RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 NAPGQ99747 312 aaPredicted RBP18.23■□□□□ 0.51
TUBB3-209ENST00000555609 CCSER1Q9C0I3 900 aa18.23■□□□□ 0.51
TUBB3-209ENST00000555609 THAP9Q9H5L6 903 aa18.23■□□□□ 0.51
TUBB3-209ENST00000555609 LZTFL1Q9NQ48 299 aa18.23■□□□□ 0.51
TUBB3-209ENST00000555609 KAT6BQ8WYB5 2073 aa18.23■□□□□ 0.51
TUBB3-209ENST00000555609 MYH14Q7Z406 1995 aaKnown RBP18.23■□□□□ 0.51
TUBB3-209ENST00000555609 SMIM22K7EJ46 135 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 RXRBP28702 533 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 CASP1P29466 404 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 PRPHP41219 470 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 STAT6P42226 847 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 GPS2Q13227 327 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 KIF4BQ2VIQ3 1234 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 DTHD1Q6ZMT9 781 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 SMYD4Q8IYR2 804 aaPredicted RBP18.22■□□□□ 0.51
TUBB3-209ENST00000555609 ADSSL1Q8N142 457 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 GJD4Q96KN9 370 aaPredicted RBP18.22■□□□□ 0.51
TUBB3-209ENST00000555609 MTRQ99707 1265 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 DISC1Q9NRI5 854 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 BAZ2AQ9UIF9 1905 aaKnown RBP18.22■□□□□ 0.51
TUBB3-209ENST00000555609 SMC1AQ14683 1233 aaKnown RBP18.22■□□□□ 0.51
TUBB3-209ENST00000555609 GRM4Q14833 912 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 RCSD1Q6JBY9 416 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 BARGINQ6ZT62 677 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 NUP88Q99567 741 aaPredicted RBP18.22■□□□□ 0.51
TUBB3-209ENST00000555609 FUT8Q9BYC5 575 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 BLZF1Q9H2G9 400 aa18.22■□□□□ 0.51
TUBB3-209ENST00000555609 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.22■□□□□ 0.51
TUBB3-209ENST00000555609 COL5A3P25940 1745 aaPredicted RBP18.21■□□□□ 0.51
TUBB3-209ENST00000555609 M0R2N6 131 aa18.21■□□□□ 0.51
TUBB3-209ENST00000555609 MAP2K7O14733 419 aa18.21■□□□□ 0.51
TUBB3-209ENST00000555609 SEC31AO94979 1220 aaKnown RBP18.21■□□□□ 0.51
TUBB3-209ENST00000555609 FAM98CQ17RN3 349 aaKnown RBP18.21■□□□□ 0.51
TUBB3-209ENST00000555609 LONRF2Q1L5Z9 754 aa18.21■□□□□ 0.51
TUBB3-209ENST00000555609 NOM1Q5C9Z4 860 aaKnown RBP18.21■□□□□ 0.51
TUBB3-209ENST00000555609 CERS3Q8IU89 383 aa18.21■□□□□ 0.51
TUBB3-209ENST00000555609 AK8Q96MA6 479 aa18.21■□□□□ 0.51
TUBB3-209ENST00000555609 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
TUBB3-209ENST00000555609 CNTNAP4Q9C0A0 1308 aa18.21■□□□□ 0.51
TUBB3-209ENST00000555609 ROBO3Q96MS0 1386 aa18.21■□□□□ 0.51
TUBB3-209ENST00000555609 COL4A1P02462 1669 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 CCDC194A0A1B0GVG4 234 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 HOXA7P31268 230 aaPredicted RBP18.2■□□□□ 0.5
TUBB3-209ENST00000555609 CCT6AP40227 531 aaKnown RBP18.2■□□□□ 0.5
TUBB3-209ENST00000555609 ERVK-24P63145 666 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 TSR1Q2NL82 804 aaKnown RBP18.2■□□□□ 0.5
TUBB3-209ENST00000555609 FAM47AQ5JRC9 791 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 TXLNBQ8N3L3 684 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 OR8K1Q8NGG5 319 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 CELF1Q92879 486 aaKnown RBP18.2■□□□□ 0.5
TUBB3-209ENST00000555609 CCDC47Q96A33 483 aaKnown RBP18.2■□□□□ 0.5
TUBB3-209ENST00000555609 IQCDQ96DY2 449 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 ACSBG1Q96GR2 724 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 DHTKD1Q96HY7 919 aaPredicted RBP18.2■□□□□ 0.5
TUBB3-209ENST00000555609 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 NUP58Q9BVL2 599 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 ST7Q9NRC1 585 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 PSD3Q9NYI0 1048 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 SPATA31A5Q5VU36 1347 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 SPATA31A7Q8IWB4 1347 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 A0A0G2JS52 829 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 LGALS16A8MUM7 142 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 SASH3O75995 380 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 RHOBTB3O94955 611 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 PARP1P09874 1014 aaKnown RBP18.2■□□□□ 0.5
TUBB3-209ENST00000555609 KRT9P35527 623 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 PRCPP42785 496 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 C12orf60Q5U649 245 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 C3orf67Q6ZVT6 689 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 HDXQ7Z353 690 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 AMOTL1Q8IY63 956 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 RETREG2Q8NC44 543 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 VPS16Q9H269 839 aa18.2■□□□□ 0.5
TUBB3-209ENST00000555609 EP400Q96L91 3159 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 CTAGE15A4D2H0 777 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 PSMA7O14818 248 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 CTAGE8P0CG41 777 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 ARHGAP25P42331 645 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 GSTO1P78417 241 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 UBXN1Q04323 297 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 ORC2Q13416 577 aaPredicted RBP18.19■□□□□ 0.5
TUBB3-209ENST00000555609 CTAGE6Q86UF2 777 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 CTAGE4Q8IX94 777 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 SLC35F6Q8N357 371 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 MB21D1Q8N884 522 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 DNAJC7Q99615 494 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 IRX2Q9BZI1 471 aaPredicted RBP18.19■□□□□ 0.5
TUBB3-209ENST00000555609 HAUS4Q9H6D7 363 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 TAB2Q9NYJ8 693 aa18.19■□□□□ 0.5
TUBB3-209ENST00000555609 MAGEC2Q9UBF1 373 aaPredicted RBP18.19■□□□□ 0.5
TUBB3-209ENST00000555609 EPN1Q9Y6I3 576 aaPredicted RBP18.19■□□□□ 0.5
TUBB3-209ENST00000555609 OAS2P29728 719 aaKnown RBP18.18■□□□□ 0.5
TUBB3-209ENST00000555609 DNM2P50570 870 aa18.18■□□□□ 0.5
TUBB3-209ENST00000555609 RC3H1Q5TC82 1133 aaKnown RBP18.18■□□□□ 0.5
TUBB3-209ENST00000555609 PNMA1Q8ND90 353 aa18.18■□□□□ 0.5
TUBB3-209ENST00000555609 EHBP1Q8NDI1 1231 aa18.18■□□□□ 0.5
TUBB3-209ENST00000555609 STAMQ92783 540 aa18.18■□□□□ 0.5
TUBB3-209ENST00000555609 KBTBD4Q9NVX7 518 aa18.18■□□□□ 0.5
TUBB3-209ENST00000555609 MKRN1Q9UHC7 482 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms