 838 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 GMCL1Q96IK5 515 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 PTPN18Q99952 460 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 ALDH8A1Q9H2A2 487 aaPredicted RBP8.83□□□□□ -1
PCNX4-211ENST00000555929 CPVLQ9H3G5 476 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 NCOA5Q9HCD5 579 aaKnown RBP8.83□□□□□ -1
PCNX4-211ENST00000555929 LIMCH1Q9UPQ0 1083 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 AGTPBP1Q9UPW5 1226 aa8.83□□□□□ -1
PCNX4-211ENST00000555929 KLRF2D3W0D1 207 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 IGF2BP3O00425 579 aaKnown RBP eCLIP8.82□□□□□ -1
PCNX4-211ENST00000555929 DTNBO60941 627 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 PPP1R37O75864 691 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 CD2BP2O95400 341 aaKnown RBP8.82□□□□□ -1
PCNX4-211ENST00000555929 CYP2C8P10632 490 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
PCNX4-211ENST00000555929 STAT2P52630 851 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 INHBEP58166 350 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 LSM11P83369 360 aaKnown RBP eCLIP8.82□□□□□ -1
PCNX4-211ENST00000555929 ZNF543Q08ER8 600 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 TROAPQ12815 778 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 MOGSQ13724 837 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 GRM4Q14833 912 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 ME3Q16798 604 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 RTN1Q16799 776 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 ASPRV1Q53RT3 343 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 GPATCH4Q5T3I0 446 aaKnown RBP8.82□□□□□ -1
PCNX4-211ENST00000555929 GPAT2Q6NUI2 795 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 CATSPERGQ6ZRH7 1159 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 ANKRD23Q86SG2 305 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 HSCBQ8IWL3 235 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 HS6ST3Q8IZP7 471 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 SMCR8Q8TEV9 937 aaPredicted RBP8.82□□□□□ -1
PCNX4-211ENST00000555929 CHURC1Q8WUH1 139 aa8.82□□□□□ -1
PCNX4-211ENST00000555929 ZNF274Q96GC6 653 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms