RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-218	ENST00000555628	CYP2E1	P05181	493 aa	Predicted RBP	11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	CLTB	P09497	229 aa		11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	ADGRE1	Q14246	886 aa		11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	ZYX	Q15942	572 aa	Known RBP	11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	ANKRD33	Q7Z3H0	272 aa		11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	SHCBP1	Q8NEM2	672 aa		11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	ADAMTS19	Q8TE59	1207 aa		11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	FERMT2	Q96AC1	680 aa		11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	SAP30BP	Q9UHR5	308 aa	Known RBP	11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	TACC3	Q9Y6A5	838 aa		11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	GBF1	Q92538	1859 aa		11.17	□□□□□ -0.62
PRKCH-218	ENST00000555628	STRN	O43815	780 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	SHMT1	P34896	483 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	FAAP100	Q0VG06	881 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	KIAA1755	Q5JYT7	1200 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	PRAMEF19	Q5SWL8	479 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	WDR78	Q5VTH9	848 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	NAA16	Q6N069	864 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	C16orf59	Q7L2K0	433 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	ABRA	Q8N0Z2	381 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	TIFA	Q96CG3	184 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	MAML3	Q96JK9	1138 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	SPATC1L	Q9H0A9	340 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	TBX21	Q9UL17	535 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	IVNS1ABP	Q9Y6Y0	642 aa		11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	COL11A1	P12107	1806 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKCH-218	ENST00000555628	NAV1	Q8NEY1	1877 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628		A0A1W2PQ45	241 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628		A0A1W2PQY0	241 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628		A0A1W2PRG0	241 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	SRGAP3	O43295	1099 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	IGSF3	O75054	1194 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	ADAMTS4	O75173	837 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	BAG3	O95817	575 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	ERCC3	P19447	782 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	USP14	P54578	494 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	DYNLL1	P63167	89 aa	Known RBP	11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	FPGS	Q05932	587 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	GABPA	Q06546	454 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	MAP3K12	Q12852	859 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	TRMT2A	Q8IZ69	625 aa	Known RBP	11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	TOX2	Q96NM4	488 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	FEZ1	Q99689	392 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	PBX4	Q9BYU1	374 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	PIH1D3	Q9NQM4	214 aa	Known RBP	11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	LRP2BP	Q9P2M1	347 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	THEG	Q9P2T0	379 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	NRBP1	Q9UHY1	535 aa		11.15	□□□□□ -0.62
PRKCH-218	ENST00000555628	MUC6	Q6W4X9	2439 aa		11.15	□□□□□ -0.63
PRKCH-218	ENST00000555628		E9PSI1	815 aa		11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	UQCRFS1P1	P0C7P4	283 aa		11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	SLFN5	Q08AF3	891 aa		11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	ZNF516	Q92618	1163 aa		11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	NEUROD6	Q96NK8	337 aa		11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	UHRF1	Q96T88	793 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	CWC22	Q9HCG8	908 aa	Known RBP	11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	SNRK	Q9NRH2	765 aa		11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	SMC4	Q9NTJ3	1288 aa		11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	SERPINB13	Q9UIV8	391 aa		11.14	□□□□□ -0.63
PRKCH-218	ENST00000555628	WDFY4	Q6ZS81	3184 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	PNMA6E	A0A0J9YXQ4	647 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	HLA-DOA	P06340	250 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	TAL1	P17542	331 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	KCNC4	Q03721	635 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	RAB3GAP1	Q15042	981 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	TMEM240	Q5SV17	173 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	DPP9	Q86TI2	863 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	LENG1	Q96BZ8	264 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	FAM122A	Q96E09	287 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	MTR	Q99707	1265 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	PRDM12	Q9H4Q4	367 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	GPR108	Q9NPR9	543 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	XPNPEP3	Q9NQH7	507 aa		11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	DAXX	Q9UER7	740 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	NOB1	Q9ULX3	412 aa	Known RBP	11.13	□□□□□ -0.63
PRKCH-218	ENST00000555628	TCF20	Q9UGU0	1960 aa	Known RBP	11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	GRXCR1	A8MXD5	290 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	PQBP1	O60828	265 aa	Known RBP	11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	ZMYND10	O75800	440 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	PGK1	P00558	417 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	TIMP1	P01033	207 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	BMP1	P13497	986 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	RAG1	P15918	1043 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	PLCD1	P51178	756 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	MRPS5	P82675	430 aa	Known RBP	11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	COG2	Q14746	738 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	SEPT2	Q15019	361 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	ABCB5	Q2M3G0	1257 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	ATF7IP	Q6VMQ6	1270 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	SIAH1	Q8IUQ4	282 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	MB21D1	Q8N884	522 aa		11.12	□□□□□ -0.63
PRKCH-218	ENST00000555628	KLHDC9	Q8NEP7	349 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms